data_4OYV # _model_server_result.job_id -y7S6hREQ94XG7Gci8D3Mg _model_server_result.datetime_utc '2024-11-12 20:48:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4oyv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 4OYV # _exptl.entry_id 4OYV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 131.173 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description LEUCINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4OYV _cell.length_a 53.616 _cell.length_b 82.495 _cell.length_c 89.842 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OYV _symmetry.cell_setting . _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H13 N O2' _chem_comp.formula_weight 131.173 _chem_comp.id LEU _chem_comp.mon_nstd_flag y _chem_comp.name LEUCINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA LEU sing 160 n n N H LEU sing 161 n n N H2 LEU sing 162 n n CA C LEU sing 163 n n CA CB LEU sing 164 n n CA HA LEU sing 165 n n C O LEU doub 166 n n C OXT LEU sing 167 n n CB CG LEU sing 168 n n CB HB2 LEU sing 169 n n CB HB3 LEU sing 170 n n CG CD1 LEU sing 171 n n CG CD2 LEU sing 172 n n CG HG LEU sing 173 n n CD1 HD11 LEU sing 174 n n CD1 HD12 LEU sing 175 n n CD1 HD13 LEU sing 176 n n CD2 HD21 LEU sing 177 n n CD2 HD22 LEU sing 178 n n CD2 HD23 LEU sing 179 n n OXT HXT LEU sing 180 n n # _atom_sites.entry_id 4OYV _atom_sites.fract_transf_matrix[1][1] 0.018651 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012122 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011131 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LEU A 1 501 1 LEU LEU . C 3 CL A 1 502 1 CL CL . D 4 HOH A 1 601 26 HOH HOH . D 4 HOH A 2 602 21 HOH HOH . D 4 HOH A 3 603 44 HOH HOH . D 4 HOH A 4 604 22 HOH HOH . D 4 HOH A 5 605 30 HOH HOH . D 4 HOH A 6 606 107 HOH HOH . D 4 HOH A 7 607 62 HOH HOH . D 4 HOH A 8 608 6 HOH HOH . D 4 HOH A 9 609 105 HOH HOH . D 4 HOH A 10 610 54 HOH HOH . D 4 HOH A 11 611 3 HOH HOH . D 4 HOH A 12 612 33 HOH HOH . D 4 HOH A 13 613 151 HOH HOH . D 4 HOH A 14 614 49 HOH HOH . D 4 HOH A 15 615 143 HOH HOH . D 4 HOH A 16 616 29 HOH HOH . D 4 HOH A 17 617 11 HOH HOH . D 4 HOH A 18 618 72 HOH HOH . D 4 HOH A 19 619 109 HOH HOH . D 4 HOH A 20 620 67 HOH HOH . D 4 HOH A 21 621 19 HOH HOH . D 4 HOH A 22 622 145 HOH HOH . D 4 HOH A 23 623 157 HOH HOH . D 4 HOH A 24 624 45 HOH HOH . D 4 HOH A 25 625 14 HOH HOH . D 4 HOH A 26 626 64 HOH HOH . D 4 HOH A 27 627 91 HOH HOH . D 4 HOH A 28 628 16 HOH HOH . D 4 HOH A 29 629 127 HOH HOH . D 4 HOH A 30 630 88 HOH HOH . D 4 HOH A 31 631 53 HOH HOH . D 4 HOH A 32 632 63 HOH HOH . D 4 HOH A 33 633 24 HOH HOH . D 4 HOH A 34 634 52 HOH HOH . D 4 HOH A 35 635 131 HOH HOH . D 4 HOH A 36 636 28 HOH HOH . D 4 HOH A 37 637 12 HOH HOH . D 4 HOH A 38 638 94 HOH HOH . D 4 HOH A 39 639 81 HOH HOH . D 4 HOH A 40 640 1 HOH HOH . D 4 HOH A 41 641 2 HOH HOH . D 4 HOH A 42 642 4 HOH HOH . D 4 HOH A 43 643 5 HOH HOH . D 4 HOH A 44 644 7 HOH HOH . D 4 HOH A 45 645 9 HOH HOH . D 4 HOH A 46 646 10 HOH HOH . D 4 HOH A 47 647 15 HOH HOH . D 4 HOH A 48 648 18 HOH HOH . D 4 HOH A 49 649 20 HOH HOH . D 4 HOH A 50 650 23 HOH HOH . D 4 HOH A 51 651 32 HOH HOH . D 4 HOH A 52 652 34 HOH HOH . D 4 HOH A 53 653 35 HOH HOH . D 4 HOH A 54 654 37 HOH HOH . D 4 HOH A 55 655 38 HOH HOH . D 4 HOH A 56 656 39 HOH HOH . D 4 HOH A 57 657 40 HOH HOH . D 4 HOH A 58 658 42 HOH HOH . D 4 HOH A 59 659 50 HOH HOH . D 4 HOH A 60 660 55 HOH HOH . D 4 HOH A 61 661 56 HOH HOH . D 4 HOH A 62 662 61 HOH HOH . D 4 HOH A 63 663 68 HOH HOH . D 4 HOH A 64 664 75 HOH HOH . D 4 HOH A 65 665 83 HOH HOH . D 4 HOH A 66 666 85 HOH HOH . D 4 HOH A 67 667 89 HOH HOH . D 4 HOH A 68 668 90 HOH HOH . D 4 HOH A 69 669 98 HOH HOH . D 4 HOH A 70 670 110 HOH HOH . D 4 HOH A 71 671 113 HOH HOH . D 4 HOH A 72 672 114 HOH HOH . D 4 HOH A 73 673 121 HOH HOH . D 4 HOH A 74 674 125 HOH HOH . D 4 HOH A 75 675 128 HOH HOH . D 4 HOH A 76 676 129 HOH HOH . D 4 HOH A 77 677 134 HOH HOH . D 4 HOH A 78 678 139 HOH HOH . D 4 HOH A 79 679 147 HOH HOH . D 4 HOH A 80 680 149 HOH HOH . D 4 HOH A 81 681 164 HOH HOH . D 4 HOH A 82 682 176 HOH HOH . D 4 HOH A 83 683 177 HOH HOH . D 4 HOH A 84 684 178 HOH HOH . D 4 HOH A 85 685 179 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N LEU . . . B 2 -4.49 -10.362 7.998 1 24.5 ? N LEU 501 A 1 HETATM 2 C CA LEU . . . B 2 -4.752 -11.722 8.584 1 26.16 ? CA LEU 501 A 1 HETATM 3 C C LEU . . . B 2 -4.014 -12.735 7.739 1 27.06 ? C LEU 501 A 1 HETATM 4 O O LEU . . . B 2 -3.701 -12.451 6.574 1 23.98 ? O LEU 501 A 1 HETATM 5 C CB LEU . . . B 2 -6.258 -12.038 8.656 1 25.59 ? CB LEU 501 A 1 HETATM 6 C CG LEU . . . B 2 -6.761 -13.263 9.439 1 25.49 ? CG LEU 501 A 1 HETATM 7 C CD1 LEU . . . B 2 -6.768 -13.025 10.941 1 26.83 ? CD1 LEU 501 A 1 HETATM 8 C CD2 LEU . . . B 2 -8.162 -13.648 9.003 1 25.64 ? CD2 LEU 501 A 1 HETATM 9 O OXT LEU . . . B 2 -3.682 -13.834 8.223 1 30.73 ? OXT LEU 501 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 9 #