data_4OZH # _model_server_result.job_id 6p0dzt8PyS7MoysMtW-kpw _model_server_result.datetime_utc '2024-11-17 19:33:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ozh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":301}' # _entry.id 4OZH # _exptl.entry_id 4OZH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.05 _cell.angle_gamma 90 _cell.entry_id 4OZH _cell.length_a 261.569 _cell.length_b 57.87 _cell.length_c 137.411 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OZH _symmetry.cell_setting . _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA pentameric 5 software_defined_assembly 1 PISA pentameric 5 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,G,H,J,K,L,N,O,P,U,V 1 1 C,D,E,F,I,M,Q,R,S,T 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id N _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 109 A CYS 107 1_555 A SG CYS 165 A CYS 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 B SG CYS 28 B CYS 15 1_555 B SG CYS 92 B CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf3 B SG CYS 130 B CYS 117 1_555 B SG CYS 186 B CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf4 C SG CYS 109 C CYS 107 1_555 C SG CYS 165 C CYS 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf5 D SG CYS 28 D CYS 15 1_555 D SG CYS 92 D CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf6 D SG CYS 130 D CYS 117 1_555 D SG CYS 186 D CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf7 E SG CYS 21 E CYS 23 1_555 E SG CYS 87 E CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf8 E SG CYS 132 E CYS 151 1_555 E SG CYS 182 E CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf9 E SG CYS 157 E CYS 176 1_555 F SG CYS 168 F CYS 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf10 F SG CYS 21 F CYS 23 1_555 F SG CYS 90 F CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf11 F SG CYS 142 F CYS 158 1_555 F SG CYS 207 F CYS 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf12 G SG CYS 21 G CYS 23 1_555 G SG CYS 87 G CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf13 G SG CYS 132 G CYS 151 1_555 G SG CYS 182 G CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf14 G SG CYS 157 G CYS 176 1_555 H SG CYS 168 H CYS 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf15 H SG CYS 21 H CYS 23 1_555 H SG CYS 90 H CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf16 H SG CYS 142 H CYS 158 1_555 H SG CYS 207 H CYS 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 A ND2 ASN 80 A ASN 78 1_555 L C1 NAG . A NAG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? covale ? covale2 A ND2 ASN 120 A ASN 118 1_555 K C1 NAG . A NAG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? covale ? covale3 C ND2 ASN 120 C ASN 118 1_555 M C1 NAG . C NAG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? metalc ? metalc1 G O ILE 111 G ILE 130 1_555 N CA CA . G CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.652 ? metalc ? metalc2 N CA CA . G CA 301 1_545 H OD2 ASP 16 H ASP 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4OZH _atom_sites.fract_transf_matrix[1][1] 0.003823 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001706 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01728 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007969 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code K 6 NAG A 1 301 1002 NAG NAG . L 6 NAG A 1 302 1001 NAG NAG . M 6 NAG C 1 301 1002 NAG NAG . N 7 CA G 1 301 1 CA CA . O 8 HOH A 1 401 26 HOH HOH . O 8 HOH A 2 402 39 HOH HOH . O 8 HOH A 3 403 41 HOH HOH . P 8 HOH B 1 301 25 HOH HOH . P 8 HOH B 2 302 35 HOH HOH . P 8 HOH B 3 303 40 HOH HOH . P 8 HOH B 4 304 42 HOH HOH . Q 8 HOH C 1 401 36 HOH HOH . R 8 HOH D 1 301 5 HOH HOH . R 8 HOH D 2 302 10 HOH HOH . R 8 HOH D 3 303 30 HOH HOH . R 8 HOH D 4 304 31 HOH HOH . S 8 HOH E 1 301 17 HOH HOH . S 8 HOH E 2 302 6 HOH HOH . S 8 HOH E 3 303 7 HOH HOH . S 8 HOH E 4 304 8 HOH HOH . S 8 HOH E 5 305 9 HOH HOH . S 8 HOH E 6 306 12 HOH HOH . S 8 HOH E 7 307 19 HOH HOH . T 8 HOH F 1 301 11 HOH HOH . T 8 HOH F 2 302 14 HOH HOH . T 8 HOH F 3 303 15 HOH HOH . T 8 HOH F 4 304 16 HOH HOH . T 8 HOH F 5 305 18 HOH HOH . T 8 HOH F 6 306 32 HOH HOH . T 8 HOH F 7 307 33 HOH HOH . T 8 HOH F 8 308 37 HOH HOH . T 8 HOH F 9 309 43 HOH HOH . T 8 HOH F 10 310 44 HOH HOH . U 8 HOH G 1 401 24 HOH HOH . U 8 HOH G 2 402 22 HOH HOH . U 8 HOH G 3 403 45 HOH HOH . V 8 HOH H 1 301 21 HOH HOH . V 8 HOH H 2 302 1 HOH HOH . V 8 HOH H 3 303 2 HOH HOH . V 8 HOH H 4 304 27 HOH HOH . V 8 HOH H 5 305 28 HOH HOH . V 8 HOH H 6 306 29 HOH HOH . V 8 HOH H 7 307 34 HOH HOH . V 8 HOH H 8 308 38 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id N _atom_site.label_entity_id 7 _atom_site.Cartn_x 28.292 _atom_site.Cartn_y -4.74 _atom_site.Cartn_z 193.839 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 71.82 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 301 _atom_site.auth_asym_id G _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 36 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #