data_4P0I # _model_server_result.job_id fjn88B9SBDhkWiKoVrKh9w _model_server_result.datetime_utc '2024-11-08 16:31:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4p0i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":301}' # _entry.id 4P0I # _exptl.entry_id 4P0I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 117.86 _cell.angle_gamma 90 _cell.entry_id 4P0I _cell.length_a 118.86 _cell.length_b 69.71 _cell.length_c 74.38 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4P0I _symmetry.cell_setting . _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,I 1 1 B,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 4P0I _atom_sites.fract_transf_matrix[1][1] 0.008413 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004447 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014345 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015207 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 301 1 EDO EDO . D 3 PEG A 1 302 1 PEG PEG . E 2 EDO A 1 303 2 EDO EDO . F 2 EDO A 1 304 6 EDO EDO . G 2 EDO A 1 305 1 EDO EDO . H 2 EDO B 1 301 5 EDO EDO . I 4 HOH A 1 401 278 HOH HOH . I 4 HOH A 2 402 83 HOH HOH . I 4 HOH A 3 403 203 HOH HOH . I 4 HOH A 4 404 166 HOH HOH . I 4 HOH A 5 405 76 HOH HOH . I 4 HOH A 6 406 41 HOH HOH . I 4 HOH A 7 407 18 HOH HOH . I 4 HOH A 8 408 254 HOH HOH . I 4 HOH A 9 409 459 HOH HOH . I 4 HOH A 10 410 223 HOH HOH . I 4 HOH A 11 411 150 HOH HOH . I 4 HOH A 12 412 524 HOH HOH . I 4 HOH A 13 413 237 HOH HOH . I 4 HOH A 14 414 220 HOH HOH . I 4 HOH A 15 415 86 HOH HOH . I 4 HOH A 16 416 7 HOH HOH . I 4 HOH A 17 417 422 HOH HOH . I 4 HOH A 18 418 20 HOH HOH . I 4 HOH A 19 419 228 HOH HOH . I 4 HOH A 20 420 42 HOH HOH . I 4 HOH A 21 421 437 HOH HOH . I 4 HOH A 22 422 231 HOH HOH . I 4 HOH A 23 423 44 HOH HOH . I 4 HOH A 24 424 79 HOH HOH . I 4 HOH A 25 425 62 HOH HOH . I 4 HOH A 26 426 167 HOH HOH . I 4 HOH A 27 427 193 HOH HOH . I 4 HOH A 28 428 24 HOH HOH . I 4 HOH A 29 429 355 HOH HOH . I 4 HOH A 30 430 185 HOH HOH . I 4 HOH A 31 431 244 HOH HOH . I 4 HOH A 32 432 23 HOH HOH . I 4 HOH A 33 433 146 HOH HOH . I 4 HOH A 34 434 37 HOH HOH . I 4 HOH A 35 435 17 HOH HOH . I 4 HOH A 36 436 259 HOH HOH . I 4 HOH A 37 437 544 HOH HOH . I 4 HOH A 38 438 145 HOH HOH . I 4 HOH A 39 439 174 HOH HOH . I 4 HOH A 40 440 308 HOH HOH . I 4 HOH A 41 441 367 HOH HOH . I 4 HOH A 42 442 253 HOH HOH . I 4 HOH A 43 443 357 HOH HOH . I 4 HOH A 44 444 144 HOH HOH . I 4 HOH A 45 445 533 HOH HOH . I 4 HOH A 46 446 199 HOH HOH . I 4 HOH A 47 447 257 HOH HOH . I 4 HOH A 48 448 285 HOH HOH . I 4 HOH A 49 449 506 HOH HOH . I 4 HOH A 50 450 186 HOH HOH . I 4 HOH A 51 451 248 HOH HOH . I 4 HOH A 52 452 249 HOH HOH . I 4 HOH A 53 453 330 HOH HOH . I 4 HOH A 54 454 283 HOH HOH . I 4 HOH A 55 455 532 HOH HOH . I 4 HOH A 56 456 428 HOH HOH . I 4 HOH A 57 457 61 HOH HOH . I 4 HOH A 58 458 286 HOH HOH . I 4 HOH A 59 459 85 HOH HOH . I 4 HOH A 60 460 356 HOH HOH . I 4 HOH A 61 461 32 HOH HOH . I 4 HOH A 62 462 45 HOH HOH . I 4 HOH A 63 463 261 HOH HOH . I 4 HOH A 64 464 331 HOH HOH . I 4 HOH A 65 465 350 HOH HOH . I 4 HOH A 66 466 539 HOH HOH . I 4 HOH A 67 467 526 HOH HOH . I 4 HOH A 68 468 371 HOH HOH . I 4 HOH A 69 469 332 HOH HOH . I 4 HOH A 70 470 274 HOH HOH . I 4 HOH A 71 471 502 HOH HOH . I 4 HOH A 72 472 293 HOH HOH . I 4 HOH A 73 473 464 HOH HOH . I 4 HOH A 74 474 333 HOH HOH . I 4 HOH A 75 475 277 HOH HOH . I 4 HOH A 76 476 2 HOH HOH . I 4 HOH A 77 477 3 HOH HOH . I 4 HOH A 78 478 4 HOH HOH . I 4 HOH A 79 479 6 HOH HOH . I 4 HOH A 80 480 8 HOH HOH . I 4 HOH A 81 481 9 HOH HOH . I 4 HOH A 82 482 10 HOH HOH . I 4 HOH A 83 483 11 HOH HOH . I 4 HOH A 84 484 12 HOH HOH . I 4 HOH A 85 485 13 HOH HOH . I 4 HOH A 86 486 14 HOH HOH . I 4 HOH A 87 487 15 HOH HOH . I 4 HOH A 88 488 16 HOH HOH . I 4 HOH A 89 489 19 HOH HOH . I 4 HOH A 90 490 21 HOH HOH . I 4 HOH A 91 491 29 HOH HOH . I 4 HOH A 92 492 30 HOH HOH . I 4 HOH A 93 493 33 HOH HOH . I 4 HOH A 94 494 35 HOH HOH . I 4 HOH A 95 495 38 HOH HOH . I 4 HOH A 96 496 40 HOH HOH . I 4 HOH A 97 497 43 HOH HOH . I 4 HOH A 98 498 47 HOH HOH . I 4 HOH A 99 499 48 HOH HOH . I 4 HOH A 100 500 49 HOH HOH . I 4 HOH A 101 501 50 HOH HOH . I 4 HOH A 102 502 51 HOH HOH . I 4 HOH A 103 503 53 HOH HOH . I 4 HOH A 104 504 54 HOH HOH . I 4 HOH A 105 505 55 HOH HOH . I 4 HOH A 106 506 60 HOH HOH . I 4 HOH A 107 507 63 HOH HOH . I 4 HOH A 108 508 80 HOH HOH . I 4 HOH A 109 509 172 HOH HOH . I 4 HOH A 110 510 173 HOH HOH . I 4 HOH A 111 511 179 HOH HOH . I 4 HOH A 112 512 180 HOH HOH . I 4 HOH A 113 513 181 HOH HOH . I 4 HOH A 114 514 182 HOH HOH . I 4 HOH A 115 515 183 HOH HOH . I 4 HOH A 116 516 184 HOH HOH . I 4 HOH A 117 517 191 HOH HOH . I 4 HOH A 118 518 192 HOH HOH . I 4 HOH A 119 519 195 HOH HOH . I 4 HOH A 120 520 196 HOH HOH . I 4 HOH A 121 521 197 HOH HOH . I 4 HOH A 122 522 201 HOH HOH . I 4 HOH A 123 523 202 HOH HOH . I 4 HOH A 124 524 205 HOH HOH . I 4 HOH A 125 525 208 HOH HOH . I 4 HOH A 126 526 209 HOH HOH . I 4 HOH A 127 527 215 HOH HOH . I 4 HOH A 128 528 217 HOH HOH . I 4 HOH A 129 529 218 HOH HOH . I 4 HOH A 130 530 222 HOH HOH . I 4 HOH A 131 531 229 HOH HOH . I 4 HOH A 132 532 232 HOH HOH . I 4 HOH A 133 533 233 HOH HOH . I 4 HOH A 134 534 234 HOH HOH . I 4 HOH A 135 535 235 HOH HOH . I 4 HOH A 136 536 239 HOH HOH . I 4 HOH A 137 537 241 HOH HOH . I 4 HOH A 138 538 247 HOH HOH . I 4 HOH A 139 539 250 HOH HOH . I 4 HOH A 140 540 251 HOH HOH . I 4 HOH A 141 541 252 HOH HOH . I 4 HOH A 142 542 255 HOH HOH . I 4 HOH A 143 543 258 HOH HOH . I 4 HOH A 144 544 260 HOH HOH . I 4 HOH A 145 545 263 HOH HOH . I 4 HOH A 146 546 265 HOH HOH . I 4 HOH A 147 547 269 HOH HOH . I 4 HOH A 148 548 273 HOH HOH . I 4 HOH A 149 549 282 HOH HOH . I 4 HOH A 150 550 287 HOH HOH . I 4 HOH A 151 551 289 HOH HOH . I 4 HOH A 152 552 290 HOH HOH . I 4 HOH A 153 553 291 HOH HOH . I 4 HOH A 154 554 297 HOH HOH . I 4 HOH A 155 555 306 HOH HOH . I 4 HOH A 156 556 320 HOH HOH . I 4 HOH A 157 557 323 HOH HOH . I 4 HOH A 158 558 324 HOH HOH . I 4 HOH A 159 559 325 HOH HOH . I 4 HOH A 160 560 346 HOH HOH . I 4 HOH A 161 561 349 HOH HOH . I 4 HOH A 162 562 351 HOH HOH . I 4 HOH A 163 563 353 HOH HOH . I 4 HOH A 164 564 358 HOH HOH . I 4 HOH A 165 565 359 HOH HOH . I 4 HOH A 166 566 360 HOH HOH . I 4 HOH A 167 567 381 HOH HOH . I 4 HOH A 168 568 430 HOH HOH . I 4 HOH A 169 569 468 HOH HOH . I 4 HOH A 170 570 469 HOH HOH . I 4 HOH A 171 571 483 HOH HOH . I 4 HOH A 172 572 484 HOH HOH . I 4 HOH A 173 573 487 HOH HOH . I 4 HOH A 174 574 488 HOH HOH . I 4 HOH A 175 575 493 HOH HOH . I 4 HOH A 176 576 494 HOH HOH . I 4 HOH A 177 577 500 HOH HOH . I 4 HOH A 178 578 503 HOH HOH . I 4 HOH A 179 579 509 HOH HOH . I 4 HOH A 180 580 510 HOH HOH . I 4 HOH A 181 581 511 HOH HOH . I 4 HOH A 182 582 513 HOH HOH . I 4 HOH A 183 583 522 HOH HOH . I 4 HOH A 184 584 523 HOH HOH . I 4 HOH A 185 585 525 HOH HOH . I 4 HOH A 186 586 530 HOH HOH . I 4 HOH A 187 587 531 HOH HOH . I 4 HOH A 188 588 534 HOH HOH . I 4 HOH A 189 589 542 HOH HOH . I 4 HOH A 190 590 543 HOH HOH . I 4 HOH A 191 591 545 HOH HOH . J 4 HOH B 1 401 117 HOH HOH . J 4 HOH B 2 402 288 HOH HOH . J 4 HOH B 3 403 78 HOH HOH . J 4 HOH B 4 404 455 HOH HOH . J 4 HOH B 5 405 141 HOH HOH . J 4 HOH B 6 406 190 HOH HOH . J 4 HOH B 7 407 407 HOH HOH . J 4 HOH B 8 408 73 HOH HOH . J 4 HOH B 9 409 245 HOH HOH . J 4 HOH B 10 410 139 HOH HOH . J 4 HOH B 11 411 165 HOH HOH . J 4 HOH B 12 412 77 HOH HOH . J 4 HOH B 13 413 246 HOH HOH . J 4 HOH B 14 414 478 HOH HOH . J 4 HOH B 15 415 264 HOH HOH . J 4 HOH B 16 416 388 HOH HOH . J 4 HOH B 17 417 242 HOH HOH . J 4 HOH B 18 418 72 HOH HOH . J 4 HOH B 19 419 266 HOH HOH . J 4 HOH B 20 420 151 HOH HOH . J 4 HOH B 21 421 90 HOH HOH . J 4 HOH B 22 422 498 HOH HOH . J 4 HOH B 23 423 535 HOH HOH . J 4 HOH B 24 424 382 HOH HOH . J 4 HOH B 25 425 417 HOH HOH . J 4 HOH B 26 426 140 HOH HOH . J 4 HOH B 27 427 189 HOH HOH . J 4 HOH B 28 428 521 HOH HOH . J 4 HOH B 29 429 230 HOH HOH . J 4 HOH B 30 430 365 HOH HOH . J 4 HOH B 31 431 108 HOH HOH . J 4 HOH B 32 432 275 HOH HOH . J 4 HOH B 33 433 270 HOH HOH . J 4 HOH B 34 434 504 HOH HOH . J 4 HOH B 35 435 445 HOH HOH . J 4 HOH B 36 436 440 HOH HOH . J 4 HOH B 37 437 482 HOH HOH . J 4 HOH B 38 438 496 HOH HOH . J 4 HOH B 39 439 69 HOH HOH . J 4 HOH B 40 440 88 HOH HOH . J 4 HOH B 41 441 89 HOH HOH . J 4 HOH B 42 442 91 HOH HOH . J 4 HOH B 43 443 92 HOH HOH . J 4 HOH B 44 444 94 HOH HOH . J 4 HOH B 45 445 95 HOH HOH . J 4 HOH B 46 446 98 HOH HOH . J 4 HOH B 47 447 100 HOH HOH . J 4 HOH B 48 448 101 HOH HOH . J 4 HOH B 49 449 102 HOH HOH . J 4 HOH B 50 450 103 HOH HOH . J 4 HOH B 51 451 104 HOH HOH . J 4 HOH B 52 452 107 HOH HOH . J 4 HOH B 53 453 109 HOH HOH . J 4 HOH B 54 454 110 HOH HOH . J 4 HOH B 55 455 112 HOH HOH . J 4 HOH B 56 456 114 HOH HOH . J 4 HOH B 57 457 115 HOH HOH . J 4 HOH B 58 458 116 HOH HOH . J 4 HOH B 59 459 119 HOH HOH . J 4 HOH B 60 460 124 HOH HOH . J 4 HOH B 61 461 125 HOH HOH . J 4 HOH B 62 462 127 HOH HOH . J 4 HOH B 63 463 131 HOH HOH . J 4 HOH B 64 464 135 HOH HOH . J 4 HOH B 65 465 137 HOH HOH . J 4 HOH B 66 466 138 HOH HOH . J 4 HOH B 67 467 142 HOH HOH . J 4 HOH B 68 468 148 HOH HOH . J 4 HOH B 69 469 153 HOH HOH . J 4 HOH B 70 470 155 HOH HOH . J 4 HOH B 71 471 157 HOH HOH . J 4 HOH B 72 472 159 HOH HOH . J 4 HOH B 73 473 160 HOH HOH . J 4 HOH B 74 474 162 HOH HOH . J 4 HOH B 75 475 168 HOH HOH . J 4 HOH B 76 476 169 HOH HOH . J 4 HOH B 77 477 176 HOH HOH . J 4 HOH B 78 478 177 HOH HOH . J 4 HOH B 79 479 188 HOH HOH . J 4 HOH B 80 480 198 HOH HOH . J 4 HOH B 81 481 211 HOH HOH . J 4 HOH B 82 482 212 HOH HOH . J 4 HOH B 83 483 216 HOH HOH . J 4 HOH B 84 484 219 HOH HOH . J 4 HOH B 85 485 221 HOH HOH . J 4 HOH B 86 486 224 HOH HOH . J 4 HOH B 87 487 226 HOH HOH . J 4 HOH B 88 488 238 HOH HOH . J 4 HOH B 89 489 240 HOH HOH . J 4 HOH B 90 490 243 HOH HOH . J 4 HOH B 91 491 267 HOH HOH . J 4 HOH B 92 492 276 HOH HOH . J 4 HOH B 93 493 298 HOH HOH . J 4 HOH B 94 494 311 HOH HOH . J 4 HOH B 95 495 312 HOH HOH . J 4 HOH B 96 496 313 HOH HOH . J 4 HOH B 97 497 314 HOH HOH . J 4 HOH B 98 498 316 HOH HOH . J 4 HOH B 99 499 397 HOH HOH . J 4 HOH B 100 500 400 HOH HOH . J 4 HOH B 101 501 403 HOH HOH . J 4 HOH B 102 502 410 HOH HOH . J 4 HOH B 103 503 457 HOH HOH . J 4 HOH B 104 504 499 HOH HOH . J 4 HOH B 105 505 516 HOH HOH . J 4 HOH B 106 506 518 HOH HOH . J 4 HOH B 107 507 520 HOH HOH . J 4 HOH B 108 508 527 HOH HOH . J 4 HOH B 109 509 528 HOH HOH . J 4 HOH B 110 510 529 HOH HOH . J 4 HOH B 111 511 536 HOH HOH . J 4 HOH B 112 512 537 HOH HOH . J 4 HOH B 113 513 538 HOH HOH . J 4 HOH B 114 514 540 HOH HOH . J 4 HOH B 115 515 541 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . H 2 -66.587 -20.971 24.636 1 36.54 ? C1 EDO 301 B 1 HETATM 2 O O1 EDO . . . H 2 -66.904 -20.537 25.93 1 32.21 ? O1 EDO 301 B 1 HETATM 3 C C2 EDO . . . H 2 -66.977 -19.948 23.669 1 40.43 ? C2 EDO 301 B 1 HETATM 4 O O2 EDO . . . H 2 -66.278 -18.751 23.955 1 38.77 ? O2 EDO 301 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #