data_4P0W # _model_server_result.job_id 8ctAgreAs8nQRya9Tp47dA _model_server_result.datetime_utc '2024-11-21 16:14:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4p0w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 4P0W # _exptl.entry_id 4P0W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4P0W _cell.length_a 111.239 _cell.length_b 111.239 _cell.length_c 67.292 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4P0W _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 98 A ASP 103 1_555 D MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? metalc ? metalc2 A OD1 ASP 98 A ASP 103 1_555 F MG MG . A MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? metalc ? metalc3 A OD2 ASP 102 A ASP 107 1_555 D MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc4 A OD2 ASP 102 A ASP 107 1_555 F MG MG . A MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.961 ? metalc ? metalc5 A OD2 ASP 238 A ASP 243 1_555 E MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc6 C O16 ZOL . A ZOL 501 1_555 D MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? metalc ? metalc7 C O12 ZOL . A ZOL 501 1_555 D MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc8 C O17 ZOL . A ZOL 501 1_555 E MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? metalc ? metalc9 C O11 ZOL . A ZOL 501 1_555 E MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.916 ? metalc ? metalc10 C O12 ZOL . A ZOL 501 1_555 F MG MG . A MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.868 ? metalc ? metalc11 D MG MG . A MG 502 1_555 G O HOH . A HOH 643 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc12 D MG MG . A MG 502 1_555 G O HOH . A HOH 644 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc13 E MG MG . A MG 503 1_555 G O HOH . A HOH 620 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.958 ? metalc ? metalc14 E MG MG . A MG 503 1_555 G O HOH . A HOH 622 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc15 E MG MG . A MG 503 1_555 G O HOH . A HOH 629 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? metalc ? metalc16 F MG MG . A MG 504 1_555 G O HOH . A HOH 641 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.904 ? metalc ? metalc17 F MG MG . A MG 504 1_555 G O HOH . A HOH 642 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.764 ? metalc ? metalc18 F MG MG . A MG 504 1_555 G O HOH . A HOH 647 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.945 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4P0W _atom_sites.fract_transf_matrix[1][1] 0.00899 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00899 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014861 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1XH A 1 500 500 1XH 1XH . C 3 ZOL A 1 501 501 ZOL ZOL . D 4 MG A 1 502 502 MG MG . E 4 MG A 1 503 503 MG MG . F 4 MG A 1 504 504 MG MG . G 5 HOH A 1 601 375 HOH HOH . G 5 HOH A 2 602 405 HOH HOH . G 5 HOH A 3 603 388 HOH HOH . G 5 HOH A 4 604 372 HOH HOH . G 5 HOH A 5 605 360 HOH HOH . G 5 HOH A 6 606 403 HOH HOH . G 5 HOH A 7 607 366 HOH HOH . G 5 HOH A 8 608 382 HOH HOH . G 5 HOH A 9 609 387 HOH HOH . G 5 HOH A 10 610 391 HOH HOH . G 5 HOH A 11 611 369 HOH HOH . G 5 HOH A 12 612 374 HOH HOH . G 5 HOH A 13 613 386 HOH HOH . G 5 HOH A 14 614 379 HOH HOH . G 5 HOH A 15 615 413 HOH HOH . G 5 HOH A 16 616 411 HOH HOH . G 5 HOH A 17 617 384 HOH HOH . G 5 HOH A 18 618 404 HOH HOH . G 5 HOH A 19 619 356 HOH HOH . G 5 HOH A 20 620 357 HOH HOH . G 5 HOH A 21 621 358 HOH HOH . G 5 HOH A 22 622 359 HOH HOH . G 5 HOH A 23 623 362 HOH HOH . G 5 HOH A 24 624 363 HOH HOH . G 5 HOH A 25 625 364 HOH HOH . G 5 HOH A 26 626 365 HOH HOH . G 5 HOH A 27 627 367 HOH HOH . G 5 HOH A 28 628 368 HOH HOH . G 5 HOH A 29 629 370 HOH HOH . G 5 HOH A 30 630 371 HOH HOH . G 5 HOH A 31 631 373 HOH HOH . G 5 HOH A 32 632 376 HOH HOH . G 5 HOH A 33 633 377 HOH HOH . G 5 HOH A 34 634 378 HOH HOH . G 5 HOH A 35 635 380 HOH HOH . G 5 HOH A 36 636 381 HOH HOH . G 5 HOH A 37 637 383 HOH HOH . G 5 HOH A 38 638 385 HOH HOH . G 5 HOH A 39 639 389 HOH HOH . G 5 HOH A 40 640 392 HOH HOH . G 5 HOH A 41 641 393 HOH HOH . G 5 HOH A 42 642 394 HOH HOH . G 5 HOH A 43 643 395 HOH HOH . G 5 HOH A 44 644 396 HOH HOH . G 5 HOH A 45 645 397 HOH HOH . G 5 HOH A 46 646 398 HOH HOH . G 5 HOH A 47 647 399 HOH HOH . G 5 HOH A 48 648 400 HOH HOH . G 5 HOH A 49 649 401 HOH HOH . G 5 HOH A 50 650 402 HOH HOH . G 5 HOH A 51 651 406 HOH HOH . G 5 HOH A 52 652 407 HOH HOH . G 5 HOH A 53 653 408 HOH HOH . G 5 HOH A 54 654 409 HOH HOH . G 5 HOH A 55 655 410 HOH HOH . G 5 HOH A 56 656 412 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 34.839 _atom_site.Cartn_y 18.508 _atom_site.Cartn_z 7.317 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 32.1 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 502 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 250 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #