data_4P2E # _model_server_result.job_id Lco-jkgjF7R-zbESwrQuzg _model_server_result.datetime_utc '2024-12-23 09:33:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4p2e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":209}' # _entry.id 4P2E # _exptl.entry_id 4P2E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (II) ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4P2E _cell.length_a 77.833 _cell.length_b 77.833 _cell.length_c 36.636 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4P2E _symmetry.cell_setting . _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc1 A OE2 GLU 7 A GLU 7 1_555 I CU CU . A CU 208 7_555 ? A ? ? ? ? ? ? ? ? ? ? 1.961 ? metalc ? metalc2 A NE2 HIS 15 A HIS 15 1_555 I CU CU . A CU 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc3 A OD1 ASN 46 A ASN 46 1_555 K CU CU . A CU 210 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc4 A OD2 ASP 52 A ASP 52 1_555 J CU CU . A CU 209 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc5 A OD2 ASP 52 A ASP 52 1_555 K CU CU . A CU 210 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? metalc ? metalc6 A O SER 60 A SER 60 1_555 B NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc7 A O CYS 64 A CYS 64 1_555 B NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? metalc ? metalc8 A OG SER 72 A SER 72 1_555 B NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc9 A O ARG 73 A ARG 73 1_555 B NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc10 A O LEU 129 A LEU 129 1_555 H CU CU . A CU 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc11 A O LEU 129 A LEU 129 1_555 H CU CU . A CU 207 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc12 B NA NA . A NA 201 1_555 L O HOH . A HOH 375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc13 B NA NA . A NA 201 1_555 L O HOH . A HOH 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc14 H CU CU . A CU 207 1_555 L O HOH . A HOH 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.929 ? metalc ? metalc15 H CU CU . A CU 207 1_555 L O HOH . A HOH 340 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.929 ? metalc ? metalc16 H CU CU . A CU 207 1_555 L O HOH . A HOH 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? metalc ? metalc17 H CU CU . A CU 207 1_555 L O HOH . A HOH 430 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? metalc ? metalc18 I CU CU . A CU 208 1_555 L O HOH . A HOH 374 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc19 I CU CU . A CU 208 1_555 L O HOH . A HOH 403 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc20 J CU CU . A CU 209 1_555 K CU CU . A CU 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc21 J CU CU . A CU 209 1_555 L O HOH . A HOH 308 4_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc22 J CU CU . A CU 209 1_555 L O HOH . A HOH 409 4_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc23 J CU CU . A CU 209 1_555 L O HOH . A HOH 416 4_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc24 J CU CU . A CU 209 1_555 L O HOH . A HOH 460 4_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc25 K CU CU . A CU 210 1_555 L O HOH . A HOH 425 4_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? # _chem_comp.formula 'Cu 2' _chem_comp.formula_weight 63.546 _chem_comp.id CU _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4P2E _atom_sites.fract_transf_matrix[1][1] 0.012848 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012848 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.027296 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 201 1 NA NA . C 3 CL A 1 202 1 CL CL . D 3 CL A 1 203 2 CL CL . E 3 CL A 1 204 3 CL CL . F 3 CL A 1 205 4 CL CL . G 3 CL A 1 206 5 CL CL . H 4 CU A 1 207 1 CU CU . I 4 CU A 1 208 2 CU CU . J 4 CU A 1 209 3 CU CU . K 4 CU A 1 210 4 CU CU . L 5 HOH A 1 301 184 HOH HOH . L 5 HOH A 2 302 129 HOH HOH . L 5 HOH A 3 303 167 HOH HOH . L 5 HOH A 4 304 183 HOH HOH . L 5 HOH A 5 305 133 HOH HOH . L 5 HOH A 6 306 135 HOH HOH . L 5 HOH A 7 307 159 HOH HOH . L 5 HOH A 8 308 130 HOH HOH . L 5 HOH A 9 309 177 HOH HOH . L 5 HOH A 10 310 181 HOH HOH . L 5 HOH A 11 311 40 HOH HOH . L 5 HOH A 12 312 103 HOH HOH . L 5 HOH A 13 313 13 HOH HOH . L 5 HOH A 14 314 15 HOH HOH . L 5 HOH A 15 315 102 HOH HOH . L 5 HOH A 16 316 121 HOH HOH . L 5 HOH A 17 317 30 HOH HOH . L 5 HOH A 18 318 44 HOH HOH . L 5 HOH A 19 319 73 HOH HOH . L 5 HOH A 20 320 3 HOH HOH . L 5 HOH A 21 321 2 HOH HOH . L 5 HOH A 22 322 42 HOH HOH . L 5 HOH A 23 323 128 HOH HOH . L 5 HOH A 24 324 139 HOH HOH . L 5 HOH A 25 325 66 HOH HOH . L 5 HOH A 26 326 22 HOH HOH . L 5 HOH A 27 327 48 HOH HOH . L 5 HOH A 28 328 49 HOH HOH . L 5 HOH A 29 329 19 HOH HOH . L 5 HOH A 30 330 57 HOH HOH . L 5 HOH A 31 331 153 HOH HOH . L 5 HOH A 32 332 12 HOH HOH . L 5 HOH A 33 333 51 HOH HOH . L 5 HOH A 34 334 156 HOH HOH . L 5 HOH A 35 335 38 HOH HOH . L 5 HOH A 36 336 85 HOH HOH . L 5 HOH A 37 337 149 HOH HOH . L 5 HOH A 38 338 182 HOH HOH . L 5 HOH A 39 339 157 HOH HOH . L 5 HOH A 40 340 114 HOH HOH . L 5 HOH A 41 341 162 HOH HOH . L 5 HOH A 42 342 120 HOH HOH . L 5 HOH A 43 343 10 HOH HOH . L 5 HOH A 44 344 29 HOH HOH . L 5 HOH A 45 345 78 HOH HOH . L 5 HOH A 46 346 108 HOH HOH . L 5 HOH A 47 347 72 HOH HOH . L 5 HOH A 48 348 104 HOH HOH . L 5 HOH A 49 349 50 HOH HOH . L 5 HOH A 50 350 34 HOH HOH . L 5 HOH A 51 351 83 HOH HOH . L 5 HOH A 52 352 8 HOH HOH . L 5 HOH A 53 353 37 HOH HOH . L 5 HOH A 54 354 27 HOH HOH . L 5 HOH A 55 355 26 HOH HOH . L 5 HOH A 56 356 68 HOH HOH . L 5 HOH A 57 357 55 HOH HOH . L 5 HOH A 58 358 63 HOH HOH . L 5 HOH A 59 359 1 HOH HOH . L 5 HOH A 60 360 168 HOH HOH . L 5 HOH A 61 361 132 HOH HOH . L 5 HOH A 62 362 107 HOH HOH . L 5 HOH A 63 363 16 HOH HOH . L 5 HOH A 64 364 28 HOH HOH . L 5 HOH A 65 365 24 HOH HOH . L 5 HOH A 66 366 17 HOH HOH . L 5 HOH A 67 367 97 HOH HOH . L 5 HOH A 68 368 100 HOH HOH . L 5 HOH A 69 369 33 HOH HOH . L 5 HOH A 70 370 39 HOH HOH . L 5 HOH A 71 371 56 HOH HOH . L 5 HOH A 72 372 96 HOH HOH . L 5 HOH A 73 373 59 HOH HOH . L 5 HOH A 74 374 152 HOH HOH . L 5 HOH A 75 375 4 HOH HOH . L 5 HOH A 76 376 101 HOH HOH . L 5 HOH A 77 377 7 HOH HOH . L 5 HOH A 78 378 61 HOH HOH . L 5 HOH A 79 379 117 HOH HOH . L 5 HOH A 80 380 124 HOH HOH . L 5 HOH A 81 381 144 HOH HOH . L 5 HOH A 82 382 109 HOH HOH . L 5 HOH A 83 383 45 HOH HOH . L 5 HOH A 84 384 36 HOH HOH . L 5 HOH A 85 385 5 HOH HOH . L 5 HOH A 86 386 52 HOH HOH . L 5 HOH A 87 387 31 HOH HOH . L 5 HOH A 88 388 187 HOH HOH . L 5 HOH A 89 389 134 HOH HOH . L 5 HOH A 90 390 77 HOH HOH . L 5 HOH A 91 391 21 HOH HOH . L 5 HOH A 92 392 14 HOH HOH . L 5 HOH A 93 393 112 HOH HOH . L 5 HOH A 94 394 23 HOH HOH . L 5 HOH A 95 395 74 HOH HOH . L 5 HOH A 96 396 106 HOH HOH . L 5 HOH A 97 397 95 HOH HOH . L 5 HOH A 98 398 18 HOH HOH . L 5 HOH A 99 399 116 HOH HOH . L 5 HOH A 100 400 173 HOH HOH . L 5 HOH A 101 401 75 HOH HOH . L 5 HOH A 102 402 80 HOH HOH . L 5 HOH A 103 403 150 HOH HOH . L 5 HOH A 104 404 84 HOH HOH . L 5 HOH A 105 405 186 HOH HOH . L 5 HOH A 106 406 64 HOH HOH . L 5 HOH A 107 407 11 HOH HOH . L 5 HOH A 108 408 118 HOH HOH . L 5 HOH A 109 409 161 HOH HOH . L 5 HOH A 110 410 32 HOH HOH . L 5 HOH A 111 411 82 HOH HOH . L 5 HOH A 112 412 25 HOH HOH . L 5 HOH A 113 413 6 HOH HOH . L 5 HOH A 114 414 122 HOH HOH . L 5 HOH A 115 415 62 HOH HOH . L 5 HOH A 116 416 145 HOH HOH . L 5 HOH A 117 417 148 HOH HOH . L 5 HOH A 118 418 111 HOH HOH . L 5 HOH A 119 419 98 HOH HOH . L 5 HOH A 120 420 185 HOH HOH . L 5 HOH A 121 421 71 HOH HOH . L 5 HOH A 122 422 35 HOH HOH . L 5 HOH A 123 423 105 HOH HOH . L 5 HOH A 124 424 41 HOH HOH . L 5 HOH A 125 425 171 HOH HOH . L 5 HOH A 126 426 67 HOH HOH . L 5 HOH A 127 427 20 HOH HOH . L 5 HOH A 128 428 141 HOH HOH . L 5 HOH A 129 429 146 HOH HOH . L 5 HOH A 130 430 110 HOH HOH . L 5 HOH A 131 431 69 HOH HOH . L 5 HOH A 132 432 47 HOH HOH . L 5 HOH A 133 433 165 HOH HOH . L 5 HOH A 134 434 158 HOH HOH . L 5 HOH A 135 435 9 HOH HOH . L 5 HOH A 136 436 70 HOH HOH . L 5 HOH A 137 437 136 HOH HOH . L 5 HOH A 138 438 93 HOH HOH . L 5 HOH A 139 439 155 HOH HOH . L 5 HOH A 140 440 170 HOH HOH . L 5 HOH A 141 441 91 HOH HOH . L 5 HOH A 142 442 126 HOH HOH . L 5 HOH A 143 443 166 HOH HOH . L 5 HOH A 144 444 86 HOH HOH . L 5 HOH A 145 445 87 HOH HOH . L 5 HOH A 146 446 137 HOH HOH . L 5 HOH A 147 447 54 HOH HOH . L 5 HOH A 148 448 172 HOH HOH . L 5 HOH A 149 449 43 HOH HOH . L 5 HOH A 150 450 119 HOH HOH . L 5 HOH A 151 451 175 HOH HOH . L 5 HOH A 152 452 140 HOH HOH . L 5 HOH A 153 453 123 HOH HOH . L 5 HOH A 154 454 160 HOH HOH . L 5 HOH A 155 455 115 HOH HOH . L 5 HOH A 156 456 65 HOH HOH . L 5 HOH A 157 457 53 HOH HOH . L 5 HOH A 158 458 92 HOH HOH . L 5 HOH A 159 459 90 HOH HOH . L 5 HOH A 160 460 127 HOH HOH . L 5 HOH A 161 461 58 HOH HOH . L 5 HOH A 162 462 169 HOH HOH . L 5 HOH A 163 463 81 HOH HOH . L 5 HOH A 164 464 60 HOH HOH . L 5 HOH A 165 465 113 HOH HOH . L 5 HOH A 166 466 142 HOH HOH . L 5 HOH A 167 467 76 HOH HOH . L 5 HOH A 168 468 154 HOH HOH . L 5 HOH A 169 469 88 HOH HOH . L 5 HOH A 170 470 147 HOH HOH . L 5 HOH A 171 471 138 HOH HOH . L 5 HOH A 172 472 180 HOH HOH . L 5 HOH A 173 473 94 HOH HOH . L 5 HOH A 174 474 99 HOH HOH . L 5 HOH A 175 475 46 HOH HOH . L 5 HOH A 176 476 89 HOH HOH . L 5 HOH A 177 477 143 HOH HOH . L 5 HOH A 178 478 174 HOH HOH . L 5 HOH A 179 479 79 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 4 _atom_site.Cartn_x 7.057 _atom_site.Cartn_y 22.73 _atom_site.Cartn_z -14.144 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 29.72 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU _atom_site.auth_seq_id 209 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #