data_4P2F # _model_server_result.job_id TFjUUrRFRHr6vnviZBkPFA _model_server_result.datetime_utc '2024-12-25 13:56:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4p2f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 4P2F # _exptl.entry_id 4P2F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 18 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4P2F _cell.length_a 29.89 _cell.length_b 67.37 _cell.length_c 101.55 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4P2F _symmetry.cell_setting . _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 4P2F _atom_sites.fract_transf_matrix[1][1] 0.033456 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014843 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009847 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 501 1 EDO EDO . C 2 EDO A 1 502 2 EDO EDO . D 2 EDO A 1 503 3 EDO EDO . E 2 EDO A 1 504 4 EDO EDO . F 2 EDO A 1 505 5 EDO EDO . G 2 EDO A 1 506 6 EDO EDO . H 2 EDO A 1 507 7 EDO EDO . I 2 EDO A 1 508 8 EDO EDO . J 2 EDO A 1 509 9 EDO EDO . K 2 EDO A 1 510 10 EDO EDO . L 2 EDO A 1 511 11 EDO EDO . M 2 EDO A 1 512 12 EDO EDO . N 2 EDO A 1 513 13 EDO EDO . O 2 EDO A 1 514 14 EDO EDO . P 2 EDO A 1 515 15 EDO EDO . Q 2 EDO A 1 516 16 EDO EDO . R 2 EDO A 1 517 17 EDO EDO . S 2 EDO A 1 518 18 EDO EDO . T 3 PEG A 1 519 1 PEG PEG . U 4 GOL A 1 520 1 GOL GOL . V 5 HOH A 1 601 50 HOH HOH . V 5 HOH A 2 602 4 HOH HOH . V 5 HOH A 3 603 76 HOH HOH . V 5 HOH A 4 604 83 HOH HOH . V 5 HOH A 5 605 44 HOH HOH . V 5 HOH A 6 606 84 HOH HOH . V 5 HOH A 7 607 92 HOH HOH . V 5 HOH A 8 608 46 HOH HOH . V 5 HOH A 9 609 36 HOH HOH . V 5 HOH A 10 610 3 HOH HOH . V 5 HOH A 11 611 64 HOH HOH . V 5 HOH A 12 612 15 HOH HOH . V 5 HOH A 13 613 54 HOH HOH . V 5 HOH A 14 614 69 HOH HOH . V 5 HOH A 15 615 45 HOH HOH . V 5 HOH A 16 616 59 HOH HOH . V 5 HOH A 17 617 57 HOH HOH . V 5 HOH A 18 618 66 HOH HOH . V 5 HOH A 19 619 67 HOH HOH . V 5 HOH A 20 620 56 HOH HOH . V 5 HOH A 21 621 51 HOH HOH . V 5 HOH A 22 622 13 HOH HOH . V 5 HOH A 23 623 2 HOH HOH . V 5 HOH A 24 624 24 HOH HOH . V 5 HOH A 25 625 38 HOH HOH . V 5 HOH A 26 626 48 HOH HOH . V 5 HOH A 27 627 63 HOH HOH . V 5 HOH A 28 628 86 HOH HOH . V 5 HOH A 29 629 82 HOH HOH . V 5 HOH A 30 630 60 HOH HOH . V 5 HOH A 31 631 68 HOH HOH . V 5 HOH A 32 632 79 HOH HOH . V 5 HOH A 33 633 16 HOH HOH . V 5 HOH A 34 634 32 HOH HOH . V 5 HOH A 35 635 93 HOH HOH . V 5 HOH A 36 636 22 HOH HOH . V 5 HOH A 37 637 74 HOH HOH . V 5 HOH A 38 638 87 HOH HOH . V 5 HOH A 39 639 11 HOH HOH . V 5 HOH A 40 640 35 HOH HOH . V 5 HOH A 41 641 40 HOH HOH . V 5 HOH A 42 642 71 HOH HOH . V 5 HOH A 43 643 28 HOH HOH . V 5 HOH A 44 644 1 HOH HOH . V 5 HOH A 45 645 55 HOH HOH . V 5 HOH A 46 646 29 HOH HOH . V 5 HOH A 47 647 39 HOH HOH . V 5 HOH A 48 648 37 HOH HOH . V 5 HOH A 49 649 41 HOH HOH . V 5 HOH A 50 650 88 HOH HOH . V 5 HOH A 51 651 25 HOH HOH . V 5 HOH A 52 652 47 HOH HOH . V 5 HOH A 53 653 14 HOH HOH . V 5 HOH A 54 654 90 HOH HOH . V 5 HOH A 55 655 49 HOH HOH . V 5 HOH A 56 656 85 HOH HOH . V 5 HOH A 57 657 5 HOH HOH . V 5 HOH A 58 658 6 HOH HOH . V 5 HOH A 59 659 7 HOH HOH . V 5 HOH A 60 660 8 HOH HOH . V 5 HOH A 61 661 9 HOH HOH . V 5 HOH A 62 662 10 HOH HOH . V 5 HOH A 63 663 12 HOH HOH . V 5 HOH A 64 664 17 HOH HOH . V 5 HOH A 65 665 18 HOH HOH . V 5 HOH A 66 666 19 HOH HOH . V 5 HOH A 67 667 20 HOH HOH . V 5 HOH A 68 668 21 HOH HOH . V 5 HOH A 69 669 23 HOH HOH . V 5 HOH A 70 670 26 HOH HOH . V 5 HOH A 71 671 27 HOH HOH . V 5 HOH A 72 672 30 HOH HOH . V 5 HOH A 73 673 31 HOH HOH . V 5 HOH A 74 674 33 HOH HOH . V 5 HOH A 75 675 34 HOH HOH . V 5 HOH A 76 676 42 HOH HOH . V 5 HOH A 77 677 43 HOH HOH . V 5 HOH A 78 678 52 HOH HOH . V 5 HOH A 79 679 53 HOH HOH . V 5 HOH A 80 680 58 HOH HOH . V 5 HOH A 81 681 61 HOH HOH . V 5 HOH A 82 682 62 HOH HOH . V 5 HOH A 83 683 65 HOH HOH . V 5 HOH A 84 684 70 HOH HOH . V 5 HOH A 85 685 72 HOH HOH . V 5 HOH A 86 686 73 HOH HOH . V 5 HOH A 87 687 75 HOH HOH . V 5 HOH A 88 688 77 HOH HOH . V 5 HOH A 89 689 78 HOH HOH . V 5 HOH A 90 690 80 HOH HOH . V 5 HOH A 91 691 81 HOH HOH . V 5 HOH A 92 692 89 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 14.031 66.161 34.811 1 41.87 ? C1 EDO 501 A 1 HETATM 2 O O1 EDO . . . B 2 13.56 67.44 34.384 1 41.8 ? O1 EDO 501 A 1 HETATM 3 C C2 EDO . . . B 2 15.527 66.357 34.899 1 44.36 ? C2 EDO 501 A 1 HETATM 4 O O2 EDO . . . B 2 15.731 67.768 34.705 1 43.01 ? O2 EDO 501 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #