data_4P2X # _model_server_result.job_id ajzYRV3Wuj2x-jW5JldhZA _model_server_result.datetime_utc '2024-10-27 08:34:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4p2x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 4P2X # _exptl.entry_id 4P2X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4P2X _cell.length_a 75.57 _cell.length_b 75.57 _cell.length_c 133.17 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4P2X _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 59 A ASP 245 1_555 F MG MG . A MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc2 A OH TYR 61 A TYR 247 1_555 F MG MG . A MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.841 ? metalc ? metalc3 A O ALA 168 A ALA 354 1_555 F MG MG . A MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.744 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 293 n n S O2 SO4 doub 294 n n S O3 SO4 sing 295 n n S O4 SO4 sing 296 n n # _atom_sites.entry_id 4P2X _atom_sites.fract_transf_matrix[1][1] 0.013233 _atom_sites.fract_transf_matrix[1][2] 0.00764 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01528 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007509 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 501 1 SO4 SO4 . D 3 PEG A 1 502 2 PEG PEG . E 3 PEG A 1 503 3 PEG PEG . F 4 MG A 1 504 1 MG MG . G 3 PEG B 1 501 1 PEG PEG . H 3 PEG B 1 502 4 PEG PEG . I 5 CL B 1 503 1 CL CL . J 6 HOH A 1 601 19 HOH HOH . J 6 HOH A 2 602 13 HOH HOH . J 6 HOH A 3 603 23 HOH HOH . J 6 HOH A 4 604 44 HOH HOH . J 6 HOH A 5 605 8 HOH HOH . J 6 HOH A 6 606 27 HOH HOH . J 6 HOH A 7 607 38 HOH HOH . J 6 HOH A 8 608 26 HOH HOH . J 6 HOH A 9 609 14 HOH HOH . J 6 HOH A 10 610 34 HOH HOH . J 6 HOH A 11 611 17 HOH HOH . J 6 HOH A 12 612 51 HOH HOH . J 6 HOH A 13 613 53 HOH HOH . J 6 HOH A 14 614 25 HOH HOH . J 6 HOH A 15 615 1 HOH HOH . J 6 HOH A 16 616 2 HOH HOH . J 6 HOH A 17 617 3 HOH HOH . J 6 HOH A 18 618 6 HOH HOH . J 6 HOH A 19 619 7 HOH HOH . J 6 HOH A 20 620 15 HOH HOH . J 6 HOH A 21 621 16 HOH HOH . J 6 HOH A 22 622 24 HOH HOH . J 6 HOH A 23 623 31 HOH HOH . J 6 HOH A 24 624 35 HOH HOH . J 6 HOH A 25 625 36 HOH HOH . J 6 HOH A 26 626 37 HOH HOH . J 6 HOH A 27 627 39 HOH HOH . J 6 HOH A 28 628 41 HOH HOH . J 6 HOH A 29 629 47 HOH HOH . J 6 HOH A 30 630 48 HOH HOH . K 6 HOH B 1 601 18 HOH HOH . K 6 HOH B 2 602 40 HOH HOH . K 6 HOH B 3 603 42 HOH HOH . K 6 HOH B 4 604 43 HOH HOH . K 6 HOH B 5 605 46 HOH HOH . K 6 HOH B 6 606 4 HOH HOH . K 6 HOH B 7 607 5 HOH HOH . K 6 HOH B 8 608 9 HOH HOH . K 6 HOH B 9 609 10 HOH HOH . K 6 HOH B 10 610 11 HOH HOH . K 6 HOH B 11 611 12 HOH HOH . K 6 HOH B 12 612 20 HOH HOH . K 6 HOH B 13 613 21 HOH HOH . K 6 HOH B 14 614 22 HOH HOH . K 6 HOH B 15 615 28 HOH HOH . K 6 HOH B 16 616 29 HOH HOH . K 6 HOH B 17 617 30 HOH HOH . K 6 HOH B 18 618 32 HOH HOH . K 6 HOH B 19 619 33 HOH HOH . K 6 HOH B 20 620 45 HOH HOH . K 6 HOH B 21 621 49 HOH HOH . K 6 HOH B 22 622 50 HOH HOH . K 6 HOH B 23 623 52 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 2 56.365 35.238 3.649 1 38.2 ? S SO4 501 A 1 HETATM 2 O O1 SO4 . . . C 2 57.347 34.824 2.625 1 39.54 ? O1 SO4 501 A 1 HETATM 3 O O2 SO4 . . . C 2 55.017 35.088 3.04 1 36.67 ? O2 SO4 501 A 1 HETATM 4 O O3 SO4 . . . C 2 56.507 34.434 4.88 1 38.71 ? O3 SO4 501 A 1 HETATM 5 O O4 SO4 . . . C 2 56.647 36.635 4.05 1 38.84 ? O4 SO4 501 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #