data_4P2Z # _model_server_result.job_id jCWrXouKqeenFeB4bESgkA _model_server_result.datetime_utc '2025-03-26 14:57:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4p2z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 4P2Z # _exptl.entry_id 4P2Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 546.646 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DODECAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4P2Z _cell.length_a 80.01 _cell.length_b 333.04 _cell.length_c 80.39 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4P2Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,O,P 1 1,2 C,D,I,J,K,L,M,N,Q,R 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_455 -x-1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 -80.01 0 40.195 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 I N N ? 2 N N N # _chem_comp.formula 'C24 H50 O13' _chem_comp.formula_weight 546.646 _chem_comp.id 12P _chem_comp.mon_nstd_flag . _chem_comp.name 'DODECAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O37 C36 12P sing 1 n n O37 H37 12P sing 2 n n C36 C35 12P sing 3 n n C36 H361 12P sing 4 n n C36 H362 12P sing 5 n n C35 O34 12P sing 6 n n C35 H351 12P sing 7 n n C35 H352 12P sing 8 n n O34 C33 12P sing 9 n n C33 C32 12P sing 10 n n C33 H331 12P sing 11 n n C33 H332 12P sing 12 n n C32 O31 12P sing 13 n n C32 H321 12P sing 14 n n C32 H322 12P sing 15 n n O31 C30 12P sing 16 n n C30 C29 12P sing 17 n n C30 H301 12P sing 18 n n C30 H302 12P sing 19 n n C29 O28 12P sing 20 n n C29 H291 12P sing 21 n n C29 H292 12P sing 22 n n O28 C27 12P sing 23 n n C27 C26 12P sing 24 n n C27 H271 12P sing 25 n n C27 H272 12P sing 26 n n C26 O25 12P sing 27 n n C26 H261 12P sing 28 n n C26 H262 12P sing 29 n n O25 C24 12P sing 30 n n C24 C23 12P sing 31 n n C24 H241 12P sing 32 n n C24 H242 12P sing 33 n n C23 O22 12P sing 34 n n C23 H231 12P sing 35 n n C23 H232 12P sing 36 n n O22 C21 12P sing 37 n n C21 C20 12P sing 38 n n C21 H211 12P sing 39 n n C21 H212 12P sing 40 n n C20 O19 12P sing 41 n n C20 H201 12P sing 42 n n C20 H202 12P sing 43 n n O19 C18 12P sing 44 n n C18 C17 12P sing 45 n n C18 H181 12P sing 46 n n C18 H182 12P sing 47 n n C17 O16 12P sing 48 n n C17 H171 12P sing 49 n n C17 H172 12P sing 50 n n O16 C15 12P sing 51 n n C15 C14 12P sing 52 n n C15 H151 12P sing 53 n n C15 H152 12P sing 54 n n C14 O13 12P sing 55 n n C14 H141 12P sing 56 n n C14 H142 12P sing 57 n n O13 C12 12P sing 58 n n C12 C11 12P sing 59 n n C12 H121 12P sing 60 n n C12 H122 12P sing 61 n n C11 O10 12P sing 62 n n C11 H111 12P sing 63 n n C11 H112 12P sing 64 n n O10 C9 12P sing 65 n n C9 C8 12P sing 66 n n C9 H91 12P sing 67 n n C9 H92 12P sing 68 n n C8 O7 12P sing 69 n n C8 H81 12P sing 70 n n C8 H82 12P sing 71 n n O7 C6 12P sing 72 n n C6 C5 12P sing 73 n n C6 H61 12P sing 74 n n C6 H62 12P sing 75 n n C5 O4 12P sing 76 n n C5 H51 12P sing 77 n n C5 H52 12P sing 78 n n O4 C3 12P sing 79 n n C3 C2 12P sing 80 n n C3 H31 12P sing 81 n n C3 H32 12P sing 82 n n C2 O1 12P sing 83 n n C2 H21 12P sing 84 n n C2 H22 12P sing 85 n n O1 HO1 12P sing 86 n n # _atom_sites.entry_id 4P2Z _atom_sites.fract_transf_matrix[1][1] 0.012498 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003003 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012439 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 12P A 1 301 251 12P 12P . F 3 NA A 1 302 301 NA NA . G 4 2CV B 1 301 250 2CV 2CV . H 4 2CV B 1 302 250 2CV 2CV . I 2 12P C 1 301 251 12P 12P . J 3 NA C 1 302 301 NA NA . K 3 NA C 1 303 302 NA NA . L 4 2CV D 1 301 250 2CV 2CV . M 4 2CV D 1 302 250 2CV 2CV . N 2 12P D 1 303 251 12P 12P . O 5 HOH A 1 401 10 HOH HOH . O 5 HOH A 2 402 5 HOH HOH . O 5 HOH A 3 403 6 HOH HOH . O 5 HOH A 4 404 7 HOH HOH . P 5 HOH B 1 401 2 HOH HOH . P 5 HOH B 2 402 8 HOH HOH . P 5 HOH B 3 403 9 HOH HOH . P 5 HOH B 4 404 12 HOH HOH . Q 5 HOH C 1 401 16 HOH HOH . Q 5 HOH C 2 402 1 HOH HOH . Q 5 HOH C 3 403 11 HOH HOH . Q 5 HOH C 4 404 13 HOH HOH . Q 5 HOH C 5 405 15 HOH HOH . R 5 HOH D 1 401 3 HOH HOH . R 5 HOH D 2 402 4 HOH HOH . R 5 HOH D 3 403 14 HOH HOH . R 5 HOH D 4 404 17 HOH HOH . R 5 HOH D 5 405 18 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O25 12P . . . E 2 -36.92 -72.584 44.52 1 101.49 ? O25 12P 301 A 1 HETATM 2 C C24 12P . . . E 2 -35.51 -72.717 44.646 1 101.97 ? C24 12P 301 A 1 HETATM 3 C C23 12P . . . E 2 -34.798 -71.803 43.691 1 100.04 ? C23 12P 301 A 1 HETATM 4 O O22 12P . . . E 2 -34.561 -70.535 44.301 1 99.79 ? O22 12P 301 A 1 HETATM 5 C C21 12P . . . E 2 -35.243 -69.446 43.685 1 97.79 ? C21 12P 301 A 1 HETATM 6 C C20 12P . . . E 2 -35.26 -68.267 44.601 1 98.05 ? C20 12P 301 A 1 HETATM 7 O O19 12P . . . E 2 -33.932 -67.843 44.884 1 96.72 ? O19 12P 301 A 1 HETATM 8 C C18 12P . . . E 2 -33.836 -66.479 45.278 1 96.64 ? C18 12P 301 A 1 HETATM 9 C C17 12P . . . E 2 -33.607 -65.638 44.076 1 94.54 ? C17 12P 301 A 1 HETATM 10 O O16 12P . . . E 2 -33.757 -64.262 44.389 1 96.15 ? O16 12P 301 A 1 HETATM 11 C C15 12P . . . E 2 -33.38 -63.416 43.311 1 96.27 ? C15 12P 301 A 1 HETATM 12 C C14 12P . . . E 2 -34.346 -62.279 43.146 1 98.41 ? C14 12P 301 A 1 HETATM 13 O O13 12P . . . E 2 -34.333 -61.789 41.802 1 97.99 ? O13 12P 301 A 1 HETATM 14 C C12 12P . . . E 2 -33.079 -61.254 41.367 1 97.79 ? C12 12P 301 A 1 HETATM 15 C C11 12P . . . E 2 -33.209 -60.655 39.999 1 96.81 ? C11 12P 301 A 1 HETATM 16 O O10 12P . . . E 2 -32.008 -60.862 39.26 1 93.96 ? O10 12P 301 A 1 HETATM 17 C C9 12P . . . E 2 -31.284 -59.671 38.986 1 95.69 ? C9 12P 301 A 1 HETATM 18 H H241 12P . . . E 2 -35.183 -73.742 44.479 1 102.22 ? H241 12P 301 A 1 HETATM 19 H H242 12P . . . E 2 -35.226 -72.481 45.67 1 103.62 ? H242 12P 301 A 1 HETATM 20 H H231 12P . . . E 2 -35.375 -71.695 42.773 1 98.89 ? H231 12P 301 A 1 HETATM 21 H H232 12P . . . E 2 -33.861 -72.264 43.384 1 99.81 ? H232 12P 301 A 1 HETATM 22 H H211 12P . . . E 2 -36.277 -69.703 43.458 1 97.95 ? H211 12P 301 A 1 HETATM 23 H H212 12P . . . E 2 -34.776 -69.194 42.735 1 96.35 ? H212 12P 301 A 1 HETATM 24 H H201 12P . . . E 2 -35.78 -68.503 45.528 1 99.7 ? H201 12P 301 A 1 HETATM 25 H H202 12P . . . E 2 -35.844 -67.476 44.132 1 98.03 ? H202 12P 301 A 1 HETATM 26 H H181 12P . . . E 2 -33.008 -66.327 45.969 1 97.9 ? H181 12P 301 A 1 HETATM 27 H H182 12P . . . E 2 -34.728 -66.161 45.816 1 98.05 ? H182 12P 301 A 1 HETATM 28 H H171 12P . . . E 2 -34.293 -65.912 43.276 1 93.34 ? H171 12P 301 A 1 HETATM 29 H H172 12P . . . E 2 -32.607 -65.846 43.698 1 93.67 ? H172 12P 301 A 1 HETATM 30 H H151 12P . . . E 2 -33.311 -63.958 42.369 1 94.26 ? H151 12P 301 A 1 HETATM 31 H H152 12P . . . E 2 -32.379 -63.032 43.499 1 97.08 ? H152 12P 301 A 1 HETATM 32 H H141 12P . . . E 2 -34.097 -61.463 43.823 1 100.83 ? H141 12P 301 A 1 HETATM 33 H H142 12P . . . E 2 -35.341 -62.616 43.432 1 98.49 ? H142 12P 301 A 1 HETATM 34 H H121 12P . . . E 2 -32.304 -62.018 41.336 1 96.23 ? H121 12P 301 A 1 HETATM 35 H H122 12P . . . E 2 -32.727 -60.501 42.069 1 100.17 ? H122 12P 301 A 1 HETATM 36 H H111 12P . . . E 2 -33.429 -59.591 40.082 1 99.38 ? H111 12P 301 A 1 HETATM 37 H H112 12P . . . E 2 -34.067 -61.09 39.488 1 95.98 ? H112 12P 301 A 1 HETATM 38 H H91 12P . . . E 2 -30.483 -59.865 38.274 1 94.69 ? H91 12P 301 A 1 HETATM 39 H H92 12P . . . E 2 -30.805 -59.317 39.898 1 97.31 ? H92 12P 301 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 39 #