data_4P2Z # _model_server_result.job_id pX1hdB0fTuX9sBSo-pqMfw _model_server_result.datetime_utc '2025-03-26 14:43:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4p2z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":303}' # _entry.id 4P2Z # _exptl.entry_id 4P2Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 546.646 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DODECAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4P2Z _cell.length_a 80.01 _cell.length_b 333.04 _cell.length_c 80.39 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4P2Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,O,P 1 1,2 C,D,I,J,K,L,M,N,Q,R 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_455 -x-1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 -80.01 0 40.195 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 I N N ? 2 N N N # _chem_comp.formula 'C24 H50 O13' _chem_comp.formula_weight 546.646 _chem_comp.id 12P _chem_comp.mon_nstd_flag . _chem_comp.name 'DODECAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O37 C36 12P sing 1 n n O37 H37 12P sing 2 n n C36 C35 12P sing 3 n n C36 H361 12P sing 4 n n C36 H362 12P sing 5 n n C35 O34 12P sing 6 n n C35 H351 12P sing 7 n n C35 H352 12P sing 8 n n O34 C33 12P sing 9 n n C33 C32 12P sing 10 n n C33 H331 12P sing 11 n n C33 H332 12P sing 12 n n C32 O31 12P sing 13 n n C32 H321 12P sing 14 n n C32 H322 12P sing 15 n n O31 C30 12P sing 16 n n C30 C29 12P sing 17 n n C30 H301 12P sing 18 n n C30 H302 12P sing 19 n n C29 O28 12P sing 20 n n C29 H291 12P sing 21 n n C29 H292 12P sing 22 n n O28 C27 12P sing 23 n n C27 C26 12P sing 24 n n C27 H271 12P sing 25 n n C27 H272 12P sing 26 n n C26 O25 12P sing 27 n n C26 H261 12P sing 28 n n C26 H262 12P sing 29 n n O25 C24 12P sing 30 n n C24 C23 12P sing 31 n n C24 H241 12P sing 32 n n C24 H242 12P sing 33 n n C23 O22 12P sing 34 n n C23 H231 12P sing 35 n n C23 H232 12P sing 36 n n O22 C21 12P sing 37 n n C21 C20 12P sing 38 n n C21 H211 12P sing 39 n n C21 H212 12P sing 40 n n C20 O19 12P sing 41 n n C20 H201 12P sing 42 n n C20 H202 12P sing 43 n n O19 C18 12P sing 44 n n C18 C17 12P sing 45 n n C18 H181 12P sing 46 n n C18 H182 12P sing 47 n n C17 O16 12P sing 48 n n C17 H171 12P sing 49 n n C17 H172 12P sing 50 n n O16 C15 12P sing 51 n n C15 C14 12P sing 52 n n C15 H151 12P sing 53 n n C15 H152 12P sing 54 n n C14 O13 12P sing 55 n n C14 H141 12P sing 56 n n C14 H142 12P sing 57 n n O13 C12 12P sing 58 n n C12 C11 12P sing 59 n n C12 H121 12P sing 60 n n C12 H122 12P sing 61 n n C11 O10 12P sing 62 n n C11 H111 12P sing 63 n n C11 H112 12P sing 64 n n O10 C9 12P sing 65 n n C9 C8 12P sing 66 n n C9 H91 12P sing 67 n n C9 H92 12P sing 68 n n C8 O7 12P sing 69 n n C8 H81 12P sing 70 n n C8 H82 12P sing 71 n n O7 C6 12P sing 72 n n C6 C5 12P sing 73 n n C6 H61 12P sing 74 n n C6 H62 12P sing 75 n n C5 O4 12P sing 76 n n C5 H51 12P sing 77 n n C5 H52 12P sing 78 n n O4 C3 12P sing 79 n n C3 C2 12P sing 80 n n C3 H31 12P sing 81 n n C3 H32 12P sing 82 n n C2 O1 12P sing 83 n n C2 H21 12P sing 84 n n C2 H22 12P sing 85 n n O1 HO1 12P sing 86 n n # _atom_sites.entry_id 4P2Z _atom_sites.fract_transf_matrix[1][1] 0.012498 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003003 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012439 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 12P A 1 301 251 12P 12P . F 3 NA A 1 302 301 NA NA . G 4 2CV B 1 301 250 2CV 2CV . H 4 2CV B 1 302 250 2CV 2CV . I 2 12P C 1 301 251 12P 12P . J 3 NA C 1 302 301 NA NA . K 3 NA C 1 303 302 NA NA . L 4 2CV D 1 301 250 2CV 2CV . M 4 2CV D 1 302 250 2CV 2CV . N 2 12P D 1 303 251 12P 12P . O 5 HOH A 1 401 10 HOH HOH . O 5 HOH A 2 402 5 HOH HOH . O 5 HOH A 3 403 6 HOH HOH . O 5 HOH A 4 404 7 HOH HOH . P 5 HOH B 1 401 2 HOH HOH . P 5 HOH B 2 402 8 HOH HOH . P 5 HOH B 3 403 9 HOH HOH . P 5 HOH B 4 404 12 HOH HOH . Q 5 HOH C 1 401 16 HOH HOH . Q 5 HOH C 2 402 1 HOH HOH . Q 5 HOH C 3 403 11 HOH HOH . Q 5 HOH C 4 404 13 HOH HOH . Q 5 HOH C 5 405 15 HOH HOH . R 5 HOH D 1 401 3 HOH HOH . R 5 HOH D 2 402 4 HOH HOH . R 5 HOH D 3 403 14 HOH HOH . R 5 HOH D 4 404 17 HOH HOH . R 5 HOH D 5 405 18 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O19 12P . . . N 2 -16.232 -89.92 26.159 1 97.33 ? O19 12P 303 D 1 HETATM 2 C C18 12P . . . N 2 -15.402 -90.547 27.125 1 96.7 ? C18 12P 303 D 1 HETATM 3 C C17 12P . . . N 2 -16.234 -91.061 28.253 1 93.41 ? C17 12P 303 D 1 HETATM 4 O O16 12P . . . N 2 -17.241 -91.93 27.75 1 89.81 ? O16 12P 303 D 1 HETATM 5 C C15 12P . . . N 2 -17.757 -92.835 28.72 1 85.81 ? C15 12P 303 D 1 HETATM 6 C C14 12P . . . N 2 -16.962 -94.106 28.718 1 82.28 ? C14 12P 303 D 1 HETATM 7 O O13 12P . . . N 2 -17.539 -95.044 29.622 1 76.31 ? O13 12P 303 D 1 HETATM 8 C C12 12P . . . N 2 -17.124 -96.386 29.394 1 70.28 ? C12 12P 303 D 1 HETATM 9 C C11 12P . . . N 2 -17.54 -97.239 30.541 1 64.81 ? C11 12P 303 D 1 HETATM 10 O O10 12P . . . N 2 -17.324 -98.602 30.228 1 62.23 ? O10 12P 303 D 1 HETATM 11 O O1 12P . . . N 2 -21.482 -105.239 34.65 1 56.71 ? O1 12P 303 D 1 HETATM 12 H H181 12P . . . N 2 -14.663 -89.851 27.521 1 98.57 ? H181 12P 303 D 1 HETATM 13 H H182 12P . . . N 2 -14.829 -91.351 26.665 1 96.75 ? H182 12P 303 D 1 HETATM 14 H H171 12P . . . N 2 -16.692 -90.239 28.802 1 93.74 ? H171 12P 303 D 1 HETATM 15 H H172 12P . . . N 2 -15.579 -91.568 28.96 1 93.62 ? H172 12P 303 D 1 HETATM 16 H H151 12P . . . N 2 -18.801 -93.062 28.508 1 84.77 ? H151 12P 303 D 1 HETATM 17 H H152 12P . . . N 2 -17.75 -92.38 29.71 1 86.14 ? H152 12P 303 D 1 HETATM 18 H H141 12P . . . N 2 -15.931 -93.916 29.014 1 83.57 ? H141 12P 303 D 1 HETATM 19 H H142 12P . . . N 2 -16.921 -94.495 27.701 1 82.48 ? H142 12P 303 D 1 HETATM 20 H H121 12P . . . N 2 -16.044 -96.447 29.268 1 71.23 ? H121 12P 303 D 1 HETATM 21 H H122 12P . . . N 2 -17.556 -96.766 28.47 1 69.91 ? H122 12P 303 D 1 HETATM 22 H H111 12P . . . N 2 -18.595 -97.081 30.763 1 63.85 ? H111 12P 303 D 1 HETATM 23 H H112 12P . . . N 2 -17 -96.939 31.437 1 65.37 ? H112 12P 303 D 1 HETATM 24 H HO1 12P . . . N 2 -22.058 -104.46 34.433 1 55.1 ? HO1 12P 303 D 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 24 #