data_4P38 # _model_server_result.job_id SMyLd4gaa6h4A1sUqDlJSw _model_server_result.datetime_utc '2024-12-10 19:26:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4p38 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 4P38 # _exptl.entry_id 4P38 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 421.532 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-[4-(2-adamantylcarbamoyl)-5-tert-butyl-pyrazol-1-yl]benzoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4P38 _cell.length_a 103.516 _cell.length_b 103.516 _cell.length_c 134.78 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4P38 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J 1 1 A,B,C,D,E,F,G,H,I,J 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 -x,-x+y,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 44.926667 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # _chem_comp.formula 'C25 H31 N3 O3' _chem_comp.formula_weight 421.532 _chem_comp.id 21T _chem_comp.mon_nstd_flag . _chem_comp.name '4-[4-(2-adamantylcarbamoyl)-5-tert-butyl-pyrazol-1-yl]benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C14 21T doub 1 n n C14 O2 21T sing 2 n n C14 C11 21T sing 3 n n C10 C11 21T doub 4 n y C10 C9 21T sing 5 n y C11 C12 21T sing 6 n y C9 C8 21T doub 7 n y C12 C13 21T doub 8 n y C8 C13 21T sing 9 n y C8 N2 21T sing 10 n n C1 C2 21T sing 11 n n C3 C2 21T sing 12 n n N2 N1 21T sing 13 n y N2 C5 21T sing 14 n y C2 C5 21T sing 15 n n C2 C4 21T sing 16 n n N1 C7 21T doub 17 n y C5 C6 21T doub 18 n y C19 C25 21T sing 19 n n C19 C18 21T sing 20 n n C19 C20 21T sing 21 n n C25 C24 21T sing 22 n n C18 C17 21T sing 23 n n C7 C6 21T sing 24 n y C6 C15 21T sing 25 n n C20 C21 21T sing 26 n n N3 C15 21T sing 27 n n N3 C16 21T sing 28 n n C24 C16 21T sing 29 n n C24 C23 21T sing 30 n n C17 C16 21T sing 31 n n C17 C22 21T sing 32 n n C15 O3 21T doub 33 n n C21 C23 21T sing 34 n n C21 C22 21T sing 35 n n C1 H1 21T sing 36 n n C1 H2 21T sing 37 n n C1 H3 21T sing 38 n n C3 H4 21T sing 39 n n C3 H5 21T sing 40 n n C3 H6 21T sing 41 n n C7 H7 21T sing 42 n n C9 H8 21T sing 43 n n C10 H9 21T sing 44 n n C12 H10 21T sing 45 n n C13 H11 21T sing 46 n n C16 H12 21T sing 47 n n C19 H13 21T sing 48 n n C20 H14 21T sing 49 n n C20 H15 21T sing 50 n n C21 H16 21T sing 51 n n C22 H17 21T sing 52 n n C22 H18 21T sing 53 n n C24 H19 21T sing 54 n n C4 H20 21T sing 55 n n C4 H21 21T sing 56 n n C4 H22 21T sing 57 n n O2 H23 21T sing 58 n n N3 H24 21T sing 59 n n C17 H25 21T sing 60 n n C18 H26 21T sing 61 n n C18 H27 21T sing 62 n n C23 H28 21T sing 63 n n C23 H29 21T sing 64 n n C25 H30 21T sing 65 n n C25 H31 21T sing 66 n n # _atom_sites.entry_id 4P38 _atom_sites.fract_transf_matrix[1][1] 0.00966 _atom_sites.fract_transf_matrix[1][2] 0.005577 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011155 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007419 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NDP A 1 301 300 NDP NAP . D 3 21T A 1 302 1 21T INH . E 4 CL A 1 303 1 CL CL . F 2 NDP B 1 301 301 NDP NAP . G 3 21T B 1 302 2 21T INH . H 4 CL B 1 303 2 CL CL . I 5 HOH A 1 401 22 HOH HOH . I 5 HOH A 2 402 2 HOH HOH . I 5 HOH A 3 403 4 HOH HOH . I 5 HOH A 4 404 6 HOH HOH . I 5 HOH A 5 405 10 HOH HOH . I 5 HOH A 6 406 11 HOH HOH . I 5 HOH A 7 407 12 HOH HOH . I 5 HOH A 8 408 13 HOH HOH . I 5 HOH A 9 409 14 HOH HOH . I 5 HOH A 10 410 15 HOH HOH . I 5 HOH A 11 411 16 HOH HOH . I 5 HOH A 12 412 17 HOH HOH . I 5 HOH A 13 413 26 HOH HOH . I 5 HOH A 14 414 29 HOH HOH . I 5 HOH A 15 415 31 HOH HOH . I 5 HOH A 16 416 33 HOH HOH . I 5 HOH A 17 417 36 HOH HOH . I 5 HOH A 18 418 38 HOH HOH . I 5 HOH A 19 419 39 HOH HOH . J 5 HOH B 1 401 19 HOH HOH . J 5 HOH B 2 402 23 HOH HOH . J 5 HOH B 3 403 18 HOH HOH . J 5 HOH B 4 404 1 HOH HOH . J 5 HOH B 5 405 8 HOH HOH . J 5 HOH B 6 406 24 HOH HOH . J 5 HOH B 7 407 28 HOH HOH . J 5 HOH B 8 408 34 HOH HOH . J 5 HOH B 9 409 40 HOH HOH . J 5 HOH B 10 410 41 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 21T . . . D 3 -6.198 55.866 17.781 1 67.54 ? C1 21T 302 A 1 HETATM 2 C C2 21T . . . D 3 -6.974 55.177 18.876 1 65.88 ? C2 21T 302 A 1 HETATM 3 C C3 21T . . . D 3 -7.251 53.75 18.464 1 62.64 ? C3 21T 302 A 1 HETATM 4 C C7 21T . . . D 3 -9.936 57.259 19.865 1 68.91 ? C7 21T 302 A 1 HETATM 5 C C8 21T . . . D 3 -9.882 54.851 17.395 1 70.76 ? C8 21T 302 A 1 HETATM 6 C C9 21T . . . D 3 -9.33 55.078 16.149 1 72.52 ? C9 21T 302 A 1 HETATM 7 C C10 21T . . . D 3 -9.687 54.305 15.078 1 72.91 ? C10 21T 302 A 1 HETATM 8 C C11 21T . . . D 3 -10.62 53.308 15.228 1 76.14 ? C11 21T 302 A 1 HETATM 9 C C12 21T . . . D 3 -11.205 53.086 16.469 1 71.58 ? C12 21T 302 A 1 HETATM 10 C C13 21T . . . D 3 -10.842 53.871 17.556 1 69.83 ? C13 21T 302 A 1 HETATM 11 C C14 21T . . . D 3 -10.998 52.497 14.054 1 83.68 ? C14 21T 302 A 1 HETATM 12 C C15 21T . . . D 3 -7.684 57.554 21 1 63.85 ? C15 21T 302 A 1 HETATM 13 C C16 21T . . . D 3 -5.58 58.769 21.159 1 68.61 ? C16 21T 302 A 1 HETATM 14 C C19 21T . . . D 3 -3.676 59.882 19.241 1 68.63 ? C19 21T 302 A 1 HETATM 15 C C20 21T . . . D 3 -2.732 60.592 20.19 1 70.11 ? C20 21T 302 A 1 HETATM 16 C C21 21T . . . D 3 -3.2 60.392 21.615 1 69.36 ? C21 21T 302 A 1 HETATM 17 C C22 21T . . . D 3 -3.215 58.909 21.938 1 70.74 ? C22 21T 302 A 1 HETATM 18 C C24 21T . . . D 3 -5.543 60.269 20.824 1 69.23 ? C24 21T 302 A 1 HETATM 19 C C4 21T . . . D 3 -6.131 55.136 20.128 1 60.44 ? C4 21T 302 A 1 HETATM 20 C C5 21T . . . D 3 -8.291 55.932 19.138 1 66.85 ? C5 21T 302 A 1 HETATM 21 C C6 21T . . . D 3 -8.591 56.951 20.064 1 67.58 ? C6 21T 302 A 1 HETATM 22 N N1 21T . . . D 3 -10.513 56.548 18.921 1 68 ? N1 21T 302 A 1 HETATM 23 N N2 21T . . . D 3 -9.509 55.714 18.474 1 67.55 ? N2 21T 302 A 1 HETATM 24 O O1 21T . . . D 3 -10.728 53.005 12.929 1 83.45 ? O1 21T 302 A 1 HETATM 25 O O2 21T . . . D 3 -11.559 51.389 14.277 1 88.81 ? O2 21T 302 A 1 HETATM 26 O O3 21T . . . D 3 -7.907 57.593 22.194 1 63.6 ? O3 21T 302 A 1 HETATM 27 N N3 21T . . . D 3 -6.592 58.104 20.377 1 63.34 ? N3 21T 302 A 1 HETATM 28 C C17 21T . . . D 3 -4.168 58.181 20.978 1 69.7 ? C17 21T 302 A 1 HETATM 29 C C18 21T . . . D 3 -3.692 58.399 19.552 1 67.15 ? C18 21T 302 A 1 HETATM 30 C C23 21T . . . D 3 -4.59 60.97 21.772 1 67.64 ? C23 21T 302 A 1 HETATM 31 C C25 21T . . . D 3 -5.07 60.456 19.397 1 67.94 ? C25 21T 302 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 31 #