data_4P4V # _model_server_result.job_id 49JczYI3D1H8hH9Uoyfq3A _model_server_result.datetime_utc '2024-11-12 20:43:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4p4v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":101}' # _entry.id 4P4V # _exptl.entry_id 4P4V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4P4V _cell.length_a 62.03 _cell.length_b 62.03 _cell.length_c 44.676 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4P4V _symmetry.cell_setting . _symmetry.Int_Tables_number 93 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 42 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_455 -x-1,y,-z -1 0 0 0 1 0 0 0 -1 -62.03 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 F N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ORN 1 A ORN 1 1_555 A N TYR 2 A TYR 2 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.366 ? covale ? covale2 A C ORN 1 A ORN 1 1_555 A N TYR 2 A TYR 2 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.374 ? covale ? covale3 A NE ORN 1 A ORN 1 1_555 A C LYS 16 A LYS 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.377 ? covale ? covale4 A C LEU 4 A LEU 4 1_555 A N PHI 5 A PHI 5 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 A C LEU 4 A LEU 4 1_555 A N PHI 5 A PHI 5 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale6 A C PHI 5 A PHI 5 1_555 A N TYR 6 A TYR 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale7 A C GLU 8 A GLU 8 1_555 A NE ORN 9 A ORN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.377 ? covale ? covale8 A C ORN 9 A ORN 9 1_555 A N LYS 10 A LYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.372 ? covale ? covale9 A C ALA 12 A ALA 12 1_555 A N MAA 13 A MAA 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale10 A C MAA 13 A MAA 13 1_555 A N ALA 14 A ALA 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale11 B C ORN 1 B ORN 1 1_555 B N TYR 2 B TYR 2 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.375 ? covale ? covale12 B C ORN 1 B ORN 1 1_555 B N TYR 2 B TYR 2 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.37 ? covale ? covale13 B NE ORN 1 B ORN 1 1_555 B C LYS 16 B LYS 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? covale ? covale14 B C LEU 4 B LEU 4 1_555 B N PHI 5 B PHI 5 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale15 B C LEU 4 B LEU 4 1_555 B N PHI 5 B PHI 5 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale16 B C PHI 5 B PHI 5 1_555 B N TYR 6 B TYR 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale17 B C GLU 8 B GLU 8 1_555 B NE ORN 9 B ORN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.376 ? covale ? covale18 B C ORN 9 B ORN 9 1_555 B N LYS 10 B LYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? covale ? covale19 B C ALA 12 B ALA 12 1_555 B N MAA 13 B MAA 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale20 B C MAA 13 B MAA 13 1_555 B N ALA 14 B ALA 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale21 C C ORN 1 C ORN 1 1_555 C N TYR 2 C TYR 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.37 ? covale ? covale22 C NE ORN 1 C ORN 1 1_555 C C LYS 16 C LYS 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.38 ? covale ? covale23 C C LEU 4 C LEU 4 1_555 C N PHI 5 C PHI 5 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale24 C C LEU 4 C LEU 4 1_555 C N PHI 5 C PHI 5 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale25 C C PHI 5 C PHI 5 1_555 C N TYR 6 C TYR 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale26 C C GLU 8 C GLU 8 1_555 C NE ORN 9 C ORN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? covale ? covale27 C C ORN 9 C ORN 9 1_555 C N LYS 10 C LYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.372 ? covale ? covale28 C C ALA 12 C ALA 12 1_555 C N MAA 13 C MAA 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale29 C C MAA 13 C MAA 13 1_555 C N ALA 14 C ALA 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 136 n n S O2 SO4 doub 137 n n S O3 SO4 sing 138 n n S O4 SO4 sing 139 n n # _atom_sites.entry_id 4P4V _atom_sites.fract_transf_matrix[1][1] 0.016121 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016121 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022383 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 SO4 A 1 101 2 SO4 SO4 . E 3 CL A 1 102 2 CL CL . F 2 SO4 B 1 101 3 SO4 SO4 . G 3 CL B 1 102 3 CL CL . H 2 SO4 C 1 101 1 SO4 SO4 . I 3 CL C 1 102 1 CL CL . J 4 HOH A 1 201 3 HOH HOH . J 4 HOH A 2 202 9 HOH HOH . J 4 HOH A 3 203 16 HOH HOH . J 4 HOH A 4 204 15 HOH HOH . J 4 HOH A 5 205 7 HOH HOH . K 4 HOH B 1 201 2 HOH HOH . K 4 HOH B 2 202 1 HOH HOH . K 4 HOH B 3 203 11 HOH HOH . K 4 HOH B 4 204 12 HOH HOH . L 4 HOH C 1 201 8 HOH HOH . L 4 HOH C 2 202 4 HOH HOH . L 4 HOH C 3 203 10 HOH HOH . L 4 HOH C 4 204 13 HOH HOH . L 4 HOH C 5 205 5 HOH HOH . L 4 HOH C 6 206 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . F 2 -28.967 2.037 8.427 1 88.2 ? S SO4 101 B 1 HETATM 2 O O1 SO4 . . . F 2 -27.628 1.522 8.702 1 89.41 ? O1 SO4 101 B 1 HETATM 3 O O2 SO4 . . . F 2 -29.087 2.357 7.007 1 80.67 ? O2 SO4 101 B 1 HETATM 4 O O3 SO4 . . . F 2 -29.966 1.029 8.773 1 91.34 ? O3 SO4 101 B 1 HETATM 5 O O4 SO4 . . . F 2 -29.19 3.234 9.232 1 92.59 ? O4 SO4 101 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #