data_4P4Y # _model_server_result.job_id vF1h8GJNlu3c8RQh8_LIdw _model_server_result.datetime_utc '2024-11-12 20:39:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4p4y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":102}' # _entry.id 4P4Y # _exptl.entry_id 4P4Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4P4Y _cell.length_a 66.26 _cell.length_b 66.26 _cell.length_c 154.63 _cell.Z_PDB 126 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4P4Y _symmetry.cell_setting . _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA hexameric 6 author_and_software_defined_assembly 1 PISA hexameric 6 author_and_software_defined_assembly 2 PISA hexameric 6 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,H,I,J,K,O,P,Q 1 1,4 D,E,F,L,M,R,S,T 2 1,7 G,N,U 3 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 154.63 5 'crystal symmetry operation' 5_556 x-y,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 154.63 6 'crystal symmetry operation' 6_556 -x,-x+y,-z+1 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 154.63 7 'crystal symmetry operation' 11_566 x-y+2/3,-y+4/3,-z+4/3 1 0 0 0 -1 0 0 0 -1 0 76.510458 206.173333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 J N N ? 3 K N N ? 3 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ORN 1 A ORN 1 1_555 A N TYR 2 A TYR 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? covale ? covale2 A NE ORN 1 A ORN 1 1_555 A C LYS 16 A LYS 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? covale ? covale3 A C LEU 4 A LEU 4 1_555 A N PHI 5 A PHI 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale4 A C PHI 5 A PHI 5 1_555 A N TYR 6 A TYR 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale5 A C GLU 8 A GLU 8 1_555 A NE ORN 9 A ORN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? covale ? covale6 A C ORN 9 A ORN 9 1_555 A N LYS 10 A LYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.363 ? covale ? covale7 A C THR 12 A THR 12 1_555 A N MAA 13 A MAA 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale8 A C MAA 13 A MAA 13 1_555 A N THR 14 A THR 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale9 B C ORN 1 B ORN 1 1_555 B N TYR 2 B TYR 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.362 ? covale ? covale10 B NE ORN 1 B ORN 1 1_555 B C LYS 16 B LYS 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? covale ? covale11 B C LEU 4 B LEU 4 1_555 B N PHI 5 B PHI 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale12 B C PHI 5 B PHI 5 1_555 B N TYR 6 B TYR 6 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.324 ? covale ? covale13 B C PHI 5 B PHI 5 1_555 B N TYR 6 B TYR 6 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.332 ? covale ? covale14 B C GLU 8 B GLU 8 1_555 B NE ORN 9 B ORN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.372 ? covale ? covale15 B C ORN 9 B ORN 9 1_555 B N LYS 10 B LYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.356 ? covale ? covale16 B C THR 12 B THR 12 1_555 B N MAA 13 B MAA 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale17 B C MAA 13 B MAA 13 1_555 B N THR 14 B THR 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale18 C C ORN 1 C ORN 1 1_555 C N TYR 2 C TYR 2 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.362 ? covale ? covale19 C C ORN 1 C ORN 1 1_555 C N TYR 2 C TYR 2 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.371 ? covale ? covale20 C NE ORN 1 C ORN 1 1_555 C C LYS 16 C LYS 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.365 ? covale ? covale21 C C LEU 4 C LEU 4 1_555 C N PHI 5 C PHI 5 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale22 C C LEU 4 C LEU 4 1_555 C N PHI 5 C PHI 5 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale23 C C PHI 5 C PHI 5 1_555 C N TYR 6 C TYR 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale24 C C GLU 8 C GLU 8 1_555 C NE ORN 9 C ORN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.369 ? covale ? covale25 C C ORN 9 C ORN 9 1_555 C N LYS 10 C LYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.368 ? covale ? covale26 C C THR 12 C THR 12 1_555 C N MAA 13 C MAA 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale27 C C MAA 13 C MAA 13 1_555 C N THR 14 C THR 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale28 D C ORN 1 D ORN 1 1_555 D N TYR 2 D TYR 2 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.373 ? covale ? covale29 D C ORN 1 D ORN 1 1_555 D N TYR 2 D TYR 2 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.366 ? covale ? covale30 D NE ORN 1 D ORN 1 1_555 D C LYS 16 D LYS 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? covale ? covale31 D C LEU 4 D LEU 4 1_555 D N PHI 5 D PHI 5 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale32 D C LEU 4 D LEU 4 1_555 D N PHI 5 D PHI 5 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale33 D C PHI 5 D PHI 5 1_555 D N TYR 6 D TYR 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale34 D C GLU 8 D GLU 8 1_555 D NE ORN 9 D ORN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? covale ? covale35 D C ORN 9 D ORN 9 1_555 D N LYS 10 D LYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.363 ? covale ? covale36 D C THR 12 D THR 12 1_555 D N MAA 13 D MAA 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale37 D C MAA 13 D MAA 13 1_555 D N THR 14 D THR 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale38 E C ORN 1 E ORN 1 1_555 E N TYR 2 E TYR 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.368 ? covale ? covale39 E NE ORN 1 E ORN 1 1_555 E C LYS 16 E LYS 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.369 ? covale ? covale40 E C LEU 4 E LEU 4 1_555 E N PHI 5 E PHI 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale41 E C PHI 5 E PHI 5 1_555 E N TYR 6 E TYR 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale42 E C GLU 8 E GLU 8 1_555 E NE ORN 9 E ORN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.371 ? covale ? covale43 E C ORN 9 E ORN 9 1_555 E N LYS 10 E LYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.365 ? covale ? covale44 E C THR 12 E THR 12 1_555 E N MAA 13 E MAA 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale45 E C MAA 13 E MAA 13 1_555 E N THR 14 E THR 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale46 F C ORN 1 F ORN 1 1_555 F N TYR 2 F TYR 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.377 ? covale ? covale47 F NE ORN 1 F ORN 1 1_555 F C LYS 16 F LYS 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.384 ? covale ? covale48 F C LEU 4 F LEU 4 1_555 F N PHI 5 F PHI 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale49 F C PHI 5 F PHI 5 1_555 F N TYR 6 F TYR 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale50 F C GLU 8 F GLU 8 1_555 F NE ORN 9 F ORN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.373 ? covale ? covale51 F C ORN 9 F ORN 9 1_555 F N LYS 10 F LYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.362 ? covale ? covale52 F C THR 12 F THR 12 1_555 F N MAA 13 F MAA 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale53 F C MAA 13 F MAA 13 1_555 F N THR 14 F THR 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale54 G C ORN 1 G ORN 1 1_555 G N TYR 2 G TYR 2 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.364 ? covale ? covale55 G C ORN 1 G ORN 1 1_555 G N TYR 2 G TYR 2 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.371 ? covale ? covale56 G NE ORN 1 G ORN 1 1_555 G C LYS 16 G LYS 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.358 ? covale ? covale57 G C LEU 4 G LEU 4 1_555 G N PHI 5 G PHI 5 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale58 G C LEU 4 G LEU 4 1_555 G N PHI 5 G PHI 5 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale59 G C PHI 5 G PHI 5 1_555 G N TYR 6 G TYR 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale60 G C GLU 8 G GLU 8 1_555 G NE ORN 9 G ORN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? covale ? covale61 G C ORN 9 G ORN 9 1_555 G N LYS 10 G LYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.372 ? covale ? covale62 G C THR 12 G THR 12 1_555 G N MAA 13 G MAA 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale63 G C MAA 13 G MAA 13 1_555 G N THR 14 G THR 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4P4Y _atom_sites.fract_transf_matrix[1][1] 0.015092 _atom_sites.fract_transf_matrix[1][2] 0.008713 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017427 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006467 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 2 SO4 A 1 101 1 SO4 SO4 . I 3 CL B 1 101 1 CL CL . J 3 CL C 1 101 3 CL CL . K 3 CL C 1 102 4 CL CL . L 2 SO4 D 1 101 2 SO4 SO4 . M 2 SO4 D 1 102 3 SO4 SO4 . N 3 CL G 1 101 2 CL CL . O 4 HOH A 1 201 41 HOH HOH . O 4 HOH A 2 202 78 HOH HOH . O 4 HOH A 3 203 10 HOH HOH . O 4 HOH A 4 204 15 HOH HOH . O 4 HOH A 5 205 58 HOH HOH . O 4 HOH A 6 206 49 HOH HOH . O 4 HOH A 7 207 13 HOH HOH . O 4 HOH A 8 208 44 HOH HOH . O 4 HOH A 9 209 69 HOH HOH . O 4 HOH A 10 210 37 HOH HOH . O 4 HOH A 11 211 53 HOH HOH . O 4 HOH A 12 212 55 HOH HOH . O 4 HOH A 13 213 63 HOH HOH . O 4 HOH A 14 214 18 HOH HOH . O 4 HOH A 15 215 39 HOH HOH . O 4 HOH A 16 216 64 HOH HOH . O 4 HOH A 17 217 76 HOH HOH . P 4 HOH B 1 201 75 HOH HOH . P 4 HOH B 2 202 29 HOH HOH . P 4 HOH B 3 203 17 HOH HOH . P 4 HOH B 4 204 27 HOH HOH . P 4 HOH B 5 205 46 HOH HOH . P 4 HOH B 6 206 7 HOH HOH . P 4 HOH B 7 207 25 HOH HOH . P 4 HOH B 8 208 45 HOH HOH . P 4 HOH B 9 209 50 HOH HOH . P 4 HOH B 10 210 60 HOH HOH . P 4 HOH B 11 211 79 HOH HOH . Q 4 HOH C 1 201 43 HOH HOH . Q 4 HOH C 2 202 70 HOH HOH . Q 4 HOH C 3 203 28 HOH HOH . Q 4 HOH C 4 204 6 HOH HOH . Q 4 HOH C 5 205 1 HOH HOH . Q 4 HOH C 6 206 54 HOH HOH . Q 4 HOH C 7 207 80 HOH HOH . Q 4 HOH C 8 208 40 HOH HOH . Q 4 HOH C 9 209 20 HOH HOH . Q 4 HOH C 10 210 65 HOH HOH . R 4 HOH D 1 201 9 HOH HOH . R 4 HOH D 2 202 21 HOH HOH . R 4 HOH D 3 203 77 HOH HOH . R 4 HOH D 4 204 19 HOH HOH . R 4 HOH D 5 205 30 HOH HOH . R 4 HOH D 6 206 42 HOH HOH . R 4 HOH D 7 207 16 HOH HOH . R 4 HOH D 8 208 22 HOH HOH . R 4 HOH D 9 209 24 HOH HOH . S 4 HOH E 1 101 12 HOH HOH . S 4 HOH E 2 102 38 HOH HOH . S 4 HOH E 3 103 71 HOH HOH . S 4 HOH E 4 104 3 HOH HOH . S 4 HOH E 5 105 36 HOH HOH . S 4 HOH E 6 106 68 HOH HOH . S 4 HOH E 7 107 56 HOH HOH . S 4 HOH E 8 108 32 HOH HOH . S 4 HOH E 9 109 61 HOH HOH . S 4 HOH E 10 110 11 HOH HOH . S 4 HOH E 11 111 73 HOH HOH . T 4 HOH F 1 101 72 HOH HOH . T 4 HOH F 2 102 14 HOH HOH . T 4 HOH F 3 103 4 HOH HOH . T 4 HOH F 4 104 48 HOH HOH . T 4 HOH F 5 105 66 HOH HOH . T 4 HOH F 6 106 8 HOH HOH . T 4 HOH F 7 107 35 HOH HOH . T 4 HOH F 8 108 51 HOH HOH . T 4 HOH F 9 109 52 HOH HOH . T 4 HOH F 10 110 59 HOH HOH . U 4 HOH G 1 201 33 HOH HOH . U 4 HOH G 2 202 57 HOH HOH . U 4 HOH G 3 203 74 HOH HOH . U 4 HOH G 4 204 5 HOH HOH . U 4 HOH G 5 205 26 HOH HOH . U 4 HOH G 6 206 67 HOH HOH . U 4 HOH G 7 207 62 HOH HOH . U 4 HOH G 8 208 34 HOH HOH . U 4 HOH G 9 209 47 HOH HOH . U 4 HOH G 10 210 2 HOH HOH . U 4 HOH G 11 211 23 HOH HOH . U 4 HOH G 12 212 31 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 3 _atom_site.Cartn_x 12.84 _atom_site.Cartn_y 42.291 _atom_site.Cartn_z 70.709 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 73.5 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 102 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #