data_4P5O # _model_server_result.job_id Bxp5kX-q_cEgDkUtKGGlYA _model_server_result.datetime_utc '2024-11-21 17:53:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4p5o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":203}' # _entry.id 4P5O # _exptl.entry_id 4P5O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.79 _cell.angle_gamma 90 _cell.entry_id 4P5O _cell.length_a 89.105 _cell.length_b 129.606 _cell.length_c 119.94 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4P5O _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? pentameric 5 author_defined_assembly 1 ? pentameric 5 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,K,L,M 1 1 F,G,H,I,J,N,O,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 K N N ? 6 L N N ? 6 M N N ? 6 N N N ? 6 O N N ? 6 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 D C AME 1 I AME 1 1_555 D N ILE 2 I ILE 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 I C AME 1 G AME 1 1_555 I N ILE 2 G ILE 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? metalc ? metalc1 B SG CYS 40 B CYS 42 1_555 K ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc2 B SG CYS 43 B CYS 45 1_555 K ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc3 B SG CYS 51 B CYS 53 1_555 M ZN ZN . B ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc4 B SG CYS 54 B CYS 56 1_555 M ZN ZN . B ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc5 B SG CYS 66 B CYS 68 1_555 M ZN ZN . B ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc6 B SG CYS 73 B CYS 75 1_555 L ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc7 B ND1 HIS 75 B HIS 77 1_555 L ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc8 B ND1 HIS 78 B HIS 80 1_555 K ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc9 B ND1 HIS 80 B HIS 82 1_555 M ZN ZN . B ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc10 B SG CYS 81 B CYS 83 1_555 K ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc11 B SG CYS 92 B CYS 94 1_555 L ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc12 B OD2 ASP 95 B ASP 97 1_555 L ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? metalc ? metalc13 G SG CYS 40 D CYS 42 1_555 N ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc14 G SG CYS 43 D CYS 45 1_555 N ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc15 G SG CYS 51 D CYS 53 1_555 P ZN ZN . D ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc16 G SG CYS 54 D CYS 56 1_555 P ZN ZN . D ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc17 G SG CYS 66 D CYS 68 1_555 P ZN ZN . D ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc18 G SG CYS 73 D CYS 75 1_555 O ZN ZN . D ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc19 G ND1 HIS 75 D HIS 77 1_555 O ZN ZN . D ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc20 G ND1 HIS 78 D HIS 80 1_555 N ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? metalc ? metalc21 G ND1 HIS 80 D HIS 82 1_555 P ZN ZN . D ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc22 G SG CYS 81 D CYS 83 1_555 N ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc23 G SG CYS 92 D CYS 94 1_555 O ZN ZN . D ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc24 G OD2 ASP 95 D ASP 97 1_555 O ZN ZN . D ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4P5O _atom_sites.fract_transf_matrix[1][1] 0.011223 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004486 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007716 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008979 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code K 6 ZN B 1 201 202 ZN ZN . L 6 ZN B 1 202 206 ZN ZN . M 6 ZN B 1 203 210 ZN ZN . N 6 ZN D 1 201 202 ZN ZN . O 6 ZN D 1 202 206 ZN ZN . P 6 ZN D 1 203 210 ZN ZN . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id M _atom_site.label_entity_id 6 _atom_site.Cartn_x 18.954 _atom_site.Cartn_y -9.762 _atom_site.Cartn_z 40.997 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 109.67 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 203 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #