data_4P8N # _model_server_result.job_id JG57wZjjTHNQWjnfjpTjgg _model_server_result.datetime_utc '2024-10-28 02:21:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4p8n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":503}' # _entry.id 4P8N # _exptl.entry_id 4P8N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.04 _cell.angle_gamma 90 _cell.entry_id 4P8N _cell.length_a 77.242 _cell.length_b 83.219 _cell.length_c 80.755 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4P8N _symmetry.cell_setting . _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 software_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,H 1 1 B,E,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 264 n y N1 C5 IMD sing 265 n y N1 HN1 IMD sing 266 n n C2 N3 IMD doub 267 n y C2 H2 IMD sing 268 n n N3 C4 IMD sing 269 n y N3 HN3 IMD sing 270 n n C4 C5 IMD doub 271 n y C4 H4 IMD sing 272 n n C5 H5 IMD sing 273 n n # _atom_sites.entry_id 4P8N _atom_sites.fract_transf_matrix[1][1] 0.012946 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002999 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012016 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012711 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 501 501 FAD FAD . D 3 R57 A 1 502 550 R57 R57 . E 2 FAD B 1 501 501 FAD FAD . F 3 R57 B 1 502 550 R57 R57 . G 4 IMD B 1 503 1 IMD IMD . H 5 HOH A 1 601 157 HOH HOH . H 5 HOH A 2 602 71 HOH HOH . H 5 HOH A 3 603 32 HOH HOH . H 5 HOH A 4 604 33 HOH HOH . H 5 HOH A 5 605 126 HOH HOH . H 5 HOH A 6 606 18 HOH HOH . H 5 HOH A 7 607 220 HOH HOH . H 5 HOH A 8 608 206 HOH HOH . H 5 HOH A 9 609 40 HOH HOH . H 5 HOH A 10 610 256 HOH HOH . H 5 HOH A 11 611 24 HOH HOH . H 5 HOH A 12 612 98 HOH HOH . H 5 HOH A 13 613 132 HOH HOH . H 5 HOH A 14 614 113 HOH HOH . H 5 HOH A 15 615 317 HOH HOH . H 5 HOH A 16 616 212 HOH HOH . H 5 HOH A 17 617 299 HOH HOH . H 5 HOH A 18 618 300 HOH HOH . H 5 HOH A 19 619 9 HOH HOH . H 5 HOH A 20 620 188 HOH HOH . H 5 HOH A 21 621 181 HOH HOH . H 5 HOH A 22 622 305 HOH HOH . H 5 HOH A 23 623 302 HOH HOH . H 5 HOH A 24 624 127 HOH HOH . H 5 HOH A 25 625 28 HOH HOH . H 5 HOH A 26 626 291 HOH HOH . H 5 HOH A 27 627 116 HOH HOH . H 5 HOH A 28 628 295 HOH HOH . H 5 HOH A 29 629 218 HOH HOH . H 5 HOH A 30 630 107 HOH HOH . H 5 HOH A 31 631 245 HOH HOH . H 5 HOH A 32 632 133 HOH HOH . H 5 HOH A 33 633 161 HOH HOH . H 5 HOH A 34 634 39 HOH HOH . H 5 HOH A 35 635 118 HOH HOH . H 5 HOH A 36 636 11 HOH HOH . H 5 HOH A 37 637 141 HOH HOH . H 5 HOH A 38 638 139 HOH HOH . H 5 HOH A 39 639 258 HOH HOH . H 5 HOH A 40 640 179 HOH HOH . H 5 HOH A 41 641 170 HOH HOH . H 5 HOH A 42 642 38 HOH HOH . H 5 HOH A 43 643 131 HOH HOH . H 5 HOH A 44 644 87 HOH HOH . H 5 HOH A 45 645 156 HOH HOH . H 5 HOH A 46 646 130 HOH HOH . H 5 HOH A 47 647 140 HOH HOH . H 5 HOH A 48 648 44 HOH HOH . H 5 HOH A 49 649 42 HOH HOH . H 5 HOH A 50 650 1 HOH HOH . H 5 HOH A 51 651 2 HOH HOH . H 5 HOH A 52 652 4 HOH HOH . H 5 HOH A 53 653 5 HOH HOH . H 5 HOH A 54 654 7 HOH HOH . H 5 HOH A 55 655 8 HOH HOH . H 5 HOH A 56 656 10 HOH HOH . H 5 HOH A 57 657 13 HOH HOH . H 5 HOH A 58 658 14 HOH HOH . H 5 HOH A 59 659 16 HOH HOH . H 5 HOH A 60 660 17 HOH HOH . H 5 HOH A 61 661 21 HOH HOH . H 5 HOH A 62 662 22 HOH HOH . H 5 HOH A 63 663 26 HOH HOH . H 5 HOH A 64 664 27 HOH HOH . H 5 HOH A 65 665 29 HOH HOH . H 5 HOH A 66 666 30 HOH HOH . H 5 HOH A 67 667 31 HOH HOH . H 5 HOH A 68 668 36 HOH HOH . H 5 HOH A 69 669 37 HOH HOH . H 5 HOH A 70 670 41 HOH HOH . H 5 HOH A 71 671 43 HOH HOH . H 5 HOH A 72 672 45 HOH HOH . H 5 HOH A 73 673 46 HOH HOH . H 5 HOH A 74 674 47 HOH HOH . H 5 HOH A 75 675 48 HOH HOH . H 5 HOH A 76 676 49 HOH HOH . H 5 HOH A 77 677 51 HOH HOH . H 5 HOH A 78 678 52 HOH HOH . H 5 HOH A 79 679 54 HOH HOH . H 5 HOH A 80 680 55 HOH HOH . H 5 HOH A 81 681 56 HOH HOH . H 5 HOH A 82 682 57 HOH HOH . H 5 HOH A 83 683 61 HOH HOH . H 5 HOH A 84 684 62 HOH HOH . H 5 HOH A 85 685 63 HOH HOH . H 5 HOH A 86 686 65 HOH HOH . H 5 HOH A 87 687 66 HOH HOH . H 5 HOH A 88 688 68 HOH HOH . H 5 HOH A 89 689 69 HOH HOH . H 5 HOH A 90 690 70 HOH HOH . H 5 HOH A 91 691 72 HOH HOH . H 5 HOH A 92 692 73 HOH HOH . H 5 HOH A 93 693 75 HOH HOH . H 5 HOH A 94 694 76 HOH HOH . H 5 HOH A 95 695 78 HOH HOH . H 5 HOH A 96 696 80 HOH HOH . H 5 HOH A 97 697 84 HOH HOH . H 5 HOH A 98 698 85 HOH HOH . H 5 HOH A 99 699 86 HOH HOH . H 5 HOH A 100 700 89 HOH HOH . H 5 HOH A 101 701 90 HOH HOH . H 5 HOH A 102 702 92 HOH HOH . H 5 HOH A 103 703 95 HOH HOH . H 5 HOH A 104 704 97 HOH HOH . H 5 HOH A 105 705 99 HOH HOH . H 5 HOH A 106 706 102 HOH HOH . H 5 HOH A 107 707 104 HOH HOH . H 5 HOH A 108 708 106 HOH HOH . H 5 HOH A 109 709 108 HOH HOH . H 5 HOH A 110 710 110 HOH HOH . H 5 HOH A 111 711 112 HOH HOH . H 5 HOH A 112 712 117 HOH HOH . H 5 HOH A 113 713 119 HOH HOH . H 5 HOH A 114 714 120 HOH HOH . H 5 HOH A 115 715 121 HOH HOH . H 5 HOH A 116 716 122 HOH HOH . H 5 HOH A 117 717 124 HOH HOH . H 5 HOH A 118 718 125 HOH HOH . H 5 HOH A 119 719 128 HOH HOH . H 5 HOH A 120 720 135 HOH HOH . H 5 HOH A 121 721 136 HOH HOH . H 5 HOH A 122 722 137 HOH HOH . H 5 HOH A 123 723 138 HOH HOH . H 5 HOH A 124 724 143 HOH HOH . H 5 HOH A 125 725 144 HOH HOH . H 5 HOH A 126 726 145 HOH HOH . H 5 HOH A 127 727 147 HOH HOH . H 5 HOH A 128 728 152 HOH HOH . H 5 HOH A 129 729 154 HOH HOH . H 5 HOH A 130 730 155 HOH HOH . H 5 HOH A 131 731 158 HOH HOH . H 5 HOH A 132 732 159 HOH HOH . H 5 HOH A 133 733 160 HOH HOH . H 5 HOH A 134 734 162 HOH HOH . H 5 HOH A 135 735 163 HOH HOH . H 5 HOH A 136 736 164 HOH HOH . H 5 HOH A 137 737 165 HOH HOH . H 5 HOH A 138 738 166 HOH HOH . H 5 HOH A 139 739 168 HOH HOH . H 5 HOH A 140 740 169 HOH HOH . H 5 HOH A 141 741 174 HOH HOH . H 5 HOH A 142 742 175 HOH HOH . H 5 HOH A 143 743 178 HOH HOH . H 5 HOH A 144 744 180 HOH HOH . H 5 HOH A 145 745 182 HOH HOH . H 5 HOH A 146 746 183 HOH HOH . H 5 HOH A 147 747 184 HOH HOH . H 5 HOH A 148 748 185 HOH HOH . H 5 HOH A 149 749 187 HOH HOH . H 5 HOH A 150 750 195 HOH HOH . H 5 HOH A 151 751 197 HOH HOH . H 5 HOH A 152 752 198 HOH HOH . H 5 HOH A 153 753 199 HOH HOH . H 5 HOH A 154 754 200 HOH HOH . H 5 HOH A 155 755 201 HOH HOH . H 5 HOH A 156 756 202 HOH HOH . H 5 HOH A 157 757 203 HOH HOH . H 5 HOH A 158 758 204 HOH HOH . H 5 HOH A 159 759 205 HOH HOH . H 5 HOH A 160 760 207 HOH HOH . H 5 HOH A 161 761 208 HOH HOH . H 5 HOH A 162 762 209 HOH HOH . H 5 HOH A 163 763 210 HOH HOH . H 5 HOH A 164 764 211 HOH HOH . H 5 HOH A 165 765 213 HOH HOH . H 5 HOH A 166 766 214 HOH HOH . H 5 HOH A 167 767 215 HOH HOH . H 5 HOH A 168 768 216 HOH HOH . H 5 HOH A 169 769 217 HOH HOH . H 5 HOH A 170 770 219 HOH HOH . H 5 HOH A 171 771 244 HOH HOH . H 5 HOH A 172 772 247 HOH HOH . H 5 HOH A 173 773 250 HOH HOH . H 5 HOH A 174 774 254 HOH HOH . H 5 HOH A 175 775 255 HOH HOH . H 5 HOH A 176 776 259 HOH HOH . H 5 HOH A 177 777 260 HOH HOH . H 5 HOH A 178 778 261 HOH HOH . H 5 HOH A 179 779 262 HOH HOH . H 5 HOH A 180 780 274 HOH HOH . H 5 HOH A 181 781 275 HOH HOH . H 5 HOH A 182 782 276 HOH HOH . H 5 HOH A 183 783 277 HOH HOH . H 5 HOH A 184 784 278 HOH HOH . H 5 HOH A 185 785 279 HOH HOH . H 5 HOH A 186 786 280 HOH HOH . H 5 HOH A 187 787 283 HOH HOH . H 5 HOH A 188 788 284 HOH HOH . H 5 HOH A 189 789 285 HOH HOH . H 5 HOH A 190 790 288 HOH HOH . H 5 HOH A 191 791 289 HOH HOH . H 5 HOH A 192 792 292 HOH HOH . H 5 HOH A 193 793 293 HOH HOH . H 5 HOH A 194 794 294 HOH HOH . H 5 HOH A 195 795 297 HOH HOH . H 5 HOH A 196 796 298 HOH HOH . H 5 HOH A 197 797 301 HOH HOH . H 5 HOH A 198 798 304 HOH HOH . I 5 HOH B 1 601 328 HOH HOH . I 5 HOH B 2 602 315 HOH HOH . I 5 HOH B 3 603 287 HOH HOH . I 5 HOH B 4 604 58 HOH HOH . I 5 HOH B 5 605 83 HOH HOH . I 5 HOH B 6 606 94 HOH HOH . I 5 HOH B 7 607 252 HOH HOH . I 5 HOH B 8 608 3 HOH HOH . I 5 HOH B 9 609 323 HOH HOH . I 5 HOH B 10 610 239 HOH HOH . I 5 HOH B 11 611 316 HOH HOH . I 5 HOH B 12 612 6 HOH HOH . I 5 HOH B 13 613 12 HOH HOH . I 5 HOH B 14 614 15 HOH HOH . I 5 HOH B 15 615 19 HOH HOH . I 5 HOH B 16 616 20 HOH HOH . I 5 HOH B 17 617 25 HOH HOH . I 5 HOH B 18 618 34 HOH HOH . I 5 HOH B 19 619 35 HOH HOH . I 5 HOH B 20 620 50 HOH HOH . I 5 HOH B 21 621 53 HOH HOH . I 5 HOH B 22 622 59 HOH HOH . I 5 HOH B 23 623 60 HOH HOH . I 5 HOH B 24 624 64 HOH HOH . I 5 HOH B 25 625 67 HOH HOH . I 5 HOH B 26 626 74 HOH HOH . I 5 HOH B 27 627 77 HOH HOH . I 5 HOH B 28 628 79 HOH HOH . I 5 HOH B 29 629 81 HOH HOH . I 5 HOH B 30 630 82 HOH HOH . I 5 HOH B 31 631 88 HOH HOH . I 5 HOH B 32 632 91 HOH HOH . I 5 HOH B 33 633 93 HOH HOH . I 5 HOH B 34 634 96 HOH HOH . I 5 HOH B 35 635 100 HOH HOH . I 5 HOH B 36 636 101 HOH HOH . I 5 HOH B 37 637 103 HOH HOH . I 5 HOH B 38 638 105 HOH HOH . I 5 HOH B 39 639 109 HOH HOH . I 5 HOH B 40 640 111 HOH HOH . I 5 HOH B 41 641 114 HOH HOH . I 5 HOH B 42 642 115 HOH HOH . I 5 HOH B 43 643 129 HOH HOH . I 5 HOH B 44 644 134 HOH HOH . I 5 HOH B 45 645 142 HOH HOH . I 5 HOH B 46 646 146 HOH HOH . I 5 HOH B 47 647 148 HOH HOH . I 5 HOH B 48 648 149 HOH HOH . I 5 HOH B 49 649 150 HOH HOH . I 5 HOH B 50 650 153 HOH HOH . I 5 HOH B 51 651 167 HOH HOH . I 5 HOH B 52 652 171 HOH HOH . I 5 HOH B 53 653 172 HOH HOH . I 5 HOH B 54 654 173 HOH HOH . I 5 HOH B 55 655 176 HOH HOH . I 5 HOH B 56 656 177 HOH HOH . I 5 HOH B 57 657 186 HOH HOH . I 5 HOH B 58 658 189 HOH HOH . I 5 HOH B 59 659 190 HOH HOH . I 5 HOH B 60 660 191 HOH HOH . I 5 HOH B 61 661 192 HOH HOH . I 5 HOH B 62 662 193 HOH HOH . I 5 HOH B 63 663 194 HOH HOH . I 5 HOH B 64 664 196 HOH HOH . I 5 HOH B 65 665 221 HOH HOH . I 5 HOH B 66 666 222 HOH HOH . I 5 HOH B 67 667 223 HOH HOH . I 5 HOH B 68 668 224 HOH HOH . I 5 HOH B 69 669 225 HOH HOH . I 5 HOH B 70 670 226 HOH HOH . I 5 HOH B 71 671 227 HOH HOH . I 5 HOH B 72 672 228 HOH HOH . I 5 HOH B 73 673 229 HOH HOH . I 5 HOH B 74 674 230 HOH HOH . I 5 HOH B 75 675 231 HOH HOH . I 5 HOH B 76 676 232 HOH HOH . I 5 HOH B 77 677 233 HOH HOH . I 5 HOH B 78 678 234 HOH HOH . I 5 HOH B 79 679 235 HOH HOH . I 5 HOH B 80 680 236 HOH HOH . I 5 HOH B 81 681 237 HOH HOH . I 5 HOH B 82 682 238 HOH HOH . I 5 HOH B 83 683 240 HOH HOH . I 5 HOH B 84 684 241 HOH HOH . I 5 HOH B 85 685 242 HOH HOH . I 5 HOH B 86 686 243 HOH HOH . I 5 HOH B 87 687 246 HOH HOH . I 5 HOH B 88 688 248 HOH HOH . I 5 HOH B 89 689 249 HOH HOH . I 5 HOH B 90 690 251 HOH HOH . I 5 HOH B 91 691 253 HOH HOH . I 5 HOH B 92 692 257 HOH HOH . I 5 HOH B 93 693 263 HOH HOH . I 5 HOH B 94 694 264 HOH HOH . I 5 HOH B 95 695 265 HOH HOH . I 5 HOH B 96 696 266 HOH HOH . I 5 HOH B 97 697 267 HOH HOH . I 5 HOH B 98 698 268 HOH HOH . I 5 HOH B 99 699 269 HOH HOH . I 5 HOH B 100 700 270 HOH HOH . I 5 HOH B 101 701 271 HOH HOH . I 5 HOH B 102 702 273 HOH HOH . I 5 HOH B 103 703 282 HOH HOH . I 5 HOH B 104 704 286 HOH HOH . I 5 HOH B 105 705 307 HOH HOH . I 5 HOH B 106 706 308 HOH HOH . I 5 HOH B 107 707 309 HOH HOH . I 5 HOH B 108 708 310 HOH HOH . I 5 HOH B 109 709 311 HOH HOH . I 5 HOH B 110 710 312 HOH HOH . I 5 HOH B 111 711 313 HOH HOH . I 5 HOH B 112 712 318 HOH HOH . I 5 HOH B 113 713 319 HOH HOH . I 5 HOH B 114 714 320 HOH HOH . I 5 HOH B 115 715 321 HOH HOH . I 5 HOH B 116 716 322 HOH HOH . I 5 HOH B 117 717 324 HOH HOH . I 5 HOH B 118 718 325 HOH HOH . I 5 HOH B 119 719 326 HOH HOH . I 5 HOH B 120 720 327 HOH HOH . I 5 HOH B 121 721 329 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . G 4 31.605 -1.999 25.256 1 37.12 ? N1 IMD 503 B 1 HETATM 2 C C2 IMD . . . G 4 32.018 -1.612 24.028 1 36.39 ? C2 IMD 503 B 1 HETATM 3 N N3 IMD . . . G 4 33.355 -1.418 24.066 1 36.05 ? N3 IMD 503 B 1 HETATM 4 C C4 IMD . . . G 4 33.783 -1.674 25.321 1 36.34 ? C4 IMD 503 B 1 HETATM 5 C C5 IMD . . . G 4 32.681 -2.037 26.069 1 37.09 ? C5 IMD 503 B 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #