data_4P8T # _model_server_result.job_id jPEUiApf6wplXsmwS1ieRg _model_server_result.datetime_utc '2024-11-25 23:31:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4p8t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":503}' # _entry.id 4P8T # _exptl.entry_id 4P8T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.84 _cell.angle_gamma 90 _cell.entry_id 4P8T _cell.length_a 77.231 _cell.length_b 83.039 _cell.length_c 80.729 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4P8T _symmetry.cell_setting . _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 software_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,I 1 1 B,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 296 n y N1 C5 IMD sing 297 n y N1 HN1 IMD sing 298 n n C2 N3 IMD doub 299 n y C2 H2 IMD sing 300 n n N3 C4 IMD sing 301 n y N3 HN3 IMD sing 302 n n C4 C5 IMD doub 303 n y C4 H4 IMD sing 304 n n C5 H5 IMD sing 305 n n # _atom_sites.entry_id 4P8T _atom_sites.fract_transf_matrix[1][1] 0.012948 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002951 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012043 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012705 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 501 501 FAD FAD . D 3 R26 A 1 502 550 R26 R26 . E 4 IMD A 1 503 560 IMD IMD . F 5 2J3 A 1 504 570 2J3 23B . G 2 FAD B 1 501 501 FAD FAD . H 3 R26 B 1 502 550 R26 R26 . I 6 HOH A 1 601 76 HOH HOH . I 6 HOH A 2 602 98 HOH HOH . I 6 HOH A 3 603 15 HOH HOH . I 6 HOH A 4 604 74 HOH HOH . I 6 HOH A 5 605 30 HOH HOH . I 6 HOH A 6 606 8 HOH HOH . I 6 HOH A 7 607 18 HOH HOH . I 6 HOH A 8 608 25 HOH HOH . I 6 HOH A 9 609 10 HOH HOH . I 6 HOH A 10 610 2 HOH HOH . I 6 HOH A 11 611 1 HOH HOH . I 6 HOH A 12 612 3 HOH HOH . I 6 HOH A 13 613 4 HOH HOH . I 6 HOH A 14 614 9 HOH HOH . I 6 HOH A 15 615 14 HOH HOH . I 6 HOH A 16 616 16 HOH HOH . I 6 HOH A 17 617 17 HOH HOH . I 6 HOH A 18 618 19 HOH HOH . I 6 HOH A 19 619 21 HOH HOH . I 6 HOH A 20 620 22 HOH HOH . I 6 HOH A 21 621 26 HOH HOH . I 6 HOH A 22 622 28 HOH HOH . I 6 HOH A 23 623 29 HOH HOH . I 6 HOH A 24 624 32 HOH HOH . I 6 HOH A 25 625 33 HOH HOH . I 6 HOH A 26 626 35 HOH HOH . I 6 HOH A 27 627 39 HOH HOH . I 6 HOH A 28 628 41 HOH HOH . I 6 HOH A 29 629 42 HOH HOH . I 6 HOH A 30 630 43 HOH HOH . I 6 HOH A 31 631 44 HOH HOH . I 6 HOH A 32 632 45 HOH HOH . I 6 HOH A 33 633 46 HOH HOH . I 6 HOH A 34 634 47 HOH HOH . I 6 HOH A 35 635 48 HOH HOH . I 6 HOH A 36 636 49 HOH HOH . I 6 HOH A 37 637 50 HOH HOH . I 6 HOH A 38 638 51 HOH HOH . I 6 HOH A 39 639 52 HOH HOH . I 6 HOH A 40 640 53 HOH HOH . I 6 HOH A 41 641 54 HOH HOH . I 6 HOH A 42 642 55 HOH HOH . I 6 HOH A 43 643 56 HOH HOH . I 6 HOH A 44 644 57 HOH HOH . I 6 HOH A 45 645 59 HOH HOH . I 6 HOH A 46 646 60 HOH HOH . I 6 HOH A 47 647 61 HOH HOH . I 6 HOH A 48 648 62 HOH HOH . I 6 HOH A 49 649 63 HOH HOH . I 6 HOH A 50 650 64 HOH HOH . I 6 HOH A 51 651 65 HOH HOH . I 6 HOH A 52 652 66 HOH HOH . I 6 HOH A 53 653 67 HOH HOH . I 6 HOH A 54 654 68 HOH HOH . I 6 HOH A 55 655 69 HOH HOH . I 6 HOH A 56 656 70 HOH HOH . I 6 HOH A 57 657 72 HOH HOH . I 6 HOH A 58 658 73 HOH HOH . I 6 HOH A 59 659 75 HOH HOH . I 6 HOH A 60 660 77 HOH HOH . J 6 HOH B 1 601 24 HOH HOH . J 6 HOH B 2 602 31 HOH HOH . J 6 HOH B 3 603 5 HOH HOH . J 6 HOH B 4 604 6 HOH HOH . J 6 HOH B 5 605 7 HOH HOH . J 6 HOH B 6 606 11 HOH HOH . J 6 HOH B 7 607 12 HOH HOH . J 6 HOH B 8 608 13 HOH HOH . J 6 HOH B 9 609 20 HOH HOH . J 6 HOH B 10 610 23 HOH HOH . J 6 HOH B 11 611 27 HOH HOH . J 6 HOH B 12 612 34 HOH HOH . J 6 HOH B 13 613 36 HOH HOH . J 6 HOH B 14 614 37 HOH HOH . J 6 HOH B 15 615 38 HOH HOH . J 6 HOH B 16 616 40 HOH HOH . J 6 HOH B 17 617 78 HOH HOH . J 6 HOH B 18 618 79 HOH HOH . J 6 HOH B 19 619 80 HOH HOH . J 6 HOH B 20 620 81 HOH HOH . J 6 HOH B 21 621 82 HOH HOH . J 6 HOH B 22 622 83 HOH HOH . J 6 HOH B 23 623 84 HOH HOH . J 6 HOH B 24 624 85 HOH HOH . J 6 HOH B 25 625 86 HOH HOH . J 6 HOH B 26 626 87 HOH HOH . J 6 HOH B 27 627 88 HOH HOH . J 6 HOH B 28 628 89 HOH HOH . J 6 HOH B 29 629 90 HOH HOH . J 6 HOH B 30 630 91 HOH HOH . J 6 HOH B 31 631 92 HOH HOH . J 6 HOH B 32 632 93 HOH HOH . J 6 HOH B 33 633 94 HOH HOH . J 6 HOH B 34 634 95 HOH HOH . J 6 HOH B 35 635 96 HOH HOH . J 6 HOH B 36 636 97 HOH HOH . J 6 HOH B 37 637 99 HOH HOH . J 6 HOH B 38 638 100 HOH HOH . J 6 HOH B 39 639 101 HOH HOH . J 6 HOH B 40 640 102 HOH HOH . J 6 HOH B 41 641 103 HOH HOH . J 6 HOH B 42 642 105 HOH HOH . J 6 HOH B 43 643 106 HOH HOH . J 6 HOH B 44 644 107 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . E 4 33.327 -1.306 24.017 1 40.96 ? N1 IMD 503 A 1 HETATM 2 C C2 IMD . . . E 4 31.977 -1.316 24.04 1 40.66 ? C2 IMD 503 A 1 HETATM 3 N N3 IMD . . . E 4 31.578 -1.319 25.33 1 42.64 ? N3 IMD 503 A 1 HETATM 4 C C4 IMD . . . E 4 32.676 -1.302 26.121 1 43.29 ? C4 IMD 503 A 1 HETATM 5 C C5 IMD . . . E 4 33.778 -1.296 25.292 1 42.53 ? C5 IMD 503 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 34 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #