data_4PA7 # _model_server_result.job_id sA_6GDv5mQHTXcWOOyU5Xg _model_server_result.datetime_utc '2025-03-29 01:18:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4pa7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":301}' # _entry.id 4PA7 # _exptl.entry_id 4PA7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 379.489 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEGA-10 _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4PA7 _cell.length_a 79.81 _cell.length_b 328.86 _cell.length_c 79.92 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PA7 _symmetry.cell_setting . _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,K,L,S,T 1 1,2 C,D,M,N,O,P,Q,R,U,V 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_455 -x-1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 -79.81 0 39.96 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N ? 2 M N N ? 2 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 G NA NA . A NA 303 1_555 S O HOH . A HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.029 ? metalc ? metalc2 G NA NA . A NA 303 1_555 S O HOH . A HOH 402 3_455 ? ? ? ? ? ? ? ? ? ? ? ? 3.091 ? # _chem_comp.formula 'C18 H37 N O7' _chem_comp.formula_weight 379.489 _chem_comp.id 2CV _chem_comp.mon_nstd_flag . _chem_comp.name HEGA-10 _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C9 C12 2CV sing 87 n n C9 C1 2CV sing 88 n n C12 C15 2CV sing 89 n n C15 C18 2CV sing 90 n n C18 C21 2CV sing 91 n n C21 C24 2CV sing 92 n n C24 C27 2CV sing 93 n n C27 C30 2CV sing 94 n n C30 N33 2CV sing 95 n n C30 O34 2CV doub 96 n n N33 C35 2CV sing 97 n n N33 C36 2CV sing 98 n n C35 C60 2CV sing 99 n n C36 C37 2CV sing 100 n n C37 C40 2CV sing 101 n n C37 O47 2CV sing 102 n n C40 C41 2CV sing 103 n n C40 O49 2CV sing 104 n n C41 C42 2CV sing 105 n n C41 O51 2CV sing 106 n n C42 C43 2CV sing 107 n n C42 O53 2CV sing 108 n n C43 O44 2CV sing 109 n n C60 O63 2CV sing 110 n n C1 C0 2CV sing 111 n n C9 H91C 2CV sing 112 n n C9 H92C 2CV sing 113 n n C12 H121 2CV sing 114 n n C12 H122 2CV sing 115 n n C1 H11C 2CV sing 116 n n C1 H12C 2CV sing 117 n n C15 H151 2CV sing 118 n n C15 H152 2CV sing 119 n n C18 H181 2CV sing 120 n n C18 H182 2CV sing 121 n n C21 H211 2CV sing 122 n n C21 H212 2CV sing 123 n n C24 H241 2CV sing 124 n n C24 H242 2CV sing 125 n n C27 H271 2CV sing 126 n n C27 H272 2CV sing 127 n n C35 H351 2CV sing 128 n n C35 H352 2CV sing 129 n n C36 H361 2CV sing 130 n n C36 H362 2CV sing 131 n n C60 H601 2CV sing 132 n n C60 H602 2CV sing 133 n n C37 H37 2CV sing 134 n n C40 H40 2CV sing 135 n n O47 H47 2CV sing 136 n n C41 H41 2CV sing 137 n n O49 H49 2CV sing 138 n n C42 H42 2CV sing 139 n n O51 H51 2CV sing 140 n n C43 H431 2CV sing 141 n n C43 H432 2CV sing 142 n n O53 H53 2CV sing 143 n n O44 H44 2CV sing 144 n n O63 H63 2CV sing 145 n n C0 H01C 2CV sing 146 n n C0 H02C 2CV sing 147 n n C0 H03C 2CV sing 148 n n # _atom_sites.entry_id 4PA7 _atom_sites.fract_transf_matrix[1][1] 0.01253 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003041 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012513 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 2CV A 1 301 300 2CV 2CV . F 3 12P A 1 302 350 12P 12P . G 4 NA A 1 303 403 NA NA . H 2 2CV B 1 301 300 2CV 2CV . I 3 12P B 1 302 350 12P 12P . J 4 NA B 1 303 401 NA NA . K 4 NA B 1 304 402 NA NA . L 4 NA B 1 305 404 NA NA . M 2 2CV C 1 301 300 2CV 2CV . N 3 12P C 1 302 350 12P 12P . O 4 NA C 1 303 401 NA NA . P 2 2CV D 1 301 300 2CV 2CV . Q 4 NA D 1 302 402 NA NA . R 4 NA D 1 303 403 NA NA . S 5 HOH A 1 401 1 HOH HOH . S 5 HOH A 2 402 6 HOH HOH . S 5 HOH A 3 403 8 HOH HOH . S 5 HOH A 4 404 10 HOH HOH . S 5 HOH A 5 405 11 HOH HOH . S 5 HOH A 6 406 12 HOH HOH . S 5 HOH A 7 407 21 HOH HOH . T 5 HOH B 1 401 18 HOH HOH . T 5 HOH B 2 402 2 HOH HOH . T 5 HOH B 3 403 3 HOH HOH . T 5 HOH B 4 404 4 HOH HOH . T 5 HOH B 5 405 7 HOH HOH . T 5 HOH B 6 406 9 HOH HOH . T 5 HOH B 7 407 22 HOH HOH . T 5 HOH B 8 408 23 HOH HOH . U 5 HOH C 1 401 19 HOH HOH . U 5 HOH C 2 402 20 HOH HOH . U 5 HOH C 3 403 24 HOH HOH . U 5 HOH C 4 404 25 HOH HOH . U 5 HOH C 5 405 27 HOH HOH . V 5 HOH D 1 401 17 HOH HOH . V 5 HOH D 2 402 26 HOH HOH . V 5 HOH D 3 403 13 HOH HOH . V 5 HOH D 4 404 14 HOH HOH . V 5 HOH D 5 405 15 HOH HOH . V 5 HOH D 6 406 16 HOH HOH . V 5 HOH D 7 407 28 HOH HOH . V 5 HOH D 8 408 29 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C9 2CV . . . M 2 -23.043 -100.732 15.667 1 84.31 ? C9 2CV 301 C 1 HETATM 2 C C12 2CV . . . M 2 -21.709 -100.085 16.032 1 83.86 ? C12 2CV 301 C 1 HETATM 3 C C15 2CV . . . M 2 -21.826 -98.606 16.353 1 82.2 ? C15 2CV 301 C 1 HETATM 4 C C18 2CV . . . M 2 -20.511 -97.903 16.665 1 82.65 ? C18 2CV 301 C 1 HETATM 5 C C21 2CV . . . M 2 -20.695 -96.422 16.943 1 81.23 ? C21 2CV 301 C 1 HETATM 6 C C24 2CV . . . M 2 -19.422 -95.599 16.921 1 81.85 ? C24 2CV 301 C 1 HETATM 7 C C27 2CV . . . M 2 -19.707 -94.11 16.72 1 81.54 ? C27 2CV 301 C 1 HETATM 8 C C30 2CV . . . M 2 -18.488 -93.229 16.881 1 82.63 ? C30 2CV 301 C 1 HETATM 9 N N33 2CV . . . M 2 -18.691 -91.922 17.174 1 79.44 ? N33 2CV 301 C 1 HETATM 10 O O34 2CV . . . M 2 -17.358 -93.69 16.754 1 86.47 ? O34 2CV 301 C 1 HETATM 11 C C35 2CV . . . M 2 -20.032 -91.333 17.381 1 70.83 ? C35 2CV 301 C 1 HETATM 12 C C36 2CV . . . M 2 -17.521 -91.036 17.288 1 83.63 ? C36 2CV 301 C 1 HETATM 13 C C37 2CV . . . M 2 -17.228 -90.503 18.689 1 84.03 ? C37 2CV 301 C 1 HETATM 14 C C40 2CV . . . M 2 -16.08 -89.495 18.689 1 87.91 ? C40 2CV 301 C 1 HETATM 15 O O47 2CV . . . M 2 -16.942 -91.572 19.593 1 81.54 ? O47 2CV 301 C 1 HETATM 16 O O49 2CV . . . M 2 -14.843 -90.184 18.827 1 90.49 ? O49 2CV 301 C 1 HETATM 17 C C60 2CV . . . M 2 -20.5 -90.46 16.237 1 64.91 ? C60 2CV 301 C 1 HETATM 18 O O63 2CV . . . M 2 -21.58 -89.622 16.625 1 58.36 ? O63 2CV 301 C 1 HETATM 19 C C1 2CV . . . M 2 -22.977 -102.221 15.323 1 86.78 ? C1 2CV 301 C 1 HETATM 20 C C0 2CV . . . M 2 -22.516 -102.542 13.913 1 88.91 ? C0 2CV 301 C 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 20 #