data_4PA9 # _model_server_result.job_id Hi7DzT53S5qZNSeYXdXawQ _model_server_result.datetime_utc '2025-03-29 06:24:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4pa9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":300}' # _entry.id 4PA9 # _exptl.entry_id 4PA9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 379.489 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEGA-10 _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4PA9 _cell.length_a 80.32 _cell.length_b 330.55 _cell.length_c 80.25 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PA9 _symmetry.cell_setting . _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,N,O 1 1,2 C,D,J,K,L,M,P,Q 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_455 -x-1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 -80.32 0 40.125 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N ? 2 J N N ? 2 M N N # _chem_comp.formula 'C18 H37 N O7' _chem_comp.formula_weight 379.489 _chem_comp.id 2CV _chem_comp.mon_nstd_flag . _chem_comp.name HEGA-10 _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C9 C12 2CV sing 87 n n C9 C1 2CV sing 88 n n C12 C15 2CV sing 89 n n C15 C18 2CV sing 90 n n C18 C21 2CV sing 91 n n C21 C24 2CV sing 92 n n C24 C27 2CV sing 93 n n C27 C30 2CV sing 94 n n C30 N33 2CV sing 95 n n C30 O34 2CV doub 96 n n N33 C35 2CV sing 97 n n N33 C36 2CV sing 98 n n C35 C60 2CV sing 99 n n C36 C37 2CV sing 100 n n C37 C40 2CV sing 101 n n C37 O47 2CV sing 102 n n C40 C41 2CV sing 103 n n C40 O49 2CV sing 104 n n C41 C42 2CV sing 105 n n C41 O51 2CV sing 106 n n C42 C43 2CV sing 107 n n C42 O53 2CV sing 108 n n C43 O44 2CV sing 109 n n C60 O63 2CV sing 110 n n C1 C0 2CV sing 111 n n C9 H91C 2CV sing 112 n n C9 H92C 2CV sing 113 n n C12 H121 2CV sing 114 n n C12 H122 2CV sing 115 n n C1 H11C 2CV sing 116 n n C1 H12C 2CV sing 117 n n C15 H151 2CV sing 118 n n C15 H152 2CV sing 119 n n C18 H181 2CV sing 120 n n C18 H182 2CV sing 121 n n C21 H211 2CV sing 122 n n C21 H212 2CV sing 123 n n C24 H241 2CV sing 124 n n C24 H242 2CV sing 125 n n C27 H271 2CV sing 126 n n C27 H272 2CV sing 127 n n C35 H351 2CV sing 128 n n C35 H352 2CV sing 129 n n C36 H361 2CV sing 130 n n C36 H362 2CV sing 131 n n C60 H601 2CV sing 132 n n C60 H602 2CV sing 133 n n C37 H37 2CV sing 134 n n C40 H40 2CV sing 135 n n O47 H47 2CV sing 136 n n C41 H41 2CV sing 137 n n O49 H49 2CV sing 138 n n C42 H42 2CV sing 139 n n O51 H51 2CV sing 140 n n C43 H431 2CV sing 141 n n C43 H432 2CV sing 142 n n O53 H53 2CV sing 143 n n O44 H44 2CV sing 144 n n O63 H63 2CV sing 145 n n C0 H01C 2CV sing 146 n n C0 H02C 2CV sing 147 n n C0 H03C 2CV sing 148 n n # _atom_sites.entry_id 4PA9 _atom_sites.fract_transf_matrix[1][1] 0.01245 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003025 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012461 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 2CV A 1 301 300 2CV 2CV . F 3 12P A 1 302 350 12P 12P . G 4 BR B 1 501 501 BR BR . H 2 2CV B 1 502 300 2CV 2CV . I 3 12P B 1 503 350 12P 12P . J 2 2CV C 1 301 300 2CV 2CV . K 3 12P C 1 302 350 12P 12P . L 4 BR C 1 303 501 BR BR . M 2 2CV D 1 300 300 2CV 2CV . N 5 HOH A 1 401 126 HOH HOH . N 5 HOH A 2 402 130 HOH HOH . N 5 HOH A 3 403 131 HOH HOH . N 5 HOH A 4 404 132 HOH HOH . N 5 HOH A 5 405 133 HOH HOH . N 5 HOH A 6 406 138 HOH HOH . N 5 HOH A 7 407 139 HOH HOH . O 5 HOH B 1 601 135 HOH HOH . O 5 HOH B 2 602 127 HOH HOH . O 5 HOH B 3 603 128 HOH HOH . O 5 HOH B 4 604 129 HOH HOH . O 5 HOH B 5 605 134 HOH HOH . O 5 HOH B 6 606 136 HOH HOH . O 5 HOH B 7 607 137 HOH HOH . P 5 HOH C 1 401 141 HOH HOH . P 5 HOH C 2 402 143 HOH HOH . Q 5 HOH D 1 401 142 HOH HOH . Q 5 HOH D 2 402 140 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C9 2CV . . . M 2 -44.591 -100.97 2.524 1 51.95 ? C9 2CV 300 D 1 HETATM 2 C C12 2CV . . . M 2 -44.501 -100.083 1.286 1 52.91 ? C12 2CV 300 D 1 HETATM 3 C C15 2CV . . . M 2 -43.643 -98.832 1.442 1 52.9 ? C15 2CV 300 D 1 HETATM 4 C C18 2CV . . . M 2 -43.551 -97.981 0.184 1 52.89 ? C18 2CV 300 D 1 HETATM 5 C C21 2CV . . . M 2 -43.117 -96.577 0.472 1 55.17 ? C21 2CV 300 D 1 HETATM 6 C C24 2CV . . . M 2 -43.387 -95.599 -0.631 1 59.14 ? C24 2CV 300 D 1 HETATM 7 C C27 2CV . . . M 2 -42.926 -94.198 -0.254 1 63.76 ? C27 2CV 300 D 1 HETATM 8 C C30 2CV . . . M 2 -42.881 -93.239 -1.424 1 68.55 ? C30 2CV 300 D 1 HETATM 9 N N33 2CV . . . M 2 -42.651 -91.934 -1.158 1 70.43 ? N33 2CV 300 D 1 HETATM 10 O O34 2CV . . . M 2 -43.048 -93.637 -2.569 1 70.73 ? O34 2CV 300 D 1 HETATM 11 C C35 2CV . . . M 2 -42.584 -90.974 -2.276 1 67.63 ? C35 2CV 300 D 1 HETATM 12 C C36 2CV . . . M 2 -42.477 -91.396 0.194 1 72.99 ? C36 2CV 300 D 1 HETATM 13 C C37 2CV . . . M 2 -43.817 -90.889 0.718 1 74.65 ? C37 2CV 300 D 1 HETATM 14 C C40 2CV . . . M 2 -43.777 -89.736 1.721 1 78.45 ? C40 2CV 300 D 1 HETATM 15 C C41 2CV . . . M 2 -42.882 -88.568 1.297 1 81.77 ? C41 2CV 300 D 1 HETATM 16 C C42 2CV . . . M 2 -42.916 -87.383 2.266 1 83.24 ? C42 2CV 300 D 1 HETATM 17 C C43 2CV . . . M 2 -41.539 -87.074 2.927 1 83.41 ? C43 2CV 300 D 1 HETATM 18 O O44 2CV . . . M 2 -41.588 -87.02 4.352 1 82.31 ? O44 2CV 300 D 1 HETATM 19 O O47 2CV . . . M 2 -44.524 -91.968 1.326 1 74.01 ? O47 2CV 300 D 1 HETATM 20 O O49 2CV . . . M 2 -43.394 -90.266 2.982 1 80.41 ? O49 2CV 300 D 1 HETATM 21 O O51 2CV . . . M 2 -43.283 -88.102 0.014 1 83.34 ? O51 2CV 300 D 1 HETATM 22 O O53 2CV . . . M 2 -43.971 -87.5 3.224 1 83.07 ? O53 2CV 300 D 1 HETATM 23 C C60 2CV . . . M 2 -41.17 -90.557 -2.61 1 63.3 ? C60 2CV 300 D 1 HETATM 24 O O63 2CV . . . M 2 -40.3 -91.675 -2.704 1 59.58 ? O63 2CV 300 D 1 HETATM 25 C C1 2CV . . . M 2 -45.61 -102.103 2.39 1 50.93 ? C1 2CV 300 D 1 HETATM 26 C C0 2CV . . . M 2 -45.493 -103.204 3.431 1 50.07 ? C0 2CV 300 D 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 26 #