data_4PAY # _model_server_result.job_id FXr4l0CkAJ4FcFBrONIGAA _model_server_result.datetime_utc '2025-03-06 08:09:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4pay # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":702}' # _entry.id 4PAY # _exptl.entry_id 4PAY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 137.327 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BARIUM ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4PAY _cell.length_a 105.46 _cell.length_b 107.584 _cell.length_c 177.538 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PAY _symmetry.cell_setting . _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,K 1 1 B,F,G,H,I,J,L 2 1 A,B,C,D,E,F,G,H,I,J,K,L 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 299 A LEU 297 1_555 A N MSE 300 A MSE 298 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale2 A C MSE 300 A MSE 298 1_555 A N LEU 301 A LEU 299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 A C SER 553 A SER 551 1_555 A N MSE 554 A MSE 552 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C MSE 554 A MSE 552 1_555 A N LEU 555 A LEU 553 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 B C LEU 299 B LEU 297 1_555 B N MSE 300 B MSE 298 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale6 B C MSE 300 B MSE 298 1_555 B N LEU 301 B LEU 299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 B C SER 553 B SER 551 1_555 B N MSE 554 B MSE 552 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale8 B C MSE 554 B MSE 552 1_555 B N LEU 555 B LEU 553 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? metalc ? metalc1 A OE1 GLN 195 A GLN 193 1_555 J BA BA . B BA 705 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 3.11 ? metalc ? metalc2 A O GLN 497 A GLN 495 1_555 E BA BA . A BA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.675 ? metalc ? metalc3 A O GLY 499 A GLY 497 1_555 E BA BA . A BA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.703 ? metalc ? metalc4 A O HIS 601 A HIS 599 1_555 C BA BA . A BA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.469 ? metalc ? metalc5 C BA BA . A BA 701 1_555 K O HOH . A HOH 886 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.304 ? metalc ? metalc6 C BA BA . A BA 701 1_555 K O HOH . A HOH 887 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.345 ? metalc ? metalc7 E BA BA . A BA 703 1_555 K O HOH . A HOH 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.391 ? metalc ? metalc8 E BA BA . A BA 703 1_555 K O HOH . A HOH 815 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.931 ? metalc ? metalc9 E BA BA . A BA 703 1_555 K O HOH . A HOH 889 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.03 ? metalc ? metalc10 K O HOH . A HOH 885 1_555 F BA BA . B BA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.37 ? metalc ? metalc11 B OD1 ASN 304 B ASN 302 1_555 I BA BA . B BA 704 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? metalc ? metalc12 B OD1 ASP 310 B ASP 308 1_555 F BA BA . B BA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.352 ? metalc ? metalc13 B O GLN 497 B GLN 495 1_555 G BA BA . B BA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.644 ? metalc ? metalc14 B O GLY 499 B GLY 497 1_555 G BA BA . B BA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.903 ? metalc ? metalc15 G BA BA . B BA 702 1_555 L O HOH . B HOH 872 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.011 ? metalc ? metalc16 G BA BA . B BA 702 1_555 L O HOH . B HOH 873 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.078 ? metalc ? metalc17 H BA BA . B BA 703 1_555 L O HOH . B HOH 875 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.431 ? # _chem_comp.formula 'Ba 2' _chem_comp.formula_weight 137.327 _chem_comp.id BA _chem_comp.mon_nstd_flag . _chem_comp.name 'BARIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4PAY _atom_sites.fract_transf_matrix[1][1] 0.009482 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009295 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005633 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BA A 1 701 6 BA BA . D 2 BA A 1 702 7 BA BA . E 2 BA A 1 703 8 BA BA . F 2 BA B 1 701 1 BA BA . G 2 BA B 1 702 2 BA BA . H 2 BA B 1 703 3 BA BA . I 2 BA B 1 704 4 BA BA . J 2 BA B 1 705 5 BA BA . K 3 HOH A 1 801 15 HOH HOH . K 3 HOH A 2 802 58 HOH HOH . K 3 HOH A 3 803 101 HOH HOH . K 3 HOH A 4 804 5 HOH HOH . K 3 HOH A 5 805 113 HOH HOH . K 3 HOH A 6 806 165 HOH HOH . K 3 HOH A 7 807 142 HOH HOH . K 3 HOH A 8 808 59 HOH HOH . K 3 HOH A 9 809 3 HOH HOH . K 3 HOH A 10 810 4 HOH HOH . K 3 HOH A 11 811 6 HOH HOH . K 3 HOH A 12 812 7 HOH HOH . K 3 HOH A 13 813 8 HOH HOH . K 3 HOH A 14 814 9 HOH HOH . K 3 HOH A 15 815 16 HOH HOH . K 3 HOH A 16 816 19 HOH HOH . K 3 HOH A 17 817 23 HOH HOH . K 3 HOH A 18 818 26 HOH HOH . K 3 HOH A 19 819 29 HOH HOH . K 3 HOH A 20 820 30 HOH HOH . K 3 HOH A 21 821 32 HOH HOH . K 3 HOH A 22 822 33 HOH HOH . K 3 HOH A 23 823 37 HOH HOH . K 3 HOH A 24 824 39 HOH HOH . K 3 HOH A 25 825 40 HOH HOH . K 3 HOH A 26 826 41 HOH HOH . K 3 HOH A 27 827 42 HOH HOH . K 3 HOH A 28 828 43 HOH HOH . K 3 HOH A 29 829 44 HOH HOH . K 3 HOH A 30 830 45 HOH HOH . K 3 HOH A 31 831 46 HOH HOH . K 3 HOH A 32 832 49 HOH HOH . K 3 HOH A 33 833 56 HOH HOH . K 3 HOH A 34 834 60 HOH HOH . K 3 HOH A 35 835 61 HOH HOH . K 3 HOH A 36 836 62 HOH HOH . K 3 HOH A 37 837 63 HOH HOH . K 3 HOH A 38 838 64 HOH HOH . K 3 HOH A 39 839 65 HOH HOH . K 3 HOH A 40 840 67 HOH HOH . K 3 HOH A 41 841 68 HOH HOH . K 3 HOH A 42 842 69 HOH HOH . K 3 HOH A 43 843 70 HOH HOH . K 3 HOH A 44 844 71 HOH HOH . K 3 HOH A 45 845 74 HOH HOH . K 3 HOH A 46 846 77 HOH HOH . K 3 HOH A 47 847 78 HOH HOH . K 3 HOH A 48 848 79 HOH HOH . K 3 HOH A 49 849 81 HOH HOH . K 3 HOH A 50 850 83 HOH HOH . K 3 HOH A 51 851 84 HOH HOH . K 3 HOH A 52 852 85 HOH HOH . K 3 HOH A 53 853 86 HOH HOH . K 3 HOH A 54 854 88 HOH HOH . K 3 HOH A 55 855 89 HOH HOH . K 3 HOH A 56 856 90 HOH HOH . K 3 HOH A 57 857 91 HOH HOH . K 3 HOH A 58 858 93 HOH HOH . K 3 HOH A 59 859 94 HOH HOH . K 3 HOH A 60 860 95 HOH HOH . K 3 HOH A 61 861 96 HOH HOH . K 3 HOH A 62 862 97 HOH HOH . K 3 HOH A 63 863 98 HOH HOH . K 3 HOH A 64 864 103 HOH HOH . K 3 HOH A 65 865 104 HOH HOH . K 3 HOH A 66 866 106 HOH HOH . K 3 HOH A 67 867 108 HOH HOH . K 3 HOH A 68 868 111 HOH HOH . K 3 HOH A 69 869 115 HOH HOH . K 3 HOH A 70 870 122 HOH HOH . K 3 HOH A 71 871 124 HOH HOH . K 3 HOH A 72 872 125 HOH HOH . K 3 HOH A 73 873 127 HOH HOH . K 3 HOH A 74 874 129 HOH HOH . K 3 HOH A 75 875 134 HOH HOH . K 3 HOH A 76 876 138 HOH HOH . K 3 HOH A 77 877 139 HOH HOH . K 3 HOH A 78 878 140 HOH HOH . K 3 HOH A 79 879 144 HOH HOH . K 3 HOH A 80 880 146 HOH HOH . K 3 HOH A 81 881 147 HOH HOH . K 3 HOH A 82 882 151 HOH HOH . K 3 HOH A 83 883 152 HOH HOH . K 3 HOH A 84 884 153 HOH HOH . K 3 HOH A 85 885 154 HOH HOH . K 3 HOH A 86 886 158 HOH HOH . K 3 HOH A 87 887 159 HOH HOH . K 3 HOH A 88 888 161 HOH HOH . K 3 HOH A 89 889 163 HOH HOH . K 3 HOH A 90 890 164 HOH HOH . K 3 HOH A 91 891 166 HOH HOH . L 3 HOH B 1 801 76 HOH HOH . L 3 HOH B 2 802 36 HOH HOH . L 3 HOH B 3 803 20 HOH HOH . L 3 HOH B 4 804 12 HOH HOH . L 3 HOH B 5 805 119 HOH HOH . L 3 HOH B 6 806 141 HOH HOH . L 3 HOH B 7 807 1 HOH HOH . L 3 HOH B 8 808 2 HOH HOH . L 3 HOH B 9 809 10 HOH HOH . L 3 HOH B 10 810 11 HOH HOH . L 3 HOH B 11 811 13 HOH HOH . L 3 HOH B 12 812 14 HOH HOH . L 3 HOH B 13 813 17 HOH HOH . L 3 HOH B 14 814 18 HOH HOH . L 3 HOH B 15 815 21 HOH HOH . L 3 HOH B 16 816 22 HOH HOH . L 3 HOH B 17 817 24 HOH HOH . L 3 HOH B 18 818 25 HOH HOH . L 3 HOH B 19 819 27 HOH HOH . L 3 HOH B 20 820 28 HOH HOH . L 3 HOH B 21 821 31 HOH HOH . L 3 HOH B 22 822 34 HOH HOH . L 3 HOH B 23 823 35 HOH HOH . L 3 HOH B 24 824 38 HOH HOH . L 3 HOH B 25 825 47 HOH HOH . L 3 HOH B 26 826 48 HOH HOH . L 3 HOH B 27 827 50 HOH HOH . L 3 HOH B 28 828 51 HOH HOH . L 3 HOH B 29 829 52 HOH HOH . L 3 HOH B 30 830 53 HOH HOH . L 3 HOH B 31 831 54 HOH HOH . L 3 HOH B 32 832 55 HOH HOH . L 3 HOH B 33 833 57 HOH HOH . L 3 HOH B 34 834 66 HOH HOH . L 3 HOH B 35 835 72 HOH HOH . L 3 HOH B 36 836 73 HOH HOH . L 3 HOH B 37 837 75 HOH HOH . L 3 HOH B 38 838 80 HOH HOH . L 3 HOH B 39 839 82 HOH HOH . L 3 HOH B 40 840 87 HOH HOH . L 3 HOH B 41 841 92 HOH HOH . L 3 HOH B 42 842 99 HOH HOH . L 3 HOH B 43 843 100 HOH HOH . L 3 HOH B 44 844 102 HOH HOH . L 3 HOH B 45 845 105 HOH HOH . L 3 HOH B 46 846 107 HOH HOH . L 3 HOH B 47 847 109 HOH HOH . L 3 HOH B 48 848 110 HOH HOH . L 3 HOH B 49 849 112 HOH HOH . L 3 HOH B 50 850 114 HOH HOH . L 3 HOH B 51 851 116 HOH HOH . L 3 HOH B 52 852 117 HOH HOH . L 3 HOH B 53 853 118 HOH HOH . L 3 HOH B 54 854 120 HOH HOH . L 3 HOH B 55 855 121 HOH HOH . L 3 HOH B 56 856 123 HOH HOH . L 3 HOH B 57 857 126 HOH HOH . L 3 HOH B 58 858 128 HOH HOH . L 3 HOH B 59 859 130 HOH HOH . L 3 HOH B 60 860 131 HOH HOH . L 3 HOH B 61 861 132 HOH HOH . L 3 HOH B 62 862 133 HOH HOH . L 3 HOH B 63 863 135 HOH HOH . L 3 HOH B 64 864 136 HOH HOH . L 3 HOH B 65 865 137 HOH HOH . L 3 HOH B 66 866 143 HOH HOH . L 3 HOH B 67 867 145 HOH HOH . L 3 HOH B 68 868 148 HOH HOH . L 3 HOH B 69 869 149 HOH HOH . L 3 HOH B 70 870 150 HOH HOH . L 3 HOH B 71 871 155 HOH HOH . L 3 HOH B 72 872 156 HOH HOH . L 3 HOH B 73 873 157 HOH HOH . L 3 HOH B 74 874 160 HOH HOH . L 3 HOH B 75 875 162 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol BA _atom_site.label_atom_id BA _atom_site.label_comp_id BA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 3.752 _atom_site.Cartn_y -8.108 _atom_site.Cartn_z -26.16 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 147.02 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id BA _atom_site.auth_comp_id BA _atom_site.auth_seq_id 702 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #