data_4PC8 # _model_server_result.job_id x6F_88gFAn8c8kLltsv8yg _model_server_result.datetime_utc '2024-12-18 10:04:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4pc8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 4PC8 # _exptl.entry_id 4PC8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 76.051 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'GLYCOLIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4PC8 _cell.length_a 62.62 _cell.length_b 62.62 _cell.length_c 136.01 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PC8 _symmetry.cell_setting . _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H4 O3' _chem_comp.formula_weight 76.051 _chem_comp.id GOA _chem_comp.mon_nstd_flag . _chem_comp.name 'GLYCOLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'HYDROXYACETIC ACID;HYDROXYETHANOIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C CA GOA sing 129 n n C O GOA doub 130 n n C OXT GOA sing 131 n n CA O2 GOA sing 132 n n CA H22 GOA sing 133 n n CA H21 GOA sing 134 n n OXT HXT GOA sing 135 n n O2 H20 GOA sing 136 n n # _atom_sites.entry_id 4PC8 _atom_sites.fract_transf_matrix[1][1] 0.015969 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015969 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007352 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOA A 1 301 1 GOA GOA . C 3 HOH A 1 401 148 HOH HOH . C 3 HOH A 2 402 87 HOH HOH . C 3 HOH A 3 403 28 HOH HOH . C 3 HOH A 4 404 120 HOH HOH . C 3 HOH A 5 405 243 HOH HOH . C 3 HOH A 6 406 199 HOH HOH . C 3 HOH A 7 407 106 HOH HOH . C 3 HOH A 8 408 142 HOH HOH . C 3 HOH A 9 409 194 HOH HOH . C 3 HOH A 10 410 188 HOH HOH . C 3 HOH A 11 411 169 HOH HOH . C 3 HOH A 12 412 77 HOH HOH . C 3 HOH A 13 413 10 HOH HOH . C 3 HOH A 14 414 105 HOH HOH . C 3 HOH A 15 415 121 HOH HOH . C 3 HOH A 16 416 15 HOH HOH . C 3 HOH A 17 417 84 HOH HOH . C 3 HOH A 18 418 101 HOH HOH . C 3 HOH A 19 419 17 HOH HOH . C 3 HOH A 20 420 108 HOH HOH . C 3 HOH A 21 421 74 HOH HOH . C 3 HOH A 22 422 307 HOH HOH . C 3 HOH A 23 423 11 HOH HOH . C 3 HOH A 24 424 6 HOH HOH . C 3 HOH A 25 425 260 HOH HOH . C 3 HOH A 26 426 308 HOH HOH . C 3 HOH A 27 427 236 HOH HOH . C 3 HOH A 28 428 191 HOH HOH . C 3 HOH A 29 429 41 HOH HOH . C 3 HOH A 30 430 210 HOH HOH . C 3 HOH A 31 431 170 HOH HOH . C 3 HOH A 32 432 215 HOH HOH . C 3 HOH A 33 433 12 HOH HOH . C 3 HOH A 34 434 38 HOH HOH . C 3 HOH A 35 435 246 HOH HOH . C 3 HOH A 36 436 202 HOH HOH . C 3 HOH A 37 437 212 HOH HOH . C 3 HOH A 38 438 125 HOH HOH . C 3 HOH A 39 439 44 HOH HOH . C 3 HOH A 40 440 14 HOH HOH . C 3 HOH A 41 441 104 HOH HOH . C 3 HOH A 42 442 117 HOH HOH . C 3 HOH A 43 443 319 HOH HOH . C 3 HOH A 44 444 186 HOH HOH . C 3 HOH A 45 445 126 HOH HOH . C 3 HOH A 46 446 203 HOH HOH . C 3 HOH A 47 447 229 HOH HOH . C 3 HOH A 48 448 141 HOH HOH . C 3 HOH A 49 449 175 HOH HOH . C 3 HOH A 50 450 24 HOH HOH . C 3 HOH A 51 451 25 HOH HOH . C 3 HOH A 52 452 177 HOH HOH . C 3 HOH A 53 453 276 HOH HOH . C 3 HOH A 54 454 178 HOH HOH . C 3 HOH A 55 455 287 HOH HOH . C 3 HOH A 56 456 110 HOH HOH . C 3 HOH A 57 457 159 HOH HOH . C 3 HOH A 58 458 107 HOH HOH . C 3 HOH A 59 459 281 HOH HOH . C 3 HOH A 60 460 58 HOH HOH . C 3 HOH A 61 461 274 HOH HOH . C 3 HOH A 62 462 134 HOH HOH . C 3 HOH A 63 463 218 HOH HOH . C 3 HOH A 64 464 257 HOH HOH . C 3 HOH A 65 465 316 HOH HOH . C 3 HOH A 66 466 91 HOH HOH . C 3 HOH A 67 467 294 HOH HOH . C 3 HOH A 68 468 252 HOH HOH . C 3 HOH A 69 469 221 HOH HOH . C 3 HOH A 70 470 150 HOH HOH . C 3 HOH A 71 471 253 HOH HOH . C 3 HOH A 72 472 324 HOH HOH . C 3 HOH A 73 473 154 HOH HOH . C 3 HOH A 74 474 238 HOH HOH . C 3 HOH A 75 475 280 HOH HOH . C 3 HOH A 76 476 93 HOH HOH . C 3 HOH A 77 477 1 HOH HOH . C 3 HOH A 78 478 2 HOH HOH . C 3 HOH A 79 479 3 HOH HOH . C 3 HOH A 80 480 4 HOH HOH . C 3 HOH A 81 481 5 HOH HOH . C 3 HOH A 82 482 7 HOH HOH . C 3 HOH A 83 483 8 HOH HOH . C 3 HOH A 84 484 9 HOH HOH . C 3 HOH A 85 485 13 HOH HOH . C 3 HOH A 86 486 16 HOH HOH . C 3 HOH A 87 487 18 HOH HOH . C 3 HOH A 88 488 19 HOH HOH . C 3 HOH A 89 489 20 HOH HOH . C 3 HOH A 90 490 21 HOH HOH . C 3 HOH A 91 491 22 HOH HOH . C 3 HOH A 92 492 23 HOH HOH . C 3 HOH A 93 493 26 HOH HOH . C 3 HOH A 94 494 27 HOH HOH . C 3 HOH A 95 495 29 HOH HOH . C 3 HOH A 96 496 30 HOH HOH . C 3 HOH A 97 497 31 HOH HOH . C 3 HOH A 98 498 32 HOH HOH . C 3 HOH A 99 499 33 HOH HOH . C 3 HOH A 100 500 34 HOH HOH . C 3 HOH A 101 501 35 HOH HOH . C 3 HOH A 102 502 36 HOH HOH . C 3 HOH A 103 503 37 HOH HOH . C 3 HOH A 104 504 39 HOH HOH . C 3 HOH A 105 505 40 HOH HOH . C 3 HOH A 106 506 42 HOH HOH . C 3 HOH A 107 507 43 HOH HOH . C 3 HOH A 108 508 45 HOH HOH . C 3 HOH A 109 509 46 HOH HOH . C 3 HOH A 110 510 47 HOH HOH . C 3 HOH A 111 511 48 HOH HOH . C 3 HOH A 112 512 49 HOH HOH . C 3 HOH A 113 513 50 HOH HOH . C 3 HOH A 114 514 51 HOH HOH . C 3 HOH A 115 515 52 HOH HOH . C 3 HOH A 116 516 53 HOH HOH . C 3 HOH A 117 517 54 HOH HOH . C 3 HOH A 118 518 55 HOH HOH . C 3 HOH A 119 519 56 HOH HOH . C 3 HOH A 120 520 57 HOH HOH . C 3 HOH A 121 521 59 HOH HOH . C 3 HOH A 122 522 60 HOH HOH . C 3 HOH A 123 523 61 HOH HOH . C 3 HOH A 124 524 62 HOH HOH . C 3 HOH A 125 525 63 HOH HOH . C 3 HOH A 126 526 64 HOH HOH . C 3 HOH A 127 527 65 HOH HOH . C 3 HOH A 128 528 66 HOH HOH . C 3 HOH A 129 529 67 HOH HOH . C 3 HOH A 130 530 68 HOH HOH . C 3 HOH A 131 531 69 HOH HOH . C 3 HOH A 132 532 70 HOH HOH . C 3 HOH A 133 533 71 HOH HOH . C 3 HOH A 134 534 72 HOH HOH . C 3 HOH A 135 535 73 HOH HOH . C 3 HOH A 136 536 75 HOH HOH . C 3 HOH A 137 537 76 HOH HOH . C 3 HOH A 138 538 78 HOH HOH . C 3 HOH A 139 539 79 HOH HOH . C 3 HOH A 140 540 80 HOH HOH . C 3 HOH A 141 541 81 HOH HOH . C 3 HOH A 142 542 82 HOH HOH . C 3 HOH A 143 543 83 HOH HOH . C 3 HOH A 144 544 85 HOH HOH . C 3 HOH A 145 545 86 HOH HOH . C 3 HOH A 146 546 88 HOH HOH . C 3 HOH A 147 547 89 HOH HOH . C 3 HOH A 148 548 90 HOH HOH . C 3 HOH A 149 549 92 HOH HOH . C 3 HOH A 150 550 94 HOH HOH . C 3 HOH A 151 551 95 HOH HOH . C 3 HOH A 152 552 96 HOH HOH . C 3 HOH A 153 553 97 HOH HOH . C 3 HOH A 154 554 98 HOH HOH . C 3 HOH A 155 555 99 HOH HOH . C 3 HOH A 156 556 100 HOH HOH . C 3 HOH A 157 557 102 HOH HOH . C 3 HOH A 158 558 103 HOH HOH . C 3 HOH A 159 559 109 HOH HOH . C 3 HOH A 160 560 111 HOH HOH . C 3 HOH A 161 561 112 HOH HOH . C 3 HOH A 162 562 113 HOH HOH . C 3 HOH A 163 563 114 HOH HOH . C 3 HOH A 164 564 115 HOH HOH . C 3 HOH A 165 565 116 HOH HOH . C 3 HOH A 166 566 118 HOH HOH . C 3 HOH A 167 567 119 HOH HOH . C 3 HOH A 168 568 122 HOH HOH . C 3 HOH A 169 569 123 HOH HOH . C 3 HOH A 170 570 124 HOH HOH . C 3 HOH A 171 571 127 HOH HOH . C 3 HOH A 172 572 128 HOH HOH . C 3 HOH A 173 573 129 HOH HOH . C 3 HOH A 174 574 130 HOH HOH . C 3 HOH A 175 575 131 HOH HOH . C 3 HOH A 176 576 132 HOH HOH . C 3 HOH A 177 577 133 HOH HOH . C 3 HOH A 178 578 135 HOH HOH . C 3 HOH A 179 579 136 HOH HOH . C 3 HOH A 180 580 137 HOH HOH . C 3 HOH A 181 581 138 HOH HOH . C 3 HOH A 182 582 139 HOH HOH . C 3 HOH A 183 583 140 HOH HOH . C 3 HOH A 184 584 143 HOH HOH . C 3 HOH A 185 585 144 HOH HOH . C 3 HOH A 186 586 145 HOH HOH . C 3 HOH A 187 587 146 HOH HOH . C 3 HOH A 188 588 147 HOH HOH . C 3 HOH A 189 589 149 HOH HOH . C 3 HOH A 190 590 151 HOH HOH . C 3 HOH A 191 591 152 HOH HOH . C 3 HOH A 192 592 153 HOH HOH . C 3 HOH A 193 593 155 HOH HOH . C 3 HOH A 194 594 156 HOH HOH . C 3 HOH A 195 595 157 HOH HOH . C 3 HOH A 196 596 158 HOH HOH . C 3 HOH A 197 597 160 HOH HOH . C 3 HOH A 198 598 161 HOH HOH . C 3 HOH A 199 599 162 HOH HOH . C 3 HOH A 200 600 163 HOH HOH . C 3 HOH A 201 601 164 HOH HOH . C 3 HOH A 202 602 165 HOH HOH . C 3 HOH A 203 603 167 HOH HOH . C 3 HOH A 204 604 168 HOH HOH . C 3 HOH A 205 605 171 HOH HOH . C 3 HOH A 206 606 172 HOH HOH . C 3 HOH A 207 607 173 HOH HOH . C 3 HOH A 208 608 174 HOH HOH . C 3 HOH A 209 609 176 HOH HOH . C 3 HOH A 210 610 179 HOH HOH . C 3 HOH A 211 611 180 HOH HOH . C 3 HOH A 212 612 181 HOH HOH . C 3 HOH A 213 613 182 HOH HOH . C 3 HOH A 214 614 183 HOH HOH . C 3 HOH A 215 615 184 HOH HOH . C 3 HOH A 216 616 185 HOH HOH . C 3 HOH A 217 617 187 HOH HOH . C 3 HOH A 218 618 189 HOH HOH . C 3 HOH A 219 619 190 HOH HOH . C 3 HOH A 220 620 192 HOH HOH . C 3 HOH A 221 621 193 HOH HOH . C 3 HOH A 222 622 195 HOH HOH . C 3 HOH A 223 623 196 HOH HOH . C 3 HOH A 224 624 197 HOH HOH . C 3 HOH A 225 625 198 HOH HOH . C 3 HOH A 226 626 200 HOH HOH . C 3 HOH A 227 627 201 HOH HOH . C 3 HOH A 228 628 204 HOH HOH . C 3 HOH A 229 629 205 HOH HOH . C 3 HOH A 230 630 206 HOH HOH . C 3 HOH A 231 631 207 HOH HOH . C 3 HOH A 232 632 208 HOH HOH . C 3 HOH A 233 633 209 HOH HOH . C 3 HOH A 234 634 211 HOH HOH . C 3 HOH A 235 635 213 HOH HOH . C 3 HOH A 236 636 214 HOH HOH . C 3 HOH A 237 637 216 HOH HOH . C 3 HOH A 238 638 217 HOH HOH . C 3 HOH A 239 639 219 HOH HOH . C 3 HOH A 240 640 220 HOH HOH . C 3 HOH A 241 641 222 HOH HOH . C 3 HOH A 242 642 223 HOH HOH . C 3 HOH A 243 643 224 HOH HOH . C 3 HOH A 244 644 225 HOH HOH . C 3 HOH A 245 645 226 HOH HOH . C 3 HOH A 246 646 227 HOH HOH . C 3 HOH A 247 647 228 HOH HOH . C 3 HOH A 248 648 230 HOH HOH . C 3 HOH A 249 649 231 HOH HOH . C 3 HOH A 250 650 232 HOH HOH . C 3 HOH A 251 651 233 HOH HOH . C 3 HOH A 252 652 234 HOH HOH . C 3 HOH A 253 653 235 HOH HOH . C 3 HOH A 254 654 237 HOH HOH . C 3 HOH A 255 655 240 HOH HOH . C 3 HOH A 256 656 241 HOH HOH . C 3 HOH A 257 657 242 HOH HOH . C 3 HOH A 258 658 244 HOH HOH . C 3 HOH A 259 659 245 HOH HOH . C 3 HOH A 260 660 247 HOH HOH . C 3 HOH A 261 661 248 HOH HOH . C 3 HOH A 262 662 249 HOH HOH . C 3 HOH A 263 663 250 HOH HOH . C 3 HOH A 264 664 251 HOH HOH . C 3 HOH A 265 665 255 HOH HOH . C 3 HOH A 266 666 256 HOH HOH . C 3 HOH A 267 667 258 HOH HOH . C 3 HOH A 268 668 261 HOH HOH . C 3 HOH A 269 669 262 HOH HOH . C 3 HOH A 270 670 263 HOH HOH . C 3 HOH A 271 671 264 HOH HOH . C 3 HOH A 272 672 265 HOH HOH . C 3 HOH A 273 673 266 HOH HOH . C 3 HOH A 274 674 267 HOH HOH . C 3 HOH A 275 675 268 HOH HOH . C 3 HOH A 276 676 269 HOH HOH . C 3 HOH A 277 677 270 HOH HOH . C 3 HOH A 278 678 271 HOH HOH . C 3 HOH A 279 679 272 HOH HOH . C 3 HOH A 280 680 273 HOH HOH . C 3 HOH A 281 681 275 HOH HOH . C 3 HOH A 282 682 277 HOH HOH . C 3 HOH A 283 683 278 HOH HOH . C 3 HOH A 284 684 279 HOH HOH . C 3 HOH A 285 685 282 HOH HOH . C 3 HOH A 286 686 283 HOH HOH . C 3 HOH A 287 687 284 HOH HOH . C 3 HOH A 288 688 285 HOH HOH . C 3 HOH A 289 689 286 HOH HOH . C 3 HOH A 290 690 288 HOH HOH . C 3 HOH A 291 691 289 HOH HOH . C 3 HOH A 292 692 290 HOH HOH . C 3 HOH A 293 693 291 HOH HOH . C 3 HOH A 294 694 292 HOH HOH . C 3 HOH A 295 695 293 HOH HOH . C 3 HOH A 296 696 295 HOH HOH . C 3 HOH A 297 697 296 HOH HOH . C 3 HOH A 298 698 297 HOH HOH . C 3 HOH A 299 699 298 HOH HOH . C 3 HOH A 300 700 299 HOH HOH . C 3 HOH A 301 701 300 HOH HOH . C 3 HOH A 302 702 301 HOH HOH . C 3 HOH A 303 703 302 HOH HOH . C 3 HOH A 304 704 303 HOH HOH . C 3 HOH A 305 705 304 HOH HOH . C 3 HOH A 306 706 305 HOH HOH . C 3 HOH A 307 707 306 HOH HOH . C 3 HOH A 308 708 309 HOH HOH . C 3 HOH A 309 709 310 HOH HOH . C 3 HOH A 310 710 311 HOH HOH . C 3 HOH A 311 711 312 HOH HOH . C 3 HOH A 312 712 313 HOH HOH . C 3 HOH A 313 713 314 HOH HOH . C 3 HOH A 314 714 315 HOH HOH . C 3 HOH A 315 715 317 HOH HOH . C 3 HOH A 316 716 318 HOH HOH . C 3 HOH A 317 717 320 HOH HOH . C 3 HOH A 318 718 321 HOH HOH . C 3 HOH A 319 719 322 HOH HOH . C 3 HOH A 320 720 323 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C GOA . . . B 2 14.83 14.171 50.943 1 37.67 ? C GOA 301 A 1 HETATM 2 C CA GOA . . . B 2 14.349 12.842 50.399 1 43.21 ? CA GOA 301 A 1 HETATM 3 O O GOA . . . B 2 14.983 15.21 50.113 1 40.3 ? O GOA 301 A 1 HETATM 4 O OXT GOA . . . B 2 15.048 14.311 52.134 1 28.95 ? OXT GOA 301 A 1 HETATM 5 O O2 GOA . . . B 2 12.913 12.895 50.322 1 48.95 ? O2 GOA 301 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 5 #