data_4PCB
#
_model_server_result.job_id            FmjOO2-w4M_Pplo_epT42A 
_model_server_result.datetime_utc      '2025-04-08 13:11:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4pcb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":301}' 
#
_entry.id    4PCB 
#
_exptl.entry_id    4PCB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.971 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHATE ION' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4PCB 
_cell.length_a            148.69 
_cell.length_b            148.69 
_cell.length_c            77.81 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4PCB 
_symmetry.cell_setting             . 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 65' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA Dimeric 2 software_defined_assembly 1 
PISA Dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,J,K 1 1 
C,D,G,H,I,L,M 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
hydrog WATSON-CRICK hydrog1 B N1 DG 1 B DG 3 1_555 B N3 DC 14 B DC 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 B N2 DG 1 B DG 3 1_555 B O2 DC 14 B DC 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 B O6 DG 1 B DG 3 1_555 B N4 DC 14 B DC 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 B N3 DC 2 B DC 4 1_555 B N1 DG 13 B DG 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 B N4 DC 2 B DC 4 1_555 B O6 DG 13 B DG 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 B O2 DC 2 B DC 4 1_555 B N2 DG 13 B DG 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog7 B N1 DA 3 B DA 5 1_555 B N3 DT 12 B DT 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog8 B N6 DA 3 B DA 5 1_555 B O4 DT 12 B DT 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog 'DC-DG PAIR' hydrog9 B O2 DC 4 B DC 6 1_555 B N1 DG 11 B DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 B N3 DC 5 B DC 7 1_555 B N1 DG 10 B DG 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog11 B N4 DC 5 B DC 7 1_555 B O6 DG 10 B DG 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 B O2 DC 5 B DC 7 1_555 B N2 DG 10 B DG 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog 'DC-DG PAIR' hydrog13 B N4 DC 20 B DC 22 1_555 B O6 DG 23 B DG 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog14 D N1 DG 1 D DG 3 1_555 D N3 DC 14 D DC 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog15 D N2 DG 1 D DG 3 1_555 D O2 DC 14 D DC 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog16 D O6 DG 1 D DG 3 1_555 D N4 DC 14 D DC 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog17 D N3 DC 2 D DC 4 1_555 D N1 DG 13 D DG 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog18 D N4 DC 2 D DC 4 1_555 D O6 DG 13 D DG 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog19 D O2 DC 2 D DC 4 1_555 D N2 DG 13 D DG 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog 'DA-DT PAIR' hydrog20 D N1 DA 3 D DA 5 1_555 D N3 DT 12 D DT 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog21 D N3 DC 4 D DC 6 1_555 D N1 DG 11 D DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog22 D N4 DC 4 D DC 6 1_555 D O6 DG 11 D DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog23 D O2 DC 4 D DC 6 1_555 D N2 DG 11 D DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog24 D N3 DC 5 D DC 7 1_555 D N1 DG 10 D DG 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog25 D N4 DC 5 D DC 7 1_555 D O6 DG 10 D DG 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog26 D O2 DC 5 D DC 7 1_555 D N2 DG 10 D DG 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog27 D N3 DC 20 D DC 22 1_555 D N1 DG 23 D DG 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog28 D N4 DC 20 D DC 22 1_555 D O6 DG 23 D DG 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog29 D O2 DC 20 D DC 22 1_555 D N2 DG 23 D DG 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'O4 P -3' 
_chem_comp.formula_weight    94.971 
_chem_comp.id                PO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1 PO4 doub 396 n n 
P O2 PO4 sing 397 n n 
P O3 PO4 sing 398 n n 
P O4 PO4 sing 399 n n 
#
_atom_sites.entry_id                     4PCB 
_atom_sites.fract_transf_matrix[1][1]    0.006725 
_atom_sites.fract_transf_matrix[1][2]    0.003883 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007766 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012852 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 PO4 A 1 301 1 PO4 PO4 . 
F 3 PO4 A 1 302 2 PO4 PO4 . 
G 3 PO4 C 1 301 3 PO4 PO4 . 
H 3 PO4 C 1 302 4 PO4 PO4 . 
I 3 PO4 D 1 101 5 PO4 PO4 . 
J 4 HOH A 1 401 94 HOH HOH . 
J 4 HOH A 2 402 97 HOH HOH . 
J 4 HOH A 3 403 39 HOH HOH . 
J 4 HOH A 4 404 89 HOH HOH . 
J 4 HOH A 5 405 1 HOH HOH . 
J 4 HOH A 6 406 8 HOH HOH . 
J 4 HOH A 7 407 10 HOH HOH . 
J 4 HOH A 8 408 21 HOH HOH . 
J 4 HOH A 9 409 23 HOH HOH . 
J 4 HOH A 10 410 24 HOH HOH . 
J 4 HOH A 11 411 31 HOH HOH . 
J 4 HOH A 12 412 46 HOH HOH . 
J 4 HOH A 13 413 55 HOH HOH . 
J 4 HOH A 14 414 58 HOH HOH . 
J 4 HOH A 15 415 60 HOH HOH . 
J 4 HOH A 16 416 62 HOH HOH . 
J 4 HOH A 17 417 72 HOH HOH . 
J 4 HOH A 18 418 78 HOH HOH . 
J 4 HOH A 19 419 80 HOH HOH . 
J 4 HOH A 20 420 86 HOH HOH . 
J 4 HOH A 21 421 100 HOH HOH . 
J 4 HOH A 22 422 103 HOH HOH . 
K 4 HOH B 1 101 7 HOH HOH . 
K 4 HOH B 2 102 18 HOH HOH . 
K 4 HOH B 3 103 27 HOH HOH . 
K 4 HOH B 4 104 28 HOH HOH . 
K 4 HOH B 5 105 37 HOH HOH . 
K 4 HOH B 6 106 50 HOH HOH . 
K 4 HOH B 7 107 109 HOH HOH . 
L 4 HOH C 1 401 75 HOH HOH . 
L 4 HOH C 2 402 53 HOH HOH . 
L 4 HOH C 3 403 82 HOH HOH . 
L 4 HOH C 4 404 96 HOH HOH . 
L 4 HOH C 5 405 106 HOH HOH . 
L 4 HOH C 6 406 30 HOH HOH . 
L 4 HOH C 7 407 105 HOH HOH . 
L 4 HOH C 8 408 49 HOH HOH . 
L 4 HOH C 9 409 107 HOH HOH . 
L 4 HOH C 10 410 29 HOH HOH . 
L 4 HOH C 11 411 88 HOH HOH . 
L 4 HOH C 12 412 2 HOH HOH . 
L 4 HOH C 13 413 3 HOH HOH . 
L 4 HOH C 14 414 4 HOH HOH . 
L 4 HOH C 15 415 11 HOH HOH . 
L 4 HOH C 16 416 12 HOH HOH . 
L 4 HOH C 17 417 13 HOH HOH . 
L 4 HOH C 18 418 14 HOH HOH . 
L 4 HOH C 19 419 17 HOH HOH . 
L 4 HOH C 20 420 19 HOH HOH . 
L 4 HOH C 21 421 20 HOH HOH . 
L 4 HOH C 22 422 22 HOH HOH . 
L 4 HOH C 23 423 25 HOH HOH . 
L 4 HOH C 24 424 26 HOH HOH . 
L 4 HOH C 25 425 33 HOH HOH . 
L 4 HOH C 26 426 35 HOH HOH . 
L 4 HOH C 27 427 36 HOH HOH . 
L 4 HOH C 28 428 38 HOH HOH . 
L 4 HOH C 29 429 48 HOH HOH . 
L 4 HOH C 30 430 52 HOH HOH . 
L 4 HOH C 31 431 57 HOH HOH . 
L 4 HOH C 32 432 74 HOH HOH . 
L 4 HOH C 33 433 77 HOH HOH . 
L 4 HOH C 34 434 87 HOH HOH . 
L 4 HOH C 35 435 90 HOH HOH . 
L 4 HOH C 36 436 91 HOH HOH . 
L 4 HOH C 37 437 92 HOH HOH . 
L 4 HOH C 38 438 93 HOH HOH . 
L 4 HOH C 39 439 98 HOH HOH . 
L 4 HOH C 40 440 99 HOH HOH . 
L 4 HOH C 41 441 101 HOH HOH . 
M 4 HOH D 1 201 6 HOH HOH . 
M 4 HOH D 2 202 9 HOH HOH . 
M 4 HOH D 3 203 32 HOH HOH . 
M 4 HOH D 4 204 54 HOH HOH . 
M 4 HOH D 5 205 61 HOH HOH . 
M 4 HOH D 6 206 95 HOH HOH . 
M 4 HOH D 7 207 102 HOH HOH . 
M 4 HOH D 8 208 104 HOH HOH . 
M 4 HOH D 9 209 108 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P PO4 . . . E 3 61.419 -10.764 -17.284 1 24.17 ? P PO4 301 A 1 
HETATM 2 O O1 PO4 . . . E 3 61.003 -11.038 -18.704 1 23.94 ? O1 PO4 301 A 1 
HETATM 3 O O2 PO4 . . . E 3 62.925 -10.634 -17.183 1 19.31 ? O2 PO4 301 A 1 
HETATM 4 O O3 PO4 . . . E 3 60.893 -11.897 -16.449 1 19.2 ? O3 PO4 301 A 1 
HETATM 5 O O4 PO4 . . . E 3 60.813 -9.458 -16.797 1 33.29 ? O4 PO4 301 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           324 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           5 
#