data_4PFD # _model_server_result.job_id W4KWaFBzSOGORdxT2TKI-w _model_server_result.datetime_utc '2024-10-19 16:32:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4pfd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":503}' # _entry.id 4PFD # _exptl.entry_id 4PFD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 432.417 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[4-(2-methoxyethyl)piperazin-1-yl][6-methyl-7-nitro-5-(trifluoromethyl)-1,3-benzothiazol-2-yl]methanone' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.73 _cell.angle_gamma 90 _cell.entry_id 4PFD _cell.length_a 59.521 _cell.length_b 84.129 _cell.length_c 90.149 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PFD _symmetry.cell_setting . _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 software_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 G N N # _chem_comp.formula 'C17 H19 F3 N4 O4 S' _chem_comp.formula_weight 432.417 _chem_comp.id 2R2 _chem_comp.mon_nstd_flag . _chem_comp.name '[4-(2-methoxyethyl)piperazin-1-yl][6-methyl-7-nitro-5-(trifluoromethyl)-1,3-benzothiazol-2-yl]methanone' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAN CAO 2R2 sing 1 n n CAN NAM 2R2 sing 2 n n OAS CAR 2R2 sing 3 n n OAS CAT 2R2 sing 4 n n CAQ CAR 2R2 sing 5 n n CAQ NAP 2R2 sing 6 n n CAO NAP 2R2 sing 7 n n NAM CAV 2R2 sing 8 n n NAM CAL 2R2 sing 9 n n OAW CAL 2R2 doub 10 n n CAV CAU 2R2 sing 11 n n NAP CAU 2R2 sing 12 n n CAL CAK 2R2 sing 13 n n SAX CAK 2R2 sing 14 n y SAX CAY 2R2 sing 15 n y CAK NAJ 2R2 doub 16 n y OBC NBA 2R2 sing 17 n n NBA OBB 2R2 doub 18 n n NBA CAZ 2R2 sing 19 n n NAJ CAI 2R2 sing 20 n y CAY CAZ 2R2 doub 21 n y CAY CAI 2R2 sing 22 n y CAZ CAB 2R2 sing 23 n y CAI CAH 2R2 doub 24 n y CAB CAC 2R2 doub 25 n y CAB CAA 2R2 sing 26 n n CAH CAC 2R2 sing 27 n y CAC CAD 2R2 sing 28 n n CAD FAG 2R2 sing 29 n n CAD FAF 2R2 sing 30 n n CAD FAE 2R2 sing 31 n n CAH H1 2R2 sing 32 n n CAA H2 2R2 sing 33 n n CAA H3 2R2 sing 34 n n CAA H4 2R2 sing 35 n n CAV H5 2R2 sing 36 n n CAV H6 2R2 sing 37 n n CAU H7 2R2 sing 38 n n CAU H8 2R2 sing 39 n n CAO H10 2R2 sing 40 n n CAO H11 2R2 sing 41 n n CAN H12 2R2 sing 42 n n CAN H13 2R2 sing 43 n n CAQ H14 2R2 sing 44 n n CAQ H15 2R2 sing 45 n n CAR H16 2R2 sing 46 n n CAR H17 2R2 sing 47 n n CAT H18 2R2 sing 48 n n CAT H19 2R2 sing 49 n n CAT H20 2R2 sing 50 n n # _atom_sites.entry_id 4PFD _atom_sites.fract_transf_matrix[1][1] 0.016801 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003184 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011887 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01129 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 501 501 FAD FAD . D 3 IMD A 1 502 570 IMD IMD . E 4 2R2 A 1 503 550 2R2 Z09 . F 2 FAD B 1 501 501 FAD FAD . G 4 2R2 B 1 502 550 2R2 Z09 . H 3 IMD B 1 503 530 IMD IMD . I 5 HOH A 1 601 74 HOH HOH . I 5 HOH A 2 602 65 HOH HOH . I 5 HOH A 3 603 19 HOH HOH . I 5 HOH A 4 604 56 HOH HOH . I 5 HOH A 5 605 49 HOH HOH . I 5 HOH A 6 606 158 HOH HOH . I 5 HOH A 7 607 139 HOH HOH . I 5 HOH A 8 608 129 HOH HOH . I 5 HOH A 9 609 141 HOH HOH . I 5 HOH A 10 610 28 HOH HOH . I 5 HOH A 11 611 72 HOH HOH . I 5 HOH A 12 612 151 HOH HOH . I 5 HOH A 13 613 172 HOH HOH . I 5 HOH A 14 614 91 HOH HOH . I 5 HOH A 15 615 133 HOH HOH . I 5 HOH A 16 616 1 HOH HOH . I 5 HOH A 17 617 2 HOH HOH . I 5 HOH A 18 618 4 HOH HOH . I 5 HOH A 19 619 6 HOH HOH . I 5 HOH A 20 620 8 HOH HOH . I 5 HOH A 21 621 10 HOH HOH . I 5 HOH A 22 622 11 HOH HOH . I 5 HOH A 23 623 12 HOH HOH . I 5 HOH A 24 624 13 HOH HOH . I 5 HOH A 25 625 15 HOH HOH . I 5 HOH A 26 626 16 HOH HOH . I 5 HOH A 27 627 17 HOH HOH . I 5 HOH A 28 628 18 HOH HOH . I 5 HOH A 29 629 22 HOH HOH . I 5 HOH A 30 630 23 HOH HOH . I 5 HOH A 31 631 25 HOH HOH . I 5 HOH A 32 632 27 HOH HOH . I 5 HOH A 33 633 30 HOH HOH . I 5 HOH A 34 634 32 HOH HOH . I 5 HOH A 35 635 34 HOH HOH . I 5 HOH A 36 636 37 HOH HOH . I 5 HOH A 37 637 39 HOH HOH . I 5 HOH A 38 638 45 HOH HOH . I 5 HOH A 39 639 47 HOH HOH . I 5 HOH A 40 640 48 HOH HOH . I 5 HOH A 41 641 50 HOH HOH . I 5 HOH A 42 642 51 HOH HOH . I 5 HOH A 43 643 52 HOH HOH . I 5 HOH A 44 644 54 HOH HOH . I 5 HOH A 45 645 58 HOH HOH . I 5 HOH A 46 646 59 HOH HOH . I 5 HOH A 47 647 60 HOH HOH . I 5 HOH A 48 648 61 HOH HOH . I 5 HOH A 49 649 63 HOH HOH . I 5 HOH A 50 650 64 HOH HOH . I 5 HOH A 51 651 66 HOH HOH . I 5 HOH A 52 652 67 HOH HOH . I 5 HOH A 53 653 68 HOH HOH . I 5 HOH A 54 654 69 HOH HOH . I 5 HOH A 55 655 70 HOH HOH . I 5 HOH A 56 656 71 HOH HOH . I 5 HOH A 57 657 73 HOH HOH . I 5 HOH A 58 658 75 HOH HOH . I 5 HOH A 59 659 76 HOH HOH . I 5 HOH A 60 660 77 HOH HOH . I 5 HOH A 61 661 78 HOH HOH . I 5 HOH A 62 662 79 HOH HOH . I 5 HOH A 63 663 80 HOH HOH . I 5 HOH A 64 664 81 HOH HOH . I 5 HOH A 65 665 82 HOH HOH . I 5 HOH A 66 666 83 HOH HOH . I 5 HOH A 67 667 84 HOH HOH . I 5 HOH A 68 668 85 HOH HOH . I 5 HOH A 69 669 86 HOH HOH . I 5 HOH A 70 670 87 HOH HOH . I 5 HOH A 71 671 88 HOH HOH . I 5 HOH A 72 672 89 HOH HOH . I 5 HOH A 73 673 90 HOH HOH . I 5 HOH A 74 674 126 HOH HOH . I 5 HOH A 75 675 128 HOH HOH . I 5 HOH A 76 676 130 HOH HOH . I 5 HOH A 77 677 131 HOH HOH . I 5 HOH A 78 678 132 HOH HOH . I 5 HOH A 79 679 134 HOH HOH . I 5 HOH A 80 680 135 HOH HOH . I 5 HOH A 81 681 136 HOH HOH . I 5 HOH A 82 682 137 HOH HOH . I 5 HOH A 83 683 138 HOH HOH . I 5 HOH A 84 684 140 HOH HOH . I 5 HOH A 85 685 142 HOH HOH . I 5 HOH A 86 686 143 HOH HOH . I 5 HOH A 87 687 152 HOH HOH . I 5 HOH A 88 688 160 HOH HOH . I 5 HOH A 89 689 161 HOH HOH . I 5 HOH A 90 690 162 HOH HOH . I 5 HOH A 91 691 163 HOH HOH . I 5 HOH A 92 692 164 HOH HOH . I 5 HOH A 93 693 165 HOH HOH . I 5 HOH A 94 694 166 HOH HOH . I 5 HOH A 95 695 167 HOH HOH . I 5 HOH A 96 696 173 HOH HOH . I 5 HOH A 97 697 174 HOH HOH . J 5 HOH B 1 601 98 HOH HOH . J 5 HOH B 2 602 99 HOH HOH . J 5 HOH B 3 603 123 HOH HOH . J 5 HOH B 4 604 127 HOH HOH . J 5 HOH B 5 605 35 HOH HOH . J 5 HOH B 6 606 41 HOH HOH . J 5 HOH B 7 607 150 HOH HOH . J 5 HOH B 8 608 62 HOH HOH . J 5 HOH B 9 609 104 HOH HOH . J 5 HOH B 10 610 101 HOH HOH . J 5 HOH B 11 611 26 HOH HOH . J 5 HOH B 12 612 154 HOH HOH . J 5 HOH B 13 613 121 HOH HOH . J 5 HOH B 14 614 3 HOH HOH . J 5 HOH B 15 615 5 HOH HOH . J 5 HOH B 16 616 7 HOH HOH . J 5 HOH B 17 617 9 HOH HOH . J 5 HOH B 18 618 14 HOH HOH . J 5 HOH B 19 619 20 HOH HOH . J 5 HOH B 20 620 21 HOH HOH . J 5 HOH B 21 621 24 HOH HOH . J 5 HOH B 22 622 29 HOH HOH . J 5 HOH B 23 623 31 HOH HOH . J 5 HOH B 24 624 33 HOH HOH . J 5 HOH B 25 625 36 HOH HOH . J 5 HOH B 26 626 38 HOH HOH . J 5 HOH B 27 627 40 HOH HOH . J 5 HOH B 28 628 42 HOH HOH . J 5 HOH B 29 629 43 HOH HOH . J 5 HOH B 30 630 44 HOH HOH . J 5 HOH B 31 631 46 HOH HOH . J 5 HOH B 32 632 53 HOH HOH . J 5 HOH B 33 633 55 HOH HOH . J 5 HOH B 34 634 57 HOH HOH . J 5 HOH B 35 635 92 HOH HOH . J 5 HOH B 36 636 93 HOH HOH . J 5 HOH B 37 637 94 HOH HOH . J 5 HOH B 38 638 95 HOH HOH . J 5 HOH B 39 639 96 HOH HOH . J 5 HOH B 40 640 97 HOH HOH . J 5 HOH B 41 641 100 HOH HOH . J 5 HOH B 42 642 102 HOH HOH . J 5 HOH B 43 643 103 HOH HOH . J 5 HOH B 44 644 105 HOH HOH . J 5 HOH B 45 645 106 HOH HOH . J 5 HOH B 46 646 107 HOH HOH . J 5 HOH B 47 647 108 HOH HOH . J 5 HOH B 48 648 109 HOH HOH . J 5 HOH B 49 649 110 HOH HOH . J 5 HOH B 50 650 111 HOH HOH . J 5 HOH B 51 651 112 HOH HOH . J 5 HOH B 52 652 113 HOH HOH . J 5 HOH B 53 653 114 HOH HOH . J 5 HOH B 54 654 115 HOH HOH . J 5 HOH B 55 655 116 HOH HOH . J 5 HOH B 56 656 117 HOH HOH . J 5 HOH B 57 657 118 HOH HOH . J 5 HOH B 58 658 119 HOH HOH . J 5 HOH B 59 659 120 HOH HOH . J 5 HOH B 60 660 122 HOH HOH . J 5 HOH B 61 661 124 HOH HOH . J 5 HOH B 62 662 125 HOH HOH . J 5 HOH B 63 663 144 HOH HOH . J 5 HOH B 64 664 145 HOH HOH . J 5 HOH B 65 665 146 HOH HOH . J 5 HOH B 66 666 147 HOH HOH . J 5 HOH B 67 667 148 HOH HOH . J 5 HOH B 68 668 149 HOH HOH . J 5 HOH B 69 669 153 HOH HOH . J 5 HOH B 70 670 155 HOH HOH . J 5 HOH B 71 671 156 HOH HOH . J 5 HOH B 72 672 157 HOH HOH . J 5 HOH B 73 673 159 HOH HOH . J 5 HOH B 74 674 168 HOH HOH . J 5 HOH B 75 675 169 HOH HOH . J 5 HOH B 76 676 170 HOH HOH . J 5 HOH B 77 677 171 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F FAF 2R2 . . . E 4 11.219 -22.105 13.786 0.9 46.94 ? FAF 2R2 503 A 1 HETATM 2 C CAD 2R2 . . . E 4 10.389 -21.139 13.442 0.9 46.62 ? CAD 2R2 503 A 1 HETATM 3 F FAG 2R2 . . . E 4 9.16 -21.531 13.725 0.9 47.11 ? FAG 2R2 503 A 1 HETATM 4 F FAE 2R2 . . . E 4 10.692 -20.057 14.137 0.9 46.77 ? FAE 2R2 503 A 1 HETATM 5 C CAC 2R2 . . . E 4 10.523 -20.845 11.969 0.9 46.18 ? CAC 2R2 503 A 1 HETATM 6 C CAH 2R2 . . . E 4 11.557 -21.482 11.279 0.9 45.57 ? CAH 2R2 503 A 1 HETATM 7 C CAB 2R2 . . . E 4 9.59 -19.904 11.259 0.9 45.84 ? CAB 2R2 503 A 1 HETATM 8 C CAA 2R2 . . . E 4 8.473 -19.216 12.011 0.9 45.38 ? CAA 2R2 503 A 1 HETATM 9 C CAZ 2R2 . . . E 4 9.785 -19.655 9.794 0.9 45.72 ? CAZ 2R2 503 A 1 HETATM 10 N NBA 2R2 . . . E 4 8.951 -18.79 9.054 0.9 46.02 ? NBA 2R2 503 A 1 HETATM 11 O OBB 2R2 . . . E 4 7.792 -18.587 9.4 0.9 45.65 ? OBB 2R2 503 A 1 HETATM 12 O OBC 2R2 . . . E 4 9.369 -18.229 8.047 0.9 46.21 ? OBC 2R2 503 A 1 HETATM 13 C CAY 2R2 . . . E 4 10.915 -20.384 9.144 0.9 45.58 ? CAY 2R2 503 A 1 HETATM 14 C CAI 2R2 . . . E 4 11.794 -21.299 9.921 0.9 45.58 ? CAI 2R2 503 A 1 HETATM 15 N NAJ 2R2 . . . E 4 12.75 -21.835 9.098 0.9 45.77 ? NAJ 2R2 503 A 1 HETATM 16 S SAX 2R2 . . . E 4 11.373 -20.306 7.535 0.9 45.45 ? SAX 2R2 503 A 1 HETATM 17 C CAK 2R2 . . . E 4 12.677 -21.423 7.8 0.9 45.9 ? CAK 2R2 503 A 1 HETATM 18 C CAL 2R2 . . . E 4 13.504 -21.749 6.602 0.9 46.23 ? CAL 2R2 503 A 1 HETATM 19 O OAW 2R2 . . . E 4 14.217 -20.871 6.147 0.9 45.62 ? OAW 2R2 503 A 1 HETATM 20 N NAM 2R2 . . . E 4 13.468 -22.976 6.075 0.9 46.79 ? NAM 2R2 503 A 1 HETATM 21 C CAV 2R2 . . . E 4 12.385 -23.921 6.307 0.9 46.84 ? CAV 2R2 503 A 1 HETATM 22 C CAU 2R2 . . . E 4 13.011 -25.02 7.167 0.9 47.58 ? CAU 2R2 503 A 1 HETATM 23 N NAP 2R2 . . . E 4 14.252 -25.601 6.586 0.9 48.02 ? NAP 2R2 503 A 1 HETATM 24 C CAO 2R2 . . . E 4 15.197 -24.603 6.023 0.9 47.23 ? CAO 2R2 503 A 1 HETATM 25 C CAN 2R2 . . . E 4 14.522 -23.494 5.214 0.9 46.84 ? CAN 2R2 503 A 1 HETATM 26 C CAQ 2R2 . . . E 4 13.939 -26.651 5.591 0.9 48.77 ? CAQ 2R2 503 A 1 HETATM 27 C CAR 2R2 . . . E 4 14.342 -28.006 6.162 0.9 49.49 ? CAR 2R2 503 A 1 HETATM 28 O OAS 2R2 . . . E 4 15.399 -28.564 5.383 0.9 50.62 ? OAS 2R2 503 A 1 HETATM 29 C CAT 2R2 . . . E 4 16.246 -29.404 6.165 0.9 50.52 ? CAT 2R2 503 A 1 # _model_server_stats.io_time_ms 79 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 29 #