data_4PGK # _model_server_result.job_id LdfWX-UkGW5sLeVjM68Zrg _model_server_result.datetime_utc '2024-10-21 04:49:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4pgk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 4PGK # _exptl.entry_id 4PGK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (III) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4PGK _cell.length_a 77.34 _cell.length_b 77.34 _cell.length_c 116.96 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PGK _symmetry.cell_setting . _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 46 A GLU 45 1_555 B FE FE . A FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc2 A OE2 GLU 46 A GLU 45 1_555 B FE FE . A FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? metalc ? metalc3 A OH TYR 53 A TYR 52 1_555 C FE FE . A FE 302 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.783 ? metalc ? metalc4 A OE1 GLU 74 A GLU 73 1_555 B FE FE . A FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc5 A OE2 GLU 74 A GLU 73 1_555 C FE FE . A FE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc6 A OE1 GLU 129 A GLU 128 1_555 C FE FE . A FE 302 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc7 A OE2 GLU 129 A GLU 128 1_555 C FE FE . A FE 302 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc8 A OE2 GLU 158 A GLU 157 1_555 B FE FE . A FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc9 A ND1 HIS 161 A HIS 160 1_555 C FE FE . A FE 302 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc10 C FE FE . A FE 302 1_555 D OAB Y69 . A Y69 303 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.989 ? metalc ? metalc11 C FE FE . A FE 302 1_555 D OAB Y69 . A Y69 303 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.504 ? # _chem_comp.formula 'Fe 3' _chem_comp.formula_weight 55.845 _chem_comp.id FE _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4PGK _atom_sites.fract_transf_matrix[1][1] 0.01293 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01293 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00855 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE A 1 301 1 FE FE . C 2 FE A 1 302 2 FE FE . D 3 Y69 A 1 303 1 Y69 Y69 . E 4 HOH A 1 401 5 HOH HOH . E 4 HOH A 2 402 66 HOH HOH . E 4 HOH A 3 403 16 HOH HOH . E 4 HOH A 4 404 3 HOH HOH . E 4 HOH A 5 405 4 HOH HOH . E 4 HOH A 6 406 25 HOH HOH . E 4 HOH A 7 407 32 HOH HOH . E 4 HOH A 8 408 17 HOH HOH . E 4 HOH A 9 409 70 HOH HOH . E 4 HOH A 10 410 61 HOH HOH . E 4 HOH A 11 411 13 HOH HOH . E 4 HOH A 12 412 53 HOH HOH . E 4 HOH A 13 413 22 HOH HOH . E 4 HOH A 14 414 54 HOH HOH . E 4 HOH A 15 415 28 HOH HOH . E 4 HOH A 16 416 15 HOH HOH . E 4 HOH A 17 417 86 HOH HOH . E 4 HOH A 18 418 71 HOH HOH . E 4 HOH A 19 419 10 HOH HOH . E 4 HOH A 20 420 80 HOH HOH . E 4 HOH A 21 421 26 HOH HOH . E 4 HOH A 22 422 62 HOH HOH . E 4 HOH A 23 423 52 HOH HOH . E 4 HOH A 24 424 56 HOH HOH . E 4 HOH A 25 425 33 HOH HOH . E 4 HOH A 26 426 45 HOH HOH . E 4 HOH A 27 427 57 HOH HOH . E 4 HOH A 28 428 48 HOH HOH . E 4 HOH A 29 429 1 HOH HOH . E 4 HOH A 30 430 2 HOH HOH . E 4 HOH A 31 431 6 HOH HOH . E 4 HOH A 32 432 7 HOH HOH . E 4 HOH A 33 433 8 HOH HOH . E 4 HOH A 34 434 9 HOH HOH . E 4 HOH A 35 435 11 HOH HOH . E 4 HOH A 36 436 12 HOH HOH . E 4 HOH A 37 437 14 HOH HOH . E 4 HOH A 38 438 18 HOH HOH . E 4 HOH A 39 439 19 HOH HOH . E 4 HOH A 40 440 20 HOH HOH . E 4 HOH A 41 441 21 HOH HOH . E 4 HOH A 42 442 23 HOH HOH . E 4 HOH A 43 443 24 HOH HOH . E 4 HOH A 44 444 27 HOH HOH . E 4 HOH A 45 445 29 HOH HOH . E 4 HOH A 46 446 30 HOH HOH . E 4 HOH A 47 447 31 HOH HOH . E 4 HOH A 48 448 34 HOH HOH . E 4 HOH A 49 449 35 HOH HOH . E 4 HOH A 50 450 36 HOH HOH . E 4 HOH A 51 451 37 HOH HOH . E 4 HOH A 52 452 38 HOH HOH . E 4 HOH A 53 453 39 HOH HOH . E 4 HOH A 54 454 40 HOH HOH . E 4 HOH A 55 455 41 HOH HOH . E 4 HOH A 56 456 42 HOH HOH . E 4 HOH A 57 457 43 HOH HOH . E 4 HOH A 58 458 44 HOH HOH . E 4 HOH A 59 459 46 HOH HOH . E 4 HOH A 60 460 47 HOH HOH . E 4 HOH A 61 461 49 HOH HOH . E 4 HOH A 62 462 50 HOH HOH . E 4 HOH A 63 463 51 HOH HOH . E 4 HOH A 64 464 55 HOH HOH . E 4 HOH A 65 465 58 HOH HOH . E 4 HOH A 66 466 59 HOH HOH . E 4 HOH A 67 467 60 HOH HOH . E 4 HOH A 68 468 63 HOH HOH . E 4 HOH A 69 469 64 HOH HOH . E 4 HOH A 70 470 65 HOH HOH . E 4 HOH A 71 471 67 HOH HOH . E 4 HOH A 72 472 68 HOH HOH . E 4 HOH A 73 473 69 HOH HOH . E 4 HOH A 74 474 72 HOH HOH . E 4 HOH A 75 475 73 HOH HOH . E 4 HOH A 76 476 74 HOH HOH . E 4 HOH A 77 477 75 HOH HOH . E 4 HOH A 78 478 76 HOH HOH . E 4 HOH A 79 479 77 HOH HOH . E 4 HOH A 80 480 78 HOH HOH . E 4 HOH A 81 481 79 HOH HOH . E 4 HOH A 82 482 81 HOH HOH . E 4 HOH A 83 483 82 HOH HOH . E 4 HOH A 84 484 83 HOH HOH . E 4 HOH A 85 485 84 HOH HOH . E 4 HOH A 86 486 85 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -20.896 _atom_site.Cartn_y 8.128 _atom_site.Cartn_z -11.905 _atom_site.occupancy 0.49 _atom_site.B_iso_or_equiv 30.23 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #