data_4PH3 # _model_server_result.job_id Kz5Dcm2wYHdytbuQfJeRUA _model_server_result.datetime_utc '2024-12-26 10:16:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ph3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":216}' # _entry.id 4PH3 # _exptl.entry_id 4PH3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 49 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4PH3 _cell.length_a 65.613 _cell.length_b 66.242 _cell.length_c 81.355 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PH3 _symmetry.cell_setting . _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,AB 1 1 B,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,BB 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 V N N ? 2 W N N ? 2 X N N ? 2 Y N N ? 2 Z N N ? 2 AA N N ? 2 BA N N ? 2 CA N N ? 2 DA N N ? 2 EA N N ? 2 FA N N ? 2 GA N N ? 2 IA N N ? 2 JA N N ? 2 KA N N ? 2 LA N N ? 2 MA N N ? 2 NA N N ? 2 OA N N ? 2 PA N N ? 2 QA N N ? 2 RA N N ? 2 SA N N ? 2 TA N N ? 2 UA N N ? 2 VA N N ? 2 WA N N ? 2 XA N N ? 2 YA N N ? 2 ZA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 58 A LEU 57 1_555 A N CSO 59 A CSO 58 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.342 ? covale ? covale2 A C LEU 58 A LEU 57 1_555 A N CSO 59 A CSO 58 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.347 ? covale ? covale3 A C CSO 59 A CSO 58 1_555 A N GLN 60 A GLN 59 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.349 ? covale ? covale4 A C CSO 59 A CSO 58 1_555 A N GLN 60 A GLN 59 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.352 ? covale ? covale5 B C LEU 58 B LEU 57 1_555 B N CSO 59 B CSO 58 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.343 ? covale ? covale6 B C LEU 58 B LEU 57 1_555 B N CSO 59 B CSO 58 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.348 ? covale ? covale7 B C CSO 59 B CSO 58 1_555 B N GLN 60 B GLN 59 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.352 ? covale ? covale8 B C CSO 59 B CSO 58 1_555 B N GLN 60 B GLN 59 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.356 ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4PH3 _atom_sites.fract_transf_matrix[1][1] 0.015241 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015096 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012292 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 IOD A 1 201 1 IOD IOD . D 2 IOD A 1 202 2 IOD IOD . E 2 IOD A 1 203 5 IOD IOD . F 2 IOD A 1 204 6 IOD IOD . G 2 IOD A 1 205 8 IOD IOD . H 2 IOD A 1 206 9 IOD IOD . I 2 IOD A 1 207 10 IOD IOD . J 2 IOD A 1 208 16 IOD IOD . K 2 IOD A 1 209 17 IOD IOD . L 2 IOD A 1 210 18 IOD IOD . M 2 IOD A 1 211 19 IOD IOD . N 2 IOD A 1 212 20 IOD IOD . O 2 IOD A 1 213 23 IOD IOD . P 2 IOD A 1 214 26 IOD IOD . Q 2 IOD A 1 215 30 IOD IOD . R 2 IOD A 1 216 31 IOD IOD . S 2 IOD A 1 217 32 IOD IOD . T 2 IOD A 1 218 33 IOD IOD . U 2 IOD A 1 219 35 IOD IOD . V 2 IOD A 1 220 37 IOD IOD . W 2 IOD A 1 221 38 IOD IOD . X 2 IOD A 1 222 39 IOD IOD . Y 2 IOD A 1 223 40 IOD IOD . Z 2 IOD A 1 224 42 IOD IOD . AA 2 IOD A 1 225 43 IOD IOD . BA 2 IOD A 1 226 44 IOD IOD . CA 2 IOD A 1 227 45 IOD IOD . DA 2 IOD A 1 228 46 IOD IOD . EA 2 IOD A 1 229 47 IOD IOD . FA 2 IOD A 1 230 48 IOD IOD . GA 2 IOD A 1 231 49 IOD IOD . HA 3 GOL A 1 232 1 GOL GOL . IA 2 IOD B 1 201 3 IOD IOD . JA 2 IOD B 1 202 4 IOD IOD . KA 2 IOD B 1 203 7 IOD IOD . LA 2 IOD B 1 204 11 IOD IOD . MA 2 IOD B 1 205 12 IOD IOD . NA 2 IOD B 1 206 13 IOD IOD . OA 2 IOD B 1 207 14 IOD IOD . PA 2 IOD B 1 208 15 IOD IOD . QA 2 IOD B 1 209 21 IOD IOD . RA 2 IOD B 1 210 22 IOD IOD . SA 2 IOD B 1 211 24 IOD IOD . TA 2 IOD B 1 212 25 IOD IOD . UA 2 IOD B 1 213 27 IOD IOD . VA 2 IOD B 1 214 28 IOD IOD . WA 2 IOD B 1 215 29 IOD IOD . XA 2 IOD B 1 216 34 IOD IOD . YA 2 IOD B 1 217 36 IOD IOD . ZA 2 IOD B 1 218 41 IOD IOD . AB 4 HOH A 1 301 12 HOH HOH . AB 4 HOH A 2 302 27 HOH HOH . AB 4 HOH A 3 303 25 HOH HOH . AB 4 HOH A 4 304 54 HOH HOH . AB 4 HOH A 5 305 29 HOH HOH . AB 4 HOH A 6 306 74 HOH HOH . AB 4 HOH A 7 307 1 HOH HOH . AB 4 HOH A 8 308 3 HOH HOH . AB 4 HOH A 9 309 5 HOH HOH . AB 4 HOH A 10 310 8 HOH HOH . AB 4 HOH A 11 311 9 HOH HOH . AB 4 HOH A 12 312 11 HOH HOH . AB 4 HOH A 13 313 21 HOH HOH . AB 4 HOH A 14 314 24 HOH HOH . AB 4 HOH A 15 315 28 HOH HOH . AB 4 HOH A 16 316 32 HOH HOH . AB 4 HOH A 17 317 33 HOH HOH . AB 4 HOH A 18 318 34 HOH HOH . AB 4 HOH A 19 319 35 HOH HOH . AB 4 HOH A 20 320 36 HOH HOH . AB 4 HOH A 21 321 37 HOH HOH . AB 4 HOH A 22 322 40 HOH HOH . AB 4 HOH A 23 323 41 HOH HOH . AB 4 HOH A 24 324 51 HOH HOH . AB 4 HOH A 25 325 56 HOH HOH . AB 4 HOH A 26 326 57 HOH HOH . AB 4 HOH A 27 327 58 HOH HOH . AB 4 HOH A 28 328 60 HOH HOH . AB 4 HOH A 29 329 61 HOH HOH . AB 4 HOH A 30 330 62 HOH HOH . AB 4 HOH A 31 331 63 HOH HOH . AB 4 HOH A 32 332 64 HOH HOH . AB 4 HOH A 33 333 65 HOH HOH . AB 4 HOH A 34 334 69 HOH HOH . AB 4 HOH A 35 335 72 HOH HOH . AB 4 HOH A 36 336 73 HOH HOH . AB 4 HOH A 37 337 79 HOH HOH . AB 4 HOH A 38 338 81 HOH HOH . BB 4 HOH B 1 301 15 HOH HOH . BB 4 HOH B 2 302 70 HOH HOH . BB 4 HOH B 3 303 39 HOH HOH . BB 4 HOH B 4 304 2 HOH HOH . BB 4 HOH B 5 305 22 HOH HOH . BB 4 HOH B 6 306 26 HOH HOH . BB 4 HOH B 7 307 68 HOH HOH . BB 4 HOH B 8 308 16 HOH HOH . BB 4 HOH B 9 309 53 HOH HOH . BB 4 HOH B 10 310 50 HOH HOH . BB 4 HOH B 11 311 4 HOH HOH . BB 4 HOH B 12 312 6 HOH HOH . BB 4 HOH B 13 313 7 HOH HOH . BB 4 HOH B 14 314 10 HOH HOH . BB 4 HOH B 15 315 13 HOH HOH . BB 4 HOH B 16 316 14 HOH HOH . BB 4 HOH B 17 317 17 HOH HOH . BB 4 HOH B 18 318 18 HOH HOH . BB 4 HOH B 19 319 19 HOH HOH . BB 4 HOH B 20 320 20 HOH HOH . BB 4 HOH B 21 321 23 HOH HOH . BB 4 HOH B 22 322 30 HOH HOH . BB 4 HOH B 23 323 31 HOH HOH . BB 4 HOH B 24 324 38 HOH HOH . BB 4 HOH B 25 325 42 HOH HOH . BB 4 HOH B 26 326 43 HOH HOH . BB 4 HOH B 27 327 44 HOH HOH . BB 4 HOH B 28 328 45 HOH HOH . BB 4 HOH B 29 329 46 HOH HOH . BB 4 HOH B 30 330 47 HOH HOH . BB 4 HOH B 31 331 48 HOH HOH . BB 4 HOH B 32 332 49 HOH HOH . BB 4 HOH B 33 333 52 HOH HOH . BB 4 HOH B 34 334 55 HOH HOH . BB 4 HOH B 35 335 59 HOH HOH . BB 4 HOH B 36 336 66 HOH HOH . BB 4 HOH B 37 337 67 HOH HOH . BB 4 HOH B 38 338 71 HOH HOH . BB 4 HOH B 39 339 75 HOH HOH . BB 4 HOH B 40 340 76 HOH HOH . BB 4 HOH B 41 341 77 HOH HOH . BB 4 HOH B 42 342 78 HOH HOH . BB 4 HOH B 43 343 80 HOH HOH . BB 4 HOH B 44 344 82 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id R _atom_site.label_entity_id 2 _atom_site.Cartn_x 33.795 _atom_site.Cartn_y 37.919 _atom_site.Cartn_z -0.18 _atom_site.occupancy 0.36 _atom_site.B_iso_or_equiv 58.26 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 216 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 392 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #