data_4PHF
#
_model_server_result.job_id            0KykXOvCsREUDO4GQbjP_Q 
_model_server_result.datetime_utc      '2024-11-29 00:44:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4phf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":203}' 
#
_entry.id    4PHF 
#
_exptl.entry_id    4PHF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.005 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NITRATE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4PHF 
_cell.length_a            49.31 
_cell.length_b            54.9 
_cell.length_c            60.47 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4PHF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 37 A CYS 35 1_555 B CAA 2UH . A 2UH 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.635 ? 
metalc ? metalc1 A OG1 THR 24 A THR 22 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.955 ? 
metalc ? metalc2 B O3B 2UH . A 2UH 201 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? 
metalc ? metalc3 C MG MG . A MG 202 1_555 E O HOH . A HOH 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? 
metalc ? metalc4 C MG MG . A MG 202 1_555 E O HOH . A HOH 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? 
metalc ? metalc5 C MG MG . A MG 202 1_555 E O HOH . A HOH 327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? 
metalc ? metalc6 C MG MG . A MG 202 1_555 E O HOH . A HOH 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
#
_chem_comp.formula           'N O3 -1' 
_chem_comp.formula_weight    62.005 
_chem_comp.id                NO3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NITRATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N O1 NO3 doub 301 n n 
N O2 NO3 sing 302 n n 
N O3 NO3 sing 303 n n 
#
_atom_sites.entry_id                     4PHF 
_atom_sites.fract_transf_matrix[1][1]    0.02028 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018215 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016537 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 2UH A 1 201 400 2UH aGD . 
C 3 MG A 1 202 500 MG MG . 
D 4 NO3 A 1 203 1 NO3 NO3 . 
E 5 HOH A 1 301 53 HOH HOH . 
E 5 HOH A 2 302 11 HOH HOH . 
E 5 HOH A 3 303 6 HOH HOH . 
E 5 HOH A 4 304 35 HOH HOH . 
E 5 HOH A 5 305 13 HOH HOH . 
E 5 HOH A 6 306 26 HOH HOH . 
E 5 HOH A 7 307 22 HOH HOH . 
E 5 HOH A 8 308 25 HOH HOH . 
E 5 HOH A 9 309 58 HOH HOH . 
E 5 HOH A 10 310 7 HOH HOH . 
E 5 HOH A 11 311 56 HOH HOH . 
E 5 HOH A 12 312 12 HOH HOH . 
E 5 HOH A 13 313 29 HOH HOH . 
E 5 HOH A 14 314 44 HOH HOH . 
E 5 HOH A 15 315 55 HOH HOH . 
E 5 HOH A 16 316 38 HOH HOH . 
E 5 HOH A 17 317 40 HOH HOH . 
E 5 HOH A 18 318 9 HOH HOH . 
E 5 HOH A 19 319 16 HOH HOH . 
E 5 HOH A 20 320 61 HOH HOH . 
E 5 HOH A 21 321 10 HOH HOH . 
E 5 HOH A 22 322 48 HOH HOH . 
E 5 HOH A 23 323 54 HOH HOH . 
E 5 HOH A 24 324 47 HOH HOH . 
E 5 HOH A 25 325 1 HOH HOH . 
E 5 HOH A 26 326 2 HOH HOH . 
E 5 HOH A 27 327 3 HOH HOH . 
E 5 HOH A 28 328 4 HOH HOH . 
E 5 HOH A 29 329 5 HOH HOH . 
E 5 HOH A 30 330 8 HOH HOH . 
E 5 HOH A 31 331 14 HOH HOH . 
E 5 HOH A 32 332 15 HOH HOH . 
E 5 HOH A 33 333 17 HOH HOH . 
E 5 HOH A 34 334 18 HOH HOH . 
E 5 HOH A 35 335 19 HOH HOH . 
E 5 HOH A 36 336 20 HOH HOH . 
E 5 HOH A 37 337 21 HOH HOH . 
E 5 HOH A 38 338 23 HOH HOH . 
E 5 HOH A 39 339 24 HOH HOH . 
E 5 HOH A 40 340 27 HOH HOH . 
E 5 HOH A 41 341 28 HOH HOH . 
E 5 HOH A 42 342 30 HOH HOH . 
E 5 HOH A 43 343 31 HOH HOH . 
E 5 HOH A 44 344 32 HOH HOH . 
E 5 HOH A 45 345 33 HOH HOH . 
E 5 HOH A 46 346 34 HOH HOH . 
E 5 HOH A 47 347 36 HOH HOH . 
E 5 HOH A 48 348 37 HOH HOH . 
E 5 HOH A 49 349 39 HOH HOH . 
E 5 HOH A 50 350 41 HOH HOH . 
E 5 HOH A 51 351 42 HOH HOH . 
E 5 HOH A 52 352 43 HOH HOH . 
E 5 HOH A 53 353 45 HOH HOH . 
E 5 HOH A 54 354 46 HOH HOH . 
E 5 HOH A 55 355 49 HOH HOH . 
E 5 HOH A 56 356 50 HOH HOH . 
E 5 HOH A 57 357 51 HOH HOH . 
E 5 HOH A 58 358 52 HOH HOH . 
E 5 HOH A 59 359 57 HOH HOH . 
E 5 HOH A 60 360 59 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N NO3 . . . D 4 -19.335 -2.944 -11.538 1 23.95 ? N NO3 203 A 1 
HETATM 2 O O1 NO3 . . . D 4 -20.418 -2.781 -11.012 1 21.26 ? O1 NO3 203 A 1 
HETATM 3 O O2 NO3 . . . D 4 -18.324 -2.049 -11.394 1 21.16 ? O2 NO3 203 A 1 
HETATM 4 O O3 NO3 . . . D 4 -19.149 -4.048 -12.3 1 27.88 ? O3 NO3 203 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           224 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#