data_4PIE # _model_server_result.job_id tJG0HVIXAYbzNXOxRc3G-A _model_server_result.datetime_utc '2024-12-18 10:03:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4pie # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 4PIE # _exptl.entry_id 4PIE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 507.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{(2S)-2-(3-chlorophenyl)-2-[(methylsulfonyl)amino]acetyl}-L-phenylalanyl-N-[(2Z)-2-iminoethyl]glycinamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4PIE _cell.length_a 41.312 _cell.length_b 44.437 _cell.length_c 98.921 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PIE _symmetry.cell_setting . _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 104 A CYS 104 1_555 B SG CYS 10 B CYS 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? covale ? covale1 A SG CYS 122 A CYS 122 1_555 C C32 3FO . A 3FO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.729 ? metalc ? metalc1 A NE2 HIS 36 A HIS 36 1_555 F ZN ZN . A ZN 304 2_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc2 A SG CYS 199 A CYS 199 1_555 F ZN ZN . A ZN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.625 ? metalc ? metalc3 F ZN ZN . A ZN 304 1_555 G OXT ACT . A ACT 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc4 F ZN ZN . A ZN 304 1_555 H O HOH . A HOH 405 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.827 ? # _chem_comp.formula 'C22 H26 Cl N5 O5 S' _chem_comp.formula_weight 507.99 _chem_comp.id 3FO _chem_comp.mon_nstd_flag . _chem_comp.name N-{(2S)-2-(3-chlorophenyl)-2-[(methylsulfonyl)amino]acetyl}-L-phenylalanyl-N-[(2Z)-2-iminoethyl]glycinamide _chem_comp.type peptide-like _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3 C2 3FO doub 1 n y C3 C4 3FO sing 2 n y C2 C1 3FO sing 3 n y CL1 C4 3FO sing 4 n n C4 C5 3FO doub 5 n y C1 C6 3FO doub 6 n y C5 C6 3FO sing 7 n y C6 C7 3FO sing 8 n n N8 C7 3FO sing 9 n n N8 S12 3FO sing 10 n n C7 C9 3FO sing 11 n n O15 S12 3FO doub 12 n n S12 O14 3FO doub 13 n n S12 C13 3FO sing 14 n n O11 C9 3FO doub 15 n n C9 N10 3FO sing 16 n n O19 C17 3FO doub 17 n n N10 C16 3FO sing 18 n n C17 C16 3FO sing 19 n n C17 N18 3FO sing 20 n n C27 N18 3FO sing 21 n n C27 C28 3FO sing 22 n n C16 C20 3FO sing 23 n n C28 N29 3FO sing 24 n n C28 O30 3FO doub 25 n n N29 C31 3FO sing 26 n n C32 N33 3FO doub 27 n n C32 C31 3FO sing 28 n n C20 C21 3FO sing 29 n n C22 C21 3FO doub 30 n y C22 C23 3FO sing 31 n y C21 C26 3FO sing 32 n y C23 C24 3FO doub 33 n y C26 C25 3FO doub 34 n y C24 C25 3FO sing 35 n y C1 H1 3FO sing 36 n n C2 H2 3FO sing 37 n n C3 H3 3FO sing 38 n n C13 H4 3FO sing 39 n n C13 H5 3FO sing 40 n n C13 H6 3FO sing 41 n n C16 H7 3FO sing 42 n n C20 H8 3FO sing 43 n n C20 H9 3FO sing 44 n n C22 H10 3FO sing 45 n n C23 H11 3FO sing 46 n n C24 H12 3FO sing 47 n n C25 H13 3FO sing 48 n n C26 H14 3FO sing 49 n n C27 H15 3FO sing 50 n n C27 H16 3FO sing 51 n n C5 H17 3FO sing 52 n n C7 H18 3FO sing 53 n n N8 H19 3FO sing 54 n n N10 H20 3FO sing 55 n n N18 H21 3FO sing 56 n n N29 H22 3FO sing 57 n n C31 H23 3FO sing 58 n n C31 H24 3FO sing 59 n n C32 H25 3FO sing 60 n n N33 H26 3FO sing 61 n n # _atom_sites.entry_id 4PIE _atom_sites.fract_transf_matrix[1][1] 0.024206 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022504 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010109 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 3FO A 1 301 1 3FO LI1 . D 4 SO4 A 1 302 1 SO4 SO4 . E 4 SO4 A 1 303 2 SO4 SO4 . F 5 ZN A 1 304 1 ZN ZN . G 6 ACT A 1 305 1 ACT ACT . H 7 HOH A 1 401 31 HOH HOH . H 7 HOH A 2 402 4 HOH HOH . H 7 HOH A 3 403 10 HOH HOH . H 7 HOH A 4 404 7 HOH HOH . H 7 HOH A 5 405 30 HOH HOH . H 7 HOH A 6 406 1 HOH HOH . H 7 HOH A 7 407 15 HOH HOH . H 7 HOH A 8 408 13 HOH HOH . H 7 HOH A 9 409 11 HOH HOH . H 7 HOH A 10 410 19 HOH HOH . H 7 HOH A 11 411 28 HOH HOH . H 7 HOH A 12 412 27 HOH HOH . H 7 HOH A 13 413 37 HOH HOH . H 7 HOH A 14 414 3 HOH HOH . H 7 HOH A 15 415 5 HOH HOH . H 7 HOH A 16 416 6 HOH HOH . H 7 HOH A 17 417 8 HOH HOH . H 7 HOH A 18 418 9 HOH HOH . H 7 HOH A 19 419 12 HOH HOH . H 7 HOH A 20 420 14 HOH HOH . H 7 HOH A 21 421 18 HOH HOH . H 7 HOH A 22 422 21 HOH HOH . H 7 HOH A 23 423 25 HOH HOH . H 7 HOH A 24 424 26 HOH HOH . H 7 HOH A 25 425 29 HOH HOH . H 7 HOH A 26 426 32 HOH HOH . H 7 HOH A 27 427 33 HOH HOH . H 7 HOH A 28 428 34 HOH HOH . H 7 HOH A 29 429 35 HOH HOH . H 7 HOH A 30 430 36 HOH HOH . I 7 HOH B 1 401 2 HOH HOH . I 7 HOH B 2 402 16 HOH HOH . I 7 HOH B 3 403 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 3FO . . . C 3 -0.564 6.328 -10.494 1 33.44 ? C1 3FO 301 A 1 HETATM 2 C C2 3FO . . . C 3 -0.418 5.767 -11.777 1 32.66 ? C2 3FO 301 A 1 HETATM 3 C C3 3FO . . . C 3 -1.088 4.575 -12.004 1 31.62 ? C3 3FO 301 A 1 HETATM 4 C C13 3FO . . . C 3 -3.189 7.849 -6.476 1 48.27 ? C13 3FO 301 A 1 HETATM 5 C C4 3FO . . . C 3 -1.858 4.014 -10.99 1 31.16 ? C4 3FO 301 A 1 HETATM 6 C C5 3FO . . . C 3 -2.024 4.581 -9.736 1 32.8 ? C5 3FO 301 A 1 HETATM 7 C C6 3FO . . . C 3 -1.332 5.741 -9.481 1 31.48 ? C6 3FO 301 A 1 HETATM 8 C C7 3FO . . . C 3 -1.436 6.417 -8.136 1 35 ? C7 3FO 301 A 1 HETATM 9 N N8 3FO . . . C 3 -1.487 7.811 -8.474 1 42 ? N8 3FO 301 A 1 HETATM 10 C C9 3FO . . . C 3 -0.214 5.994 -7.31 1 32.27 ? C9 3FO 301 A 1 HETATM 11 O O11 3FO . . . C 3 0.798 6.7 -7.311 1 27.81 ? O11 3FO 301 A 1 HETATM 12 S S12 3FO . . . C 3 -1.963 8.859 -7.348 1 53.81 ? S12 3FO 301 A 1 HETATM 13 O O14 3FO . . . C 3 -0.753 9.141 -6.563 1 51.58 ? O14 3FO 301 A 1 HETATM 14 O O15 3FO . . . C 3 -2.577 9.946 -8.069 1 51.72 ? O15 3FO 301 A 1 HETATM 15 CL CL1 3FO . . . C 3 -2.723 2.573 -11.344 1 40.23 ? CL1 3FO 301 A 1 HETATM 16 N N10 3FO . . . C 3 -0.301 4.809 -6.661 1 29.34 ? N10 3FO 301 A 1 HETATM 17 C C16 3FO . . . C 3 0.766 4.232 -5.807 1 30.31 ? C16 3FO 301 A 1 HETATM 18 C C17 3FO . . . C 3 1.074 2.792 -6.198 1 28.59 ? C17 3FO 301 A 1 HETATM 19 O O19 3FO . . . C 3 0.299 2.211 -6.909 1 29.48 ? O19 3FO 301 A 1 HETATM 20 C C20 3FO . . . C 3 0.224 4.147 -4.294 1 27.7 ? C20 3FO 301 A 1 HETATM 21 C C21 3FO . . . C 3 0.327 5.551 -3.665 1 31.49 ? C21 3FO 301 A 1 HETATM 22 C C22 3FO . . . C 3 -0.761 6.42 -3.775 1 34.48 ? C22 3FO 301 A 1 HETATM 23 C C26 3FO . . . C 3 1.496 5.991 -2.992 1 33.57 ? C26 3FO 301 A 1 HETATM 24 C C23 3FO . . . C 3 -0.673 7.719 -3.259 1 31.81 ? C23 3FO 301 A 1 HETATM 25 C C25 3FO . . . C 3 1.589 7.301 -2.454 1 36.03 ? C25 3FO 301 A 1 HETATM 26 C C24 3FO . . . C 3 0.48 8.162 -2.617 1 32.87 ? C24 3FO 301 A 1 HETATM 27 N N18 3FO . . . C 3 2.183 2.179 -5.715 1 27.21 ? N18 3FO 301 A 1 HETATM 28 C C27 3FO . . . C 3 2.42 0.763 -6.044 1 30.73 ? C27 3FO 301 A 1 HETATM 29 C C28 3FO . . . C 3 3.524 0.269 -5.132 1 30.41 ? C28 3FO 301 A 1 HETATM 30 O O30 3FO . . . C 3 4.307 1.123 -4.749 1 33.69 ? O30 3FO 301 A 1 HETATM 31 C C32 3FO . . . C 3 5.585 -2.377 -4.736 1 30.41 ? C32 3FO 301 A 1 HETATM 32 N N33 3FO . . . C 3 6.004 -3.397 -4.279 1 28.03 ? N33 3FO 301 A 1 HETATM 33 C C31 3FO . . . C 3 4.645 -1.634 -3.906 1 26.73 ? C31 3FO 301 A 1 HETATM 34 N N29 3FO . . . C 3 3.603 -1.067 -4.792 1 31.65 ? N29 3FO 301 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 34 #