data_4PIH # _model_server_result.job_id 2jNKYtqTiwW9Nzq_WmACYw _model_server_result.datetime_utc '2024-10-28 02:25:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4pih # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":101}' # _entry.id 4PIH # _exptl.entry_id 4PIH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 69.77 _cell.angle_beta 72.55 _cell.angle_gamma 73.12 _cell.entry_id 4PIH _cell.length_a 27.35 _cell.length_b 32.74 _cell.length_c 40.34 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PIH _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 PISA dimeric 2 software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,H 1 1 B,E,F,G,I 2 1 B,E,F,G,I 3 1 A,C,D,H 3 2 A,B,C,D,E,F,G,H,I 4 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_565 x,y+1,z 1 0 0 0 1 0 0 0 1 9.506654 31.329397 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 18 A GLU 18 1_555 C CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc2 A OD1 ASP 21 A ASP 21 1_555 C CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.654 ? metalc ? metalc3 A OD2 ASP 21 A ASP 21 1_555 C CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? metalc ? metalc4 A OE1 GLU 34 A GLU 34 1_555 E CA CA . B CA 101 1_645 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc5 C CA CA . A CA 101 1_555 H O HOH . A HOH 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc6 C CA CA . A CA 101 1_555 H O HOH . A HOH 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc7 C CA CA . A CA 101 1_555 H O HOH . A HOH 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc8 H O HOH . A HOH 212 1_465 E CA CA . B CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc9 H O HOH . A HOH 221 1_465 E CA CA . B CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc10 B O THR 9 B THR 9 1_555 E CA CA . B CA 101 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc11 B OE1 GLN 31 B GLN 31 1_555 F CA CA . B CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? metalc ? metalc12 B OD1 ASP 32 B ASP 32 1_555 F CA CA . B CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? metalc ? metalc13 B OE1 GLN 49 B GLN 49 1_555 E CA CA . B CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc14 B OE1 GLU 51 B GLU 51 1_555 E CA CA . B CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? metalc ? metalc15 B OE2 GLU 51 B GLU 51 1_555 E CA CA . B CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? metalc ? metalc16 F CA CA . B CA 102 1_555 I O HOH . B HOH 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4PIH _atom_sites.fract_transf_matrix[1][1] 0.036563 _atom_sites.fract_transf_matrix[1][2] -0.011092 _atom_sites.fract_transf_matrix[1][3] -0.008707 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.031918 _atom_sites.fract_transf_matrix[2][3] -0.009435 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.027097 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 101 2 CA CA . D 3 CL A 1 102 5 CL CL . E 2 CA B 1 101 1 CA CA . F 2 CA B 1 102 3 CA CA . G 3 CL B 1 103 4 CL CL . H 4 HOH A 1 201 29 HOH HOH . H 4 HOH A 2 202 126 HOH HOH . H 4 HOH A 3 203 139 HOH HOH . H 4 HOH A 4 204 111 HOH HOH . H 4 HOH A 5 205 151 HOH HOH . H 4 HOH A 6 206 91 HOH HOH . H 4 HOH A 7 207 87 HOH HOH . H 4 HOH A 8 208 190 HOH HOH . H 4 HOH A 9 209 64 HOH HOH . H 4 HOH A 10 210 96 HOH HOH . H 4 HOH A 11 211 160 HOH HOH . H 4 HOH A 12 212 11 HOH HOH . H 4 HOH A 13 213 13 HOH HOH . H 4 HOH A 14 214 19 HOH HOH . H 4 HOH A 15 215 10 HOH HOH . H 4 HOH A 16 216 192 HOH HOH . H 4 HOH A 17 217 46 HOH HOH . H 4 HOH A 18 218 35 HOH HOH . H 4 HOH A 19 219 144 HOH HOH . H 4 HOH A 20 220 2 HOH HOH . H 4 HOH A 21 221 12 HOH HOH . H 4 HOH A 22 222 81 HOH HOH . H 4 HOH A 23 223 83 HOH HOH . H 4 HOH A 24 224 70 HOH HOH . H 4 HOH A 25 225 119 HOH HOH . H 4 HOH A 26 226 73 HOH HOH . H 4 HOH A 27 227 63 HOH HOH . H 4 HOH A 28 228 71 HOH HOH . H 4 HOH A 29 229 123 HOH HOH . H 4 HOH A 30 230 60 HOH HOH . H 4 HOH A 31 231 118 HOH HOH . H 4 HOH A 32 232 166 HOH HOH . H 4 HOH A 33 233 59 HOH HOH . H 4 HOH A 34 234 92 HOH HOH . H 4 HOH A 35 235 168 HOH HOH . H 4 HOH A 36 236 4 HOH HOH . H 4 HOH A 37 237 15 HOH HOH . H 4 HOH A 38 238 18 HOH HOH . H 4 HOH A 39 239 21 HOH HOH . H 4 HOH A 40 240 37 HOH HOH . H 4 HOH A 41 241 39 HOH HOH . H 4 HOH A 42 242 50 HOH HOH . H 4 HOH A 43 243 52 HOH HOH . H 4 HOH A 44 244 58 HOH HOH . H 4 HOH A 45 245 66 HOH HOH . H 4 HOH A 46 246 79 HOH HOH . H 4 HOH A 47 247 82 HOH HOH . H 4 HOH A 48 248 90 HOH HOH . H 4 HOH A 49 249 93 HOH HOH . H 4 HOH A 50 250 95 HOH HOH . H 4 HOH A 51 251 100 HOH HOH . H 4 HOH A 52 252 102 HOH HOH . H 4 HOH A 53 253 104 HOH HOH . H 4 HOH A 54 254 114 HOH HOH . H 4 HOH A 55 255 120 HOH HOH . H 4 HOH A 56 256 121 HOH HOH . H 4 HOH A 57 257 141 HOH HOH . H 4 HOH A 58 258 148 HOH HOH . H 4 HOH A 59 259 186 HOH HOH . I 4 HOH B 1 201 162 HOH HOH . I 4 HOH B 2 202 32 HOH HOH . I 4 HOH B 3 203 128 HOH HOH . I 4 HOH B 4 204 122 HOH HOH . I 4 HOH B 5 205 112 HOH HOH . I 4 HOH B 6 206 103 HOH HOH . I 4 HOH B 7 207 69 HOH HOH . I 4 HOH B 8 208 98 HOH HOH . I 4 HOH B 9 209 191 HOH HOH . I 4 HOH B 10 210 56 HOH HOH . I 4 HOH B 11 211 14 HOH HOH . I 4 HOH B 12 212 16 HOH HOH . I 4 HOH B 13 213 42 HOH HOH . I 4 HOH B 14 214 173 HOH HOH . I 4 HOH B 15 215 31 HOH HOH . I 4 HOH B 16 216 3 HOH HOH . I 4 HOH B 17 217 146 HOH HOH . I 4 HOH B 18 218 132 HOH HOH . I 4 HOH B 19 219 8 HOH HOH . I 4 HOH B 20 220 25 HOH HOH . I 4 HOH B 21 221 40 HOH HOH . I 4 HOH B 22 222 54 HOH HOH . I 4 HOH B 23 223 17 HOH HOH . I 4 HOH B 24 224 48 HOH HOH . I 4 HOH B 25 225 76 HOH HOH . I 4 HOH B 26 226 65 HOH HOH . I 4 HOH B 27 227 117 HOH HOH . I 4 HOH B 28 228 20 HOH HOH . I 4 HOH B 29 229 68 HOH HOH . I 4 HOH B 30 230 84 HOH HOH . I 4 HOH B 31 231 41 HOH HOH . I 4 HOH B 32 232 116 HOH HOH . I 4 HOH B 33 233 110 HOH HOH . I 4 HOH B 34 234 61 HOH HOH . I 4 HOH B 35 235 85 HOH HOH . I 4 HOH B 36 236 172 HOH HOH . I 4 HOH B 37 237 78 HOH HOH . I 4 HOH B 38 238 135 HOH HOH . I 4 HOH B 39 239 133 HOH HOH . I 4 HOH B 40 240 6 HOH HOH . I 4 HOH B 41 241 47 HOH HOH . I 4 HOH B 42 242 80 HOH HOH . I 4 HOH B 43 243 24 HOH HOH . I 4 HOH B 44 244 34 HOH HOH . I 4 HOH B 45 245 86 HOH HOH . I 4 HOH B 46 246 72 HOH HOH . I 4 HOH B 47 247 77 HOH HOH . I 4 HOH B 48 248 153 HOH HOH . I 4 HOH B 49 249 33 HOH HOH . I 4 HOH B 50 250 113 HOH HOH . I 4 HOH B 51 251 88 HOH HOH . I 4 HOH B 52 252 57 HOH HOH . I 4 HOH B 53 253 62 HOH HOH . I 4 HOH B 54 254 30 HOH HOH . I 4 HOH B 55 255 1 HOH HOH . I 4 HOH B 56 256 5 HOH HOH . I 4 HOH B 57 257 7 HOH HOH . I 4 HOH B 58 258 9 HOH HOH . I 4 HOH B 59 259 22 HOH HOH . I 4 HOH B 60 260 23 HOH HOH . I 4 HOH B 61 261 26 HOH HOH . I 4 HOH B 62 262 27 HOH HOH . I 4 HOH B 63 263 28 HOH HOH . I 4 HOH B 64 264 36 HOH HOH . I 4 HOH B 65 265 38 HOH HOH . I 4 HOH B 66 266 45 HOH HOH . I 4 HOH B 67 267 49 HOH HOH . I 4 HOH B 68 268 94 HOH HOH . I 4 HOH B 69 269 105 HOH HOH . I 4 HOH B 70 270 115 HOH HOH . I 4 HOH B 71 271 136 HOH HOH . I 4 HOH B 72 272 152 HOH HOH . I 4 HOH B 73 273 158 HOH HOH . I 4 HOH B 74 274 163 HOH HOH . I 4 HOH B 75 275 189 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x -16.457 _atom_site.Cartn_y 34.631 _atom_site.Cartn_z 20.921 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 9.33 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 101 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #