data_4PII # _model_server_result.job_id dwoy8Lu8pWnRTDq3DzKkMw _model_server_result.datetime_utc '2024-11-05 00:22:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4pii # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":310}' # _entry.id 4PII # _exptl.entry_id 4PII _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4PII _cell.length_a 98.43 _cell.length_b 98.43 _cell.length_c 65.23 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PII _symmetry.cell_setting . _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id K _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 160 n y N1 C5 IMD sing 161 n y N1 HN1 IMD sing 162 n n C2 N3 IMD doub 163 n y C2 H2 IMD sing 164 n n N3 C4 IMD sing 165 n y N3 HN3 IMD sing 166 n n C4 C5 IMD doub 167 n y C4 H4 IMD sing 168 n n C5 H5 IMD sing 169 n n # _atom_sites.entry_id 4PII _atom_sites.fract_transf_matrix[1][1] 0.01016 _atom_sites.fract_transf_matrix[1][2] 0.005866 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011731 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01533 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 301 1 CL CL . C 2 CL A 1 302 2 CL CL . D 2 CL A 1 303 3 CL CL . E 2 CL A 1 304 4 CL CL . F 2 CL A 1 305 5 CL CL . G 2 CL A 1 306 6 CL CL . H 2 CL A 1 307 7 CL CL . I 2 CL A 1 308 8 CL CL . J 2 CL A 1 309 9 CL CL . K 3 IMD A 1 310 1 IMD IMD . L 4 HOH A 1 401 3 HOH HOH . L 4 HOH A 2 402 36 HOH HOH . L 4 HOH A 3 403 42 HOH HOH . L 4 HOH A 4 404 37 HOH HOH . L 4 HOH A 5 405 2 HOH HOH . L 4 HOH A 6 406 9 HOH HOH . L 4 HOH A 7 407 53 HOH HOH . L 4 HOH A 8 408 41 HOH HOH . L 4 HOH A 9 409 45 HOH HOH . L 4 HOH A 10 410 19 HOH HOH . L 4 HOH A 11 411 8 HOH HOH . L 4 HOH A 12 412 5 HOH HOH . L 4 HOH A 13 413 4 HOH HOH . L 4 HOH A 14 414 47 HOH HOH . L 4 HOH A 15 415 59 HOH HOH . L 4 HOH A 16 416 63 HOH HOH . L 4 HOH A 17 417 68 HOH HOH . L 4 HOH A 18 418 35 HOH HOH . L 4 HOH A 19 419 32 HOH HOH . L 4 HOH A 20 420 40 HOH HOH . L 4 HOH A 21 421 27 HOH HOH . L 4 HOH A 22 422 29 HOH HOH . L 4 HOH A 23 423 10 HOH HOH . L 4 HOH A 24 424 26 HOH HOH . L 4 HOH A 25 425 25 HOH HOH . L 4 HOH A 26 426 57 HOH HOH . L 4 HOH A 27 427 38 HOH HOH . L 4 HOH A 28 428 39 HOH HOH . L 4 HOH A 29 429 48 HOH HOH . L 4 HOH A 30 430 60 HOH HOH . L 4 HOH A 31 431 12 HOH HOH . L 4 HOH A 32 432 33 HOH HOH . L 4 HOH A 33 433 61 HOH HOH . L 4 HOH A 34 434 31 HOH HOH . L 4 HOH A 35 435 64 HOH HOH . L 4 HOH A 36 436 1 HOH HOH . L 4 HOH A 37 437 6 HOH HOH . L 4 HOH A 38 438 7 HOH HOH . L 4 HOH A 39 439 11 HOH HOH . L 4 HOH A 40 440 13 HOH HOH . L 4 HOH A 41 441 14 HOH HOH . L 4 HOH A 42 442 15 HOH HOH . L 4 HOH A 43 443 16 HOH HOH . L 4 HOH A 44 444 17 HOH HOH . L 4 HOH A 45 445 18 HOH HOH . L 4 HOH A 46 446 20 HOH HOH . L 4 HOH A 47 447 21 HOH HOH . L 4 HOH A 48 448 22 HOH HOH . L 4 HOH A 49 449 23 HOH HOH . L 4 HOH A 50 450 24 HOH HOH . L 4 HOH A 51 451 28 HOH HOH . L 4 HOH A 52 452 30 HOH HOH . L 4 HOH A 53 453 34 HOH HOH . L 4 HOH A 54 454 43 HOH HOH . L 4 HOH A 55 455 44 HOH HOH . L 4 HOH A 56 456 46 HOH HOH . L 4 HOH A 57 457 49 HOH HOH . L 4 HOH A 58 458 50 HOH HOH . L 4 HOH A 59 459 51 HOH HOH . L 4 HOH A 60 460 52 HOH HOH . L 4 HOH A 61 461 54 HOH HOH . L 4 HOH A 62 462 55 HOH HOH . L 4 HOH A 63 463 56 HOH HOH . L 4 HOH A 64 464 58 HOH HOH . L 4 HOH A 65 465 62 HOH HOH . L 4 HOH A 66 466 65 HOH HOH . L 4 HOH A 67 467 66 HOH HOH . L 4 HOH A 68 468 67 HOH HOH . L 4 HOH A 69 469 69 HOH HOH . L 4 HOH A 70 470 70 HOH HOH . L 4 HOH A 71 471 71 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . K 3 47.142 41.319 56.808 0.9 38.22 ? N1 IMD 310 A 1 HETATM 2 C C2 IMD . . . K 3 46.499 41.299 58.004 0.9 35.06 ? C2 IMD 310 A 1 HETATM 3 N N3 IMD . . . K 3 46.67 40.079 58.573 0.9 36.98 ? N3 IMD 310 A 1 HETATM 4 C C4 IMD . . . K 3 47.426 39.32 57.74 0.9 31.91 ? C4 IMD 310 A 1 HETATM 5 C C5 IMD . . . K 3 47.718 40.105 56.629 0.9 34.64 ? C5 IMD 310 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #