data_4PJ1 # _model_server_result.job_id rDifxsICoioFr_3Pf2Z4WQ _model_server_result.datetime_utc '2024-11-21 13:20:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4pj1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"DA","auth_seq_id":602}' # _entry.id 4PJ1 # _exptl.entry_id 4PJ1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 14 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4PJ1 _cell.length_a 199.1 _cell.length_b 199.1 _cell.length_c 627.39 _cell.Z_PDB 112 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PJ1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details 28-meric _pdbx_struct_assembly.oligomeric_count 28 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 DA N N ? 4 FA N N ? 4 HA N N ? 4 JA N N ? 4 LA N N ? 4 NA N N ? 4 PA N N ? 4 RA N N ? 4 TA N N ? 4 VA N N ? 4 XA N N ? 4 ZA N N ? 4 BB N N ? 4 DB N N # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4PJ1 _atom_sites.fract_transf_matrix[1][1] 0.005023 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005023 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.001594 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code CA 3 ADP A 1 601 1 ADP ADP . DA 4 MG A 1 602 1 MG MG . EA 3 ADP B 1 601 2 ADP ADP . FA 4 MG B 1 602 2 MG MG . GA 3 ADP C 1 601 3 ADP ADP . HA 4 MG C 1 602 3 MG MG . IA 3 ADP D 1 601 4 ADP ADP . JA 4 MG D 1 602 4 MG MG . KA 3 ADP E 1 601 5 ADP ADP . LA 4 MG E 1 602 5 MG MG . MA 3 ADP F 1 601 6 ADP ADP . NA 4 MG F 1 602 6 MG MG . OA 3 ADP G 1 601 7 ADP ADP . PA 4 MG G 1 602 7 MG MG . QA 3 ADP H 1 601 14 ADP ADP . RA 4 MG H 1 602 14 MG MG . SA 3 ADP I 1 601 8 ADP ADP . TA 4 MG I 1 602 8 MG MG . UA 3 ADP J 1 601 9 ADP ADP . VA 4 MG J 1 602 9 MG MG . WA 3 ADP K 1 601 10 ADP ADP . XA 4 MG K 1 602 10 MG MG . YA 3 ADP L 1 601 11 ADP ADP . ZA 4 MG L 1 602 11 MG MG . AB 3 ADP M 1 601 12 ADP ADP . BB 4 MG M 1 602 12 MG MG . CB 3 ADP N 1 601 13 ADP ADP . DB 4 MG N 1 602 13 MG MG . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id DA _atom_site.label_entity_id 4 _atom_site.Cartn_x 97.685 _atom_site.Cartn_y -54.53 _atom_site.Cartn_z -21.166 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 72.24 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 602 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 81 _model_server_stats.parse_time_ms 46 _model_server_stats.create_model_time_ms 342 _model_server_stats.query_time_ms 1071 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #