data_4PJV
#
_model_server_result.job_id            Hmxg6wieofMOk-qd7zVkgw 
_model_server_result.datetime_utc      '2024-11-25 12:42:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4pjv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":602}' 
#
_entry.id    4PJV 
#
_exptl.entry_id    4PJV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         77.28 
_cell.angle_beta          79.99 
_cell.angle_gamma         63.88 
_cell.entry_id            4PJV 
_cell.length_a            52.86 
_cell.length_b            57.74 
_cell.length_c            69.29 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4PJV 
_symmetry.cell_setting             . 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,H 1 1 
B,F,G,I 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 G N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 175 n n 
C1 C2 GOL sing 176 n n 
C1 H11 GOL sing 177 n n 
C1 H12 GOL sing 178 n n 
O1 HO1 GOL sing 179 n n 
C2 O2 GOL sing 180 n n 
C2 C3 GOL sing 181 n n 
C2 H2 GOL sing 182 n n 
O2 HO2 GOL sing 183 n n 
C3 O3 GOL sing 184 n n 
C3 H31 GOL sing 185 n n 
C3 H32 GOL sing 186 n n 
O3 HO3 GOL sing 187 n n 
#
_atom_sites.entry_id                     4PJV 
_atom_sites.fract_transf_matrix[1][1]    0.018918 
_atom_sites.fract_transf_matrix[1][2]    -0.009274 
_atom_sites.fract_transf_matrix[1][3]    -0.001857 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019288 
_atom_sites.fract_transf_matrix[2][3]    -0.003176 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014852 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 2YQ A 1 601 601 2YQ LIG . 
D 3 GOL A 1 602 611 GOL GOL . 
E 3 GOL A 1 603 616 GOL GOL . 
F 2 2YQ B 1 601 601 2YQ LIG . 
G 3 GOL B 1 602 616 GOL GOL . 
H 4 HOH A 1 701 80 HOH HOH . 
H 4 HOH A 2 702 52 HOH HOH . 
H 4 HOH A 3 703 123 HOH HOH . 
H 4 HOH A 4 704 31 HOH HOH . 
H 4 HOH A 5 705 125 HOH HOH . 
H 4 HOH A 6 706 60 HOH HOH . 
H 4 HOH A 7 707 119 HOH HOH . 
H 4 HOH A 8 708 20 HOH HOH . 
H 4 HOH A 9 709 12 HOH HOH . 
H 4 HOH A 10 710 13 HOH HOH . 
H 4 HOH A 11 711 14 HOH HOH . 
H 4 HOH A 12 712 15 HOH HOH . 
H 4 HOH A 13 713 16 HOH HOH . 
H 4 HOH A 14 714 17 HOH HOH . 
H 4 HOH A 15 715 18 HOH HOH . 
H 4 HOH A 16 716 19 HOH HOH . 
H 4 HOH A 17 717 21 HOH HOH . 
H 4 HOH A 18 718 23 HOH HOH . 
H 4 HOH A 19 719 24 HOH HOH . 
H 4 HOH A 20 720 25 HOH HOH . 
H 4 HOH A 21 721 26 HOH HOH . 
H 4 HOH A 22 722 27 HOH HOH . 
H 4 HOH A 23 723 28 HOH HOH . 
H 4 HOH A 24 724 29 HOH HOH . 
H 4 HOH A 25 725 30 HOH HOH . 
H 4 HOH A 26 726 32 HOH HOH . 
H 4 HOH A 27 727 33 HOH HOH . 
H 4 HOH A 28 728 34 HOH HOH . 
H 4 HOH A 29 729 35 HOH HOH . 
H 4 HOH A 30 730 36 HOH HOH . 
H 4 HOH A 31 731 38 HOH HOH . 
H 4 HOH A 32 732 40 HOH HOH . 
H 4 HOH A 33 733 41 HOH HOH . 
H 4 HOH A 34 734 43 HOH HOH . 
H 4 HOH A 35 735 45 HOH HOH . 
H 4 HOH A 36 736 46 HOH HOH . 
H 4 HOH A 37 737 48 HOH HOH . 
H 4 HOH A 38 738 49 HOH HOH . 
H 4 HOH A 39 739 50 HOH HOH . 
H 4 HOH A 40 740 54 HOH HOH . 
H 4 HOH A 41 741 56 HOH HOH . 
H 4 HOH A 42 742 57 HOH HOH . 
H 4 HOH A 43 743 58 HOH HOH . 
H 4 HOH A 44 744 67 HOH HOH . 
H 4 HOH A 45 745 68 HOH HOH . 
H 4 HOH A 46 746 69 HOH HOH . 
H 4 HOH A 47 747 71 HOH HOH . 
H 4 HOH A 48 748 74 HOH HOH . 
H 4 HOH A 49 749 76 HOH HOH . 
H 4 HOH A 50 750 77 HOH HOH . 
H 4 HOH A 51 751 78 HOH HOH . 
H 4 HOH A 52 752 79 HOH HOH . 
H 4 HOH A 53 753 81 HOH HOH . 
H 4 HOH A 54 754 82 HOH HOH . 
H 4 HOH A 55 755 83 HOH HOH . 
H 4 HOH A 56 756 90 HOH HOH . 
H 4 HOH A 57 757 91 HOH HOH . 
H 4 HOH A 58 758 109 HOH HOH . 
H 4 HOH A 59 759 111 HOH HOH . 
H 4 HOH A 60 760 112 HOH HOH . 
H 4 HOH A 61 761 113 HOH HOH . 
H 4 HOH A 62 762 116 HOH HOH . 
H 4 HOH A 63 763 117 HOH HOH . 
H 4 HOH A 64 764 118 HOH HOH . 
H 4 HOH A 65 765 120 HOH HOH . 
H 4 HOH A 66 766 124 HOH HOH . 
H 4 HOH A 67 767 126 HOH HOH . 
H 4 HOH A 68 768 127 HOH HOH . 
H 4 HOH A 69 769 135 HOH HOH . 
H 4 HOH A 70 770 136 HOH HOH . 
H 4 HOH A 71 771 137 HOH HOH . 
H 4 HOH A 72 772 140 HOH HOH . 
H 4 HOH A 73 773 143 HOH HOH . 
H 4 HOH A 74 774 146 HOH HOH . 
I 4 HOH B 1 701 87 HOH HOH . 
I 4 HOH B 2 702 84 HOH HOH . 
I 4 HOH B 3 703 6 HOH HOH . 
I 4 HOH B 4 704 103 HOH HOH . 
I 4 HOH B 5 705 145 HOH HOH . 
I 4 HOH B 6 706 95 HOH HOH . 
I 4 HOH B 7 707 88 HOH HOH . 
I 4 HOH B 8 708 96 HOH HOH . 
I 4 HOH B 9 709 144 HOH HOH . 
I 4 HOH B 10 710 132 HOH HOH . 
I 4 HOH B 11 711 115 HOH HOH . 
I 4 HOH B 12 712 1 HOH HOH . 
I 4 HOH B 13 713 2 HOH HOH . 
I 4 HOH B 14 714 3 HOH HOH . 
I 4 HOH B 15 715 4 HOH HOH . 
I 4 HOH B 16 716 5 HOH HOH . 
I 4 HOH B 17 717 7 HOH HOH . 
I 4 HOH B 18 718 8 HOH HOH . 
I 4 HOH B 19 719 9 HOH HOH . 
I 4 HOH B 20 720 10 HOH HOH . 
I 4 HOH B 21 721 11 HOH HOH . 
I 4 HOH B 22 722 37 HOH HOH . 
I 4 HOH B 23 723 39 HOH HOH . 
I 4 HOH B 24 724 42 HOH HOH . 
I 4 HOH B 25 725 44 HOH HOH . 
I 4 HOH B 26 726 47 HOH HOH . 
I 4 HOH B 27 727 51 HOH HOH . 
I 4 HOH B 28 728 53 HOH HOH . 
I 4 HOH B 29 729 55 HOH HOH . 
I 4 HOH B 30 730 59 HOH HOH . 
I 4 HOH B 31 731 61 HOH HOH . 
I 4 HOH B 32 732 62 HOH HOH . 
I 4 HOH B 33 733 63 HOH HOH . 
I 4 HOH B 34 734 64 HOH HOH . 
I 4 HOH B 35 735 65 HOH HOH . 
I 4 HOH B 36 736 66 HOH HOH . 
I 4 HOH B 37 737 72 HOH HOH . 
I 4 HOH B 38 738 73 HOH HOH . 
I 4 HOH B 39 739 85 HOH HOH . 
I 4 HOH B 40 740 86 HOH HOH . 
I 4 HOH B 41 741 89 HOH HOH . 
I 4 HOH B 42 742 92 HOH HOH . 
I 4 HOH B 43 743 93 HOH HOH . 
I 4 HOH B 44 744 94 HOH HOH . 
I 4 HOH B 45 745 97 HOH HOH . 
I 4 HOH B 46 746 98 HOH HOH . 
I 4 HOH B 47 747 99 HOH HOH . 
I 4 HOH B 48 748 100 HOH HOH . 
I 4 HOH B 49 749 101 HOH HOH . 
I 4 HOH B 50 750 102 HOH HOH . 
I 4 HOH B 51 751 104 HOH HOH . 
I 4 HOH B 52 752 105 HOH HOH . 
I 4 HOH B 53 753 106 HOH HOH . 
I 4 HOH B 54 754 107 HOH HOH . 
I 4 HOH B 55 755 108 HOH HOH . 
I 4 HOH B 56 756 110 HOH HOH . 
I 4 HOH B 57 757 114 HOH HOH . 
I 4 HOH B 58 758 121 HOH HOH . 
I 4 HOH B 59 759 122 HOH HOH . 
I 4 HOH B 60 760 128 HOH HOH . 
I 4 HOH B 61 761 129 HOH HOH . 
I 4 HOH B 62 762 130 HOH HOH . 
I 4 HOH B 63 763 131 HOH HOH . 
I 4 HOH B 64 764 133 HOH HOH . 
I 4 HOH B 65 765 134 HOH HOH . 
I 4 HOH B 66 766 138 HOH HOH . 
I 4 HOH B 67 767 139 HOH HOH . 
I 4 HOH B 68 768 141 HOH HOH . 
I 4 HOH B 69 769 142 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . G 3 -1.177 21.023 -53.481 1 7.13 ? C1 GOL 602 B 1 
HETATM 2 O O1 GOL . . . G 3 -2.548 20.596 -53.283 1 7.39 ? O1 GOL 602 B 1 
HETATM 3 C C2 GOL . . . G 3 -0.39 21.45 -52.227 1 7.2 ? C2 GOL 602 B 1 
HETATM 4 O O2 GOL . . . G 3 -1.084 21.413 -50.971 1 7.27 ? O2 GOL 602 B 1 
HETATM 5 C C3 GOL . . . G 3 0.844 20.569 -52.056 1 7.26 ? C3 GOL 602 B 1 
HETATM 6 O O3 GOL . . . G 3 1.696 21.185 -51.087 1 7.23 ? O3 GOL 602 B 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           30 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           6 
#