data_4PKV
#
_model_server_result.job_id            4Zj4t6sQlOx5bWVVNt5qIA 
_model_server_result.datetime_utc      '2024-12-26 17:21:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4pkv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":801}' 
#
_entry.id    4PKV 
#
_exptl.entry_id    4PKV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              395.448 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N~2~-[4-(aminomethyl)benzyl]-N~2~-[(4-fluoro-3-methylphenyl)sulfonyl]-N-hydroxy-D-alaninamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4PKV 
_cell.length_a            57.48 
_cell.length_b            78.729 
_cell.length_c            139.09 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4PKV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 425 A HIS 686 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? 
metalc ? metalc2 A NE2 HIS 429 A HIS 690 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? 
metalc ? metalc3 A OE1 GLU 474 A GLU 735 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? 
metalc ? metalc4 B O3 30R . A 30R 801 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? 
metalc ? metalc5 B O5 30R . A 30R 801 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? 
#
_chem_comp.formula           'C18 H22 F N3 O4 S' 
_chem_comp.formula_weight    395.448 
_chem_comp.id                30R 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N~2~-[4-(aminomethyl)benzyl]-N~2~-[(4-fluoro-3-methylphenyl)sulfonyl]-N-hydroxy-D-alaninamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C21 C20 30R doub 1 n y 
C21 C22 30R sing 2 n y 
C20 C19 30R sing 3 n y 
C3 C22 30R sing 4 n n 
C3 N5 30R sing 5 n n 
O8 S7 30R doub 6 n n 
O9 S7 30R doub 7 n n 
C22 C23 30R doub 8 n y 
C28 C1 30R sing 9 n n 
S7 N6 30R sing 10 n n 
S7 C10 30R sing 11 n n 
C19 C18 30R sing 12 n n 
C19 C24 30R doub 13 n y 
C1 N6 30R sing 14 n n 
C1 C2 30R sing 15 n n 
N6 C18 30R sing 16 n n 
C23 C24 30R sing 17 n y 
C10 C11 30R doub 18 n y 
C10 C15 30R sing 19 n y 
C2 N4 30R sing 20 n n 
C2 O3 30R doub 21 n n 
N4 O5 30R sing 22 n n 
C11 C12 30R sing 23 n y 
C15 C14 30R doub 24 n y 
C12 C17 30R sing 25 n n 
C12 C13 30R doub 26 n y 
C14 C13 30R sing 27 n y 
C13 F16 30R sing 28 n n 
C1 H1 30R sing 29 n n 
C3 H2 30R sing 30 n n 
C3 H3 30R sing 31 n n 
N4 H4 30R sing 32 n n 
N5 H5 30R sing 33 n n 
N5 H6 30R sing 34 n n 
C11 H8 30R sing 35 n n 
C14 H9 30R sing 36 n n 
C15 H10 30R sing 37 n n 
C17 H11 30R sing 38 n n 
C17 H12 30R sing 39 n n 
C17 H13 30R sing 40 n n 
C18 H14 30R sing 41 n n 
C18 H15 30R sing 42 n n 
C20 H16 30R sing 43 n n 
C21 H17 30R sing 44 n n 
C23 H18 30R sing 45 n n 
C24 H19 30R sing 46 n n 
C28 H20 30R sing 47 n n 
C28 H21 30R sing 48 n n 
C28 H22 30R sing 49 n n 
O5 H23 30R sing 50 n n 
#
_atom_sites.entry_id                     4PKV 
_atom_sites.fract_transf_matrix[1][1]    0.017397 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012702 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00719 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 30R A 1 801 1 30R Z96 . 
C 3 ZN A 1 802 1 ZN ZN . 
D 4 HOH A 1 901 98 HOH HOH . 
D 4 HOH A 2 902 50 HOH HOH . 
D 4 HOH A 3 903 20 HOH HOH . 
D 4 HOH A 4 904 35 HOH HOH . 
D 4 HOH A 5 905 16 HOH HOH . 
D 4 HOH A 6 906 66 HOH HOH . 
D 4 HOH A 7 907 57 HOH HOH . 
D 4 HOH A 8 908 24 HOH HOH . 
D 4 HOH A 9 909 25 HOH HOH . 
D 4 HOH A 10 910 106 HOH HOH . 
D 4 HOH A 11 911 47 HOH HOH . 
D 4 HOH A 12 912 3 HOH HOH . 
D 4 HOH A 13 913 52 HOH HOH . 
D 4 HOH A 14 914 94 HOH HOH . 
D 4 HOH A 15 915 80 HOH HOH . 
D 4 HOH A 16 916 84 HOH HOH . 
D 4 HOH A 17 917 34 HOH HOH . 
D 4 HOH A 18 918 1 HOH HOH . 
D 4 HOH A 19 919 2 HOH HOH . 
D 4 HOH A 20 920 4 HOH HOH . 
D 4 HOH A 21 921 5 HOH HOH . 
D 4 HOH A 22 922 6 HOH HOH . 
D 4 HOH A 23 923 7 HOH HOH . 
D 4 HOH A 24 924 8 HOH HOH . 
D 4 HOH A 25 925 9 HOH HOH . 
D 4 HOH A 26 926 10 HOH HOH . 
D 4 HOH A 27 927 11 HOH HOH . 
D 4 HOH A 28 928 12 HOH HOH . 
D 4 HOH A 29 929 13 HOH HOH . 
D 4 HOH A 30 930 14 HOH HOH . 
D 4 HOH A 31 931 15 HOH HOH . 
D 4 HOH A 32 932 17 HOH HOH . 
D 4 HOH A 33 933 18 HOH HOH . 
D 4 HOH A 34 934 19 HOH HOH . 
D 4 HOH A 35 935 21 HOH HOH . 
D 4 HOH A 36 936 22 HOH HOH . 
D 4 HOH A 37 937 23 HOH HOH . 
D 4 HOH A 38 938 26 HOH HOH . 
D 4 HOH A 39 939 27 HOH HOH . 
D 4 HOH A 40 940 28 HOH HOH . 
D 4 HOH A 41 941 29 HOH HOH . 
D 4 HOH A 42 942 30 HOH HOH . 
D 4 HOH A 43 943 31 HOH HOH . 
D 4 HOH A 44 944 32 HOH HOH . 
D 4 HOH A 45 945 33 HOH HOH . 
D 4 HOH A 46 946 36 HOH HOH . 
D 4 HOH A 47 947 37 HOH HOH . 
D 4 HOH A 48 948 38 HOH HOH . 
D 4 HOH A 49 949 39 HOH HOH . 
D 4 HOH A 50 950 40 HOH HOH . 
D 4 HOH A 51 951 41 HOH HOH . 
D 4 HOH A 52 952 42 HOH HOH . 
D 4 HOH A 53 953 43 HOH HOH . 
D 4 HOH A 54 954 44 HOH HOH . 
D 4 HOH A 55 955 45 HOH HOH . 
D 4 HOH A 56 956 46 HOH HOH . 
D 4 HOH A 57 957 48 HOH HOH . 
D 4 HOH A 58 958 49 HOH HOH . 
D 4 HOH A 59 959 51 HOH HOH . 
D 4 HOH A 60 960 53 HOH HOH . 
D 4 HOH A 61 961 54 HOH HOH . 
D 4 HOH A 62 962 55 HOH HOH . 
D 4 HOH A 63 963 56 HOH HOH . 
D 4 HOH A 64 964 58 HOH HOH . 
D 4 HOH A 65 965 59 HOH HOH . 
D 4 HOH A 66 966 60 HOH HOH . 
D 4 HOH A 67 967 61 HOH HOH . 
D 4 HOH A 68 968 62 HOH HOH . 
D 4 HOH A 69 969 63 HOH HOH . 
D 4 HOH A 70 970 64 HOH HOH . 
D 4 HOH A 71 971 65 HOH HOH . 
D 4 HOH A 72 972 67 HOH HOH . 
D 4 HOH A 73 973 68 HOH HOH . 
D 4 HOH A 74 974 69 HOH HOH . 
D 4 HOH A 75 975 70 HOH HOH . 
D 4 HOH A 76 976 71 HOH HOH . 
D 4 HOH A 77 977 72 HOH HOH . 
D 4 HOH A 78 978 73 HOH HOH . 
D 4 HOH A 79 979 74 HOH HOH . 
D 4 HOH A 80 980 75 HOH HOH . 
D 4 HOH A 81 981 76 HOH HOH . 
D 4 HOH A 82 982 77 HOH HOH . 
D 4 HOH A 83 983 78 HOH HOH . 
D 4 HOH A 84 984 79 HOH HOH . 
D 4 HOH A 85 985 81 HOH HOH . 
D 4 HOH A 86 986 82 HOH HOH . 
D 4 HOH A 87 987 83 HOH HOH . 
D 4 HOH A 88 988 85 HOH HOH . 
D 4 HOH A 89 989 86 HOH HOH . 
D 4 HOH A 90 990 87 HOH HOH . 
D 4 HOH A 91 991 88 HOH HOH . 
D 4 HOH A 92 992 89 HOH HOH . 
D 4 HOH A 93 993 90 HOH HOH . 
D 4 HOH A 94 994 91 HOH HOH . 
D 4 HOH A 95 995 92 HOH HOH . 
D 4 HOH A 96 996 93 HOH HOH . 
D 4 HOH A 97 997 95 HOH HOH . 
D 4 HOH A 98 998 96 HOH HOH . 
D 4 HOH A 99 999 97 HOH HOH . 
D 4 HOH A 100 1000 99 HOH HOH . 
D 4 HOH A 101 1001 100 HOH HOH . 
D 4 HOH A 102 1002 101 HOH HOH . 
D 4 HOH A 103 1003 102 HOH HOH . 
D 4 HOH A 104 1004 103 HOH HOH . 
D 4 HOH A 105 1005 104 HOH HOH . 
D 4 HOH A 106 1006 105 HOH HOH . 
D 4 HOH A 107 1007 107 HOH HOH . 
D 4 HOH A 108 1008 108 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 30R . . . B 2 11.584 19.118 26.679 1 59.01 ? C1 30R 801 A 1 
HETATM 2 C C2 30R . . . B 2 12.351 19.2 28.001 1 49.8 ? C2 30R 801 A 1 
HETATM 3 C C3 30R . . . B 2 4.545 15.42 25.512 1 67.46 ? C3 30R 801 A 1 
HETATM 4 O O3 30R . . . B 2 12.319 18.21 29.079 1 51.83 ? O3 30R 801 A 1 
HETATM 5 N N4 30R . . . B 2 13.166 20.245 28.231 1 49.87 ? N4 30R 801 A 1 
HETATM 6 N N5 30R . . . B 2 3.812 15.086 26.768 1 67.87 ? N5 30R 801 A 1 
HETATM 7 C C10 30R . . . B 2 8.614 20.81 27.924 1 70.23 ? C10 30R 801 A 1 
HETATM 8 C C11 30R . . . B 2 7.518 20.131 28.466 1 66.51 ? C11 30R 801 A 1 
HETATM 9 C C12 30R . . . B 2 7.062 20.44 29.739 1 68.61 ? C12 30R 801 A 1 
HETATM 10 C C13 30R . . . B 2 7.707 21.423 30.473 1 66.66 ? C13 30R 801 A 1 
HETATM 11 C C14 30R . . . B 2 8.809 22.104 29.948 1 61.93 ? C14 30R 801 A 1 
HETATM 12 C C15 30R . . . B 2 9.267 21.798 28.668 1 59.41 ? C15 30R 801 A 1 
HETATM 13 C C17 30R . . . B 2 5.879 19.709 30.329 1 69.83 ? C17 30R 801 A 1 
HETATM 14 C C18 30R . . . B 2 9.631 17.796 27.081 1 63.5 ? C18 30R 801 A 1 
HETATM 15 C C19 30R . . . B 2 8.317 17.206 26.592 1 64.54 ? C19 30R 801 A 1 
HETATM 16 C C20 30R . . . B 2 8.048 16.945 25.245 1 61.66 ? C20 30R 801 A 1 
HETATM 17 C C21 30R . . . B 2 6.82 16.37 24.888 1 67.34 ? C21 30R 801 A 1 
HETATM 18 C C22 30R . . . B 2 5.875 16.045 25.873 1 71.43 ? C22 30R 801 A 1 
HETATM 19 C C23 30R . . . B 2 6.155 16.295 27.215 1 65.89 ? C23 30R 801 A 1 
HETATM 20 C C24 30R . . . B 2 7.373 16.865 27.569 1 64 ? C24 30R 801 A 1 
HETATM 21 C C28 30R . . . B 2 12.104 17.855 25.979 1 52.63 ? C28 30R 801 A 1 
HETATM 22 N N6 30R . . . B 2 10.083 19.144 26.7 1 71.75 ? N6 30R 801 A 1 
HETATM 23 O O5 30R . . . B 2 13.937 20.275 29.338 1 41.3 ? O5 30R 801 A 1 
HETATM 24 S S7 30R . . . B 2 9.136 20.4 26.457 1 89.71 ? S7 30R 801 A 1 
HETATM 25 O O8 30R . . . B 2 7.967 20.198 25.603 1 68.2 ? O8 30R 801 A 1 
HETATM 26 O O9 30R . . . B 2 9.868 21.495 25.86 1 65.47 ? O9 30R 801 A 1 
HETATM 27 F F16 30R . . . B 2 7.252 21.721 31.705 1 70.89 ? F16 30R 801 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           239 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           27 
#