data_4PL7
#
_model_server_result.job_id            G0ysech2Qv2aewjy1zfrsg 
_model_server_result.datetime_utc      '2024-11-25 22:35:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4pl7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":502}' 
#
_entry.id    4PL7 
#
_exptl.entry_id    4PL7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          116.21 
_cell.angle_gamma         90 
_cell.entry_id            4PL7 
_cell.length_a            56.508 
_cell.length_b            139.495 
_cell.length_c            56.485 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4PL7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 C O2G ATP . A ATP 501 1_555 D CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? 
metalc ? metalc2 C O1B ATP . A ATP 501 1_555 D CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? 
metalc ? metalc3 D CA CA . A CA 502 1_555 G O HOH . A HOH 625 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? 
metalc ? metalc4 D CA CA . A CA 502 1_555 G O HOH . A HOH 626 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? 
metalc ? metalc5 D CA CA . A CA 502 1_555 G O HOH . A HOH 627 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? 
metalc ? metalc6 D CA CA . A CA 502 1_555 G O HOH . A HOH 628 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? 
metalc ? metalc7 D CA CA . A CA 502 1_555 G O HOH . A HOH 629 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? 
metalc ? metalc8 E O2G ATP . B ATP 501 1_555 F CA CA . B CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? 
metalc ? metalc9 E O1B ATP . B ATP 501 1_555 F CA CA . B CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? 
metalc ? metalc10 F CA CA . B CA 502 1_555 H O HOH . B HOH 625 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? 
metalc ? metalc11 F CA CA . B CA 502 1_555 H O HOH . B HOH 626 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? 
metalc ? metalc12 F CA CA . B CA 502 1_555 H O HOH . B HOH 627 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? 
metalc ? metalc13 F CA CA . B CA 502 1_555 H O HOH . B HOH 628 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? 
metalc ? metalc14 F CA CA . B CA 502 1_555 H O HOH . B HOH 629 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4PL7 
_atom_sites.fract_transf_matrix[1][1]    0.017697 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.008712 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007169 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019733 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ATP A 1 501 451 ATP ATP . 
D 3 CA A 1 502 452 CA CA . 
E 2 ATP B 1 501 451 ATP ATP . 
F 3 CA B 1 502 452 CA CA . 
G 4 HOH A 1 601 100 HOH HOH . 
G 4 HOH A 2 602 165 HOH HOH . 
G 4 HOH A 3 603 60 HOH HOH . 
G 4 HOH A 4 604 47 HOH HOH . 
G 4 HOH A 5 605 162 HOH HOH . 
G 4 HOH A 6 606 30 HOH HOH . 
G 4 HOH A 7 607 102 HOH HOH . 
G 4 HOH A 8 608 67 HOH HOH . 
G 4 HOH A 9 609 48 HOH HOH . 
G 4 HOH A 10 610 146 HOH HOH . 
G 4 HOH A 11 611 134 HOH HOH . 
G 4 HOH A 12 612 61 HOH HOH . 
G 4 HOH A 13 613 65 HOH HOH . 
G 4 HOH A 14 614 210 HOH HOH . 
G 4 HOH A 15 615 216 HOH HOH . 
G 4 HOH A 16 616 169 HOH HOH . 
G 4 HOH A 17 617 144 HOH HOH . 
G 4 HOH A 18 618 151 HOH HOH . 
G 4 HOH A 19 619 150 HOH HOH . 
G 4 HOH A 20 620 106 HOH HOH . 
G 4 HOH A 21 621 63 HOH HOH . 
G 4 HOH A 22 622 79 HOH HOH . 
G 4 HOH A 23 623 220 HOH HOH . 
G 4 HOH A 24 624 114 HOH HOH . 
G 4 HOH A 25 625 1 HOH HOH . 
G 4 HOH A 26 626 2 HOH HOH . 
G 4 HOH A 27 627 3 HOH HOH . 
G 4 HOH A 28 628 4 HOH HOH . 
G 4 HOH A 29 629 5 HOH HOH . 
G 4 HOH A 30 630 14 HOH HOH . 
G 4 HOH A 31 631 16 HOH HOH . 
G 4 HOH A 32 632 18 HOH HOH . 
G 4 HOH A 33 633 25 HOH HOH . 
G 4 HOH A 34 634 27 HOH HOH . 
G 4 HOH A 35 635 28 HOH HOH . 
G 4 HOH A 36 636 31 HOH HOH . 
G 4 HOH A 37 637 35 HOH HOH . 
G 4 HOH A 38 638 36 HOH HOH . 
G 4 HOH A 39 639 37 HOH HOH . 
G 4 HOH A 40 640 38 HOH HOH . 
G 4 HOH A 41 641 46 HOH HOH . 
G 4 HOH A 42 642 50 HOH HOH . 
G 4 HOH A 43 643 51 HOH HOH . 
G 4 HOH A 44 644 52 HOH HOH . 
G 4 HOH A 45 645 55 HOH HOH . 
G 4 HOH A 46 646 56 HOH HOH . 
G 4 HOH A 47 647 64 HOH HOH . 
G 4 HOH A 48 648 68 HOH HOH . 
G 4 HOH A 49 649 69 HOH HOH . 
G 4 HOH A 50 650 70 HOH HOH . 
G 4 HOH A 51 651 71 HOH HOH . 
G 4 HOH A 52 652 73 HOH HOH . 
G 4 HOH A 53 653 77 HOH HOH . 
G 4 HOH A 54 654 81 HOH HOH . 
G 4 HOH A 55 655 82 HOH HOH . 
G 4 HOH A 56 656 86 HOH HOH . 
G 4 HOH A 57 657 87 HOH HOH . 
G 4 HOH A 58 658 88 HOH HOH . 
G 4 HOH A 59 659 89 HOH HOH . 
G 4 HOH A 60 660 91 HOH HOH . 
G 4 HOH A 61 661 96 HOH HOH . 
G 4 HOH A 62 662 97 HOH HOH . 
G 4 HOH A 63 663 103 HOH HOH . 
G 4 HOH A 64 664 105 HOH HOH . 
G 4 HOH A 65 665 108 HOH HOH . 
G 4 HOH A 66 666 110 HOH HOH . 
G 4 HOH A 67 667 115 HOH HOH . 
G 4 HOH A 68 668 120 HOH HOH . 
G 4 HOH A 69 669 123 HOH HOH . 
G 4 HOH A 70 670 125 HOH HOH . 
G 4 HOH A 71 671 129 HOH HOH . 
G 4 HOH A 72 672 135 HOH HOH . 
G 4 HOH A 73 673 136 HOH HOH . 
G 4 HOH A 74 674 138 HOH HOH . 
G 4 HOH A 75 675 140 HOH HOH . 
G 4 HOH A 76 676 148 HOH HOH . 
G 4 HOH A 77 677 153 HOH HOH . 
G 4 HOH A 78 678 157 HOH HOH . 
G 4 HOH A 79 679 158 HOH HOH . 
G 4 HOH A 80 680 160 HOH HOH . 
G 4 HOH A 81 681 163 HOH HOH . 
G 4 HOH A 82 682 167 HOH HOH . 
G 4 HOH A 83 683 168 HOH HOH . 
G 4 HOH A 84 684 171 HOH HOH . 
G 4 HOH A 85 685 173 HOH HOH . 
G 4 HOH A 86 686 174 HOH HOH . 
G 4 HOH A 87 687 180 HOH HOH . 
G 4 HOH A 88 688 188 HOH HOH . 
G 4 HOH A 89 689 189 HOH HOH . 
G 4 HOH A 90 690 191 HOH HOH . 
G 4 HOH A 91 691 195 HOH HOH . 
G 4 HOH A 92 692 199 HOH HOH . 
G 4 HOH A 93 693 200 HOH HOH . 
G 4 HOH A 94 694 202 HOH HOH . 
G 4 HOH A 95 695 203 HOH HOH . 
G 4 HOH A 96 696 204 HOH HOH . 
G 4 HOH A 97 697 213 HOH HOH . 
G 4 HOH A 98 698 214 HOH HOH . 
G 4 HOH A 99 699 219 HOH HOH . 
H 4 HOH B 1 601 98 HOH HOH . 
H 4 HOH B 2 602 22 HOH HOH . 
H 4 HOH B 3 603 43 HOH HOH . 
H 4 HOH B 4 604 74 HOH HOH . 
H 4 HOH B 5 605 215 HOH HOH . 
H 4 HOH B 6 606 183 HOH HOH . 
H 4 HOH B 7 607 85 HOH HOH . 
H 4 HOH B 8 608 45 HOH HOH . 
H 4 HOH B 9 609 139 HOH HOH . 
H 4 HOH B 10 610 222 HOH HOH . 
H 4 HOH B 11 611 196 HOH HOH . 
H 4 HOH B 12 612 155 HOH HOH . 
H 4 HOH B 13 613 159 HOH HOH . 
H 4 HOH B 14 614 132 HOH HOH . 
H 4 HOH B 15 615 116 HOH HOH . 
H 4 HOH B 16 616 44 HOH HOH . 
H 4 HOH B 17 617 124 HOH HOH . 
H 4 HOH B 18 618 93 HOH HOH . 
H 4 HOH B 19 619 72 HOH HOH . 
H 4 HOH B 20 620 218 HOH HOH . 
H 4 HOH B 21 621 182 HOH HOH . 
H 4 HOH B 22 622 58 HOH HOH . 
H 4 HOH B 23 623 185 HOH HOH . 
H 4 HOH B 24 624 99 HOH HOH . 
H 4 HOH B 25 625 6 HOH HOH . 
H 4 HOH B 26 626 7 HOH HOH . 
H 4 HOH B 27 627 8 HOH HOH . 
H 4 HOH B 28 628 9 HOH HOH . 
H 4 HOH B 29 629 10 HOH HOH . 
H 4 HOH B 30 630 11 HOH HOH . 
H 4 HOH B 31 631 12 HOH HOH . 
H 4 HOH B 32 632 13 HOH HOH . 
H 4 HOH B 33 633 15 HOH HOH . 
H 4 HOH B 34 634 17 HOH HOH . 
H 4 HOH B 35 635 19 HOH HOH . 
H 4 HOH B 36 636 20 HOH HOH . 
H 4 HOH B 37 637 21 HOH HOH . 
H 4 HOH B 38 638 23 HOH HOH . 
H 4 HOH B 39 639 24 HOH HOH . 
H 4 HOH B 40 640 26 HOH HOH . 
H 4 HOH B 41 641 29 HOH HOH . 
H 4 HOH B 42 642 32 HOH HOH . 
H 4 HOH B 43 643 33 HOH HOH . 
H 4 HOH B 44 644 34 HOH HOH . 
H 4 HOH B 45 645 39 HOH HOH . 
H 4 HOH B 46 646 40 HOH HOH . 
H 4 HOH B 47 647 41 HOH HOH . 
H 4 HOH B 48 648 42 HOH HOH . 
H 4 HOH B 49 649 49 HOH HOH . 
H 4 HOH B 50 650 53 HOH HOH . 
H 4 HOH B 51 651 54 HOH HOH . 
H 4 HOH B 52 652 57 HOH HOH . 
H 4 HOH B 53 653 59 HOH HOH . 
H 4 HOH B 54 654 62 HOH HOH . 
H 4 HOH B 55 655 66 HOH HOH . 
H 4 HOH B 56 656 75 HOH HOH . 
H 4 HOH B 57 657 76 HOH HOH . 
H 4 HOH B 58 658 78 HOH HOH . 
H 4 HOH B 59 659 80 HOH HOH . 
H 4 HOH B 60 660 83 HOH HOH . 
H 4 HOH B 61 661 84 HOH HOH . 
H 4 HOH B 62 662 90 HOH HOH . 
H 4 HOH B 63 663 92 HOH HOH . 
H 4 HOH B 64 664 94 HOH HOH . 
H 4 HOH B 65 665 95 HOH HOH . 
H 4 HOH B 66 666 101 HOH HOH . 
H 4 HOH B 67 667 104 HOH HOH . 
H 4 HOH B 68 668 107 HOH HOH . 
H 4 HOH B 69 669 109 HOH HOH . 
H 4 HOH B 70 670 111 HOH HOH . 
H 4 HOH B 71 671 112 HOH HOH . 
H 4 HOH B 72 672 113 HOH HOH . 
H 4 HOH B 73 673 117 HOH HOH . 
H 4 HOH B 74 674 118 HOH HOH . 
H 4 HOH B 75 675 119 HOH HOH . 
H 4 HOH B 76 676 121 HOH HOH . 
H 4 HOH B 77 677 122 HOH HOH . 
H 4 HOH B 78 678 126 HOH HOH . 
H 4 HOH B 79 679 127 HOH HOH . 
H 4 HOH B 80 680 128 HOH HOH . 
H 4 HOH B 81 681 130 HOH HOH . 
H 4 HOH B 82 682 131 HOH HOH . 
H 4 HOH B 83 683 133 HOH HOH . 
H 4 HOH B 84 684 137 HOH HOH . 
H 4 HOH B 85 685 141 HOH HOH . 
H 4 HOH B 86 686 142 HOH HOH . 
H 4 HOH B 87 687 143 HOH HOH . 
H 4 HOH B 88 688 145 HOH HOH . 
H 4 HOH B 89 689 147 HOH HOH . 
H 4 HOH B 90 690 149 HOH HOH . 
H 4 HOH B 91 691 152 HOH HOH . 
H 4 HOH B 92 692 154 HOH HOH . 
H 4 HOH B 93 693 156 HOH HOH . 
H 4 HOH B 94 694 161 HOH HOH . 
H 4 HOH B 95 695 164 HOH HOH . 
H 4 HOH B 96 696 166 HOH HOH . 
H 4 HOH B 97 697 170 HOH HOH . 
H 4 HOH B 98 698 172 HOH HOH . 
H 4 HOH B 99 699 175 HOH HOH . 
H 4 HOH B 100 700 176 HOH HOH . 
H 4 HOH B 101 701 177 HOH HOH . 
H 4 HOH B 102 702 178 HOH HOH . 
H 4 HOH B 103 703 179 HOH HOH . 
H 4 HOH B 104 704 181 HOH HOH . 
H 4 HOH B 105 705 184 HOH HOH . 
H 4 HOH B 106 706 186 HOH HOH . 
H 4 HOH B 107 707 187 HOH HOH . 
H 4 HOH B 108 708 190 HOH HOH . 
H 4 HOH B 109 709 192 HOH HOH . 
H 4 HOH B 110 710 193 HOH HOH . 
H 4 HOH B 111 711 194 HOH HOH . 
H 4 HOH B 112 712 197 HOH HOH . 
H 4 HOH B 113 713 198 HOH HOH . 
H 4 HOH B 114 714 201 HOH HOH . 
H 4 HOH B 115 715 205 HOH HOH . 
H 4 HOH B 116 716 206 HOH HOH . 
H 4 HOH B 117 717 207 HOH HOH . 
H 4 HOH B 118 718 208 HOH HOH . 
H 4 HOH B 119 719 209 HOH HOH . 
H 4 HOH B 120 720 211 HOH HOH . 
H 4 HOH B 121 721 212 HOH HOH . 
H 4 HOH B 122 722 217 HOH HOH . 
H 4 HOH B 123 723 221 HOH HOH . 
H 4 HOH B 124 724 223 HOH HOH . 
H 4 HOH B 125 725 224 HOH HOH . 
H 4 HOH B 126 726 225 HOH HOH . 
H 4 HOH B 127 727 226 HOH HOH . 
H 4 HOH B 128 728 227 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               4.146 
_atom_site.Cartn_y               -8.581 
_atom_site.Cartn_z               14.787 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        27.54 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           502 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           301 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#