data_4PLO # _model_server_result.job_id oEwvhqr7bAswhWHTUna4Qw _model_server_result.datetime_utc '2024-11-09 02:03:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4plo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":509}' # _entry.id 4PLO # _exptl.entry_id 4PLO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4PLO _cell.length_a 49.478 _cell.length_b 72.939 _cell.length_c 285.159 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PLO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_645 x+1,y-1,z 1 0 0 0 1 0 0 0 1 49.478 -72.939 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id K _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 18 A CYS 43 1_555 B SG CYS 28 A CYS 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? disulf ? disulf2 B SG CYS 47 A CYS 72 1_555 B SG CYS 71 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf3 B SG CYS 55 A CYS 80 1_555 B SG CYS 68 A CYS 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf4 B SG CYS 96 A CYS 121 1_555 B SG CYS 129 A CYS 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf5 B SG CYS 158 A CYS 183 1_555 B SG CYS 180 A CYS 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf6 B SG CYS 262 A CYS 287 1_555 B SG CYS 271 A CYS 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? disulf ? disulf7 B SG CYS 264 A CYS 289 1_555 B SG CYS 281 A CYS 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf8 B SG CYS 283 A CYS 308 1_555 B SG CYS 292 A CYS 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf9 B SG CYS 295 A CYS 320 1_555 B SG CYS 315 A CYS 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf10 B SG CYS 318 A CYS 343 1_555 B SG CYS 327 A CYS 352 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf11 B SG CYS 320 A CYS 345 1_555 B SG CYS 345 A CYS 370 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf12 B SG CYS 348 A CYS 373 1_555 B SG CYS 357 A CYS 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf13 B SG CYS 360 A CYS 385 1_555 B SG CYS 378 A CYS 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf14 B SG CYS 381 A CYS 406 1_555 B SG CYS 393 A CYS 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf15 B SG CYS 383 A CYS 408 1_555 B SG CYS 400 A CYS 425 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf16 B SG CYS 402 A CYS 427 1_555 B SG CYS 411 A CYS 436 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf17 B SG CYS 414 A CYS 439 1_555 B SG CYS 428 A CYS 453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? covale ? covale1 B ND2 ASN 72 A ASN 97 1_555 C C1 NAG . A NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? covale ? covale2 B ND2 ASN 93 A ASN 118 1_555 D C1 NAG . A NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.476 ? covale ? covale3 B ND2 ASN 108 A ASN 133 1_555 E C1 NAG . A NAG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? metalc ? metalc1 B O PHE 84 A PHE 109 1_555 K CA CA . A CA 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.812 ? metalc ? metalc2 B OD1 ASP 87 A ASP 112 1_555 K CA CA . A CA 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc3 B O THR 95 A THR 120 1_555 K CA CA . A CA 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.834 ? metalc ? metalc4 B OG1 THR 95 A THR 120 1_555 K CA CA . A CA 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.86 ? metalc ? metalc5 B O SER 254 A SER 279 1_555 K CA CA . A CA 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc6 K CA CA . A CA 509 1_555 M O HOH . A HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.501 ? metalc ? metalc7 K CA CA . A CA 509 1_555 M O HOH . A HOH 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4PLO _atom_sites.fract_transf_matrix[1][1] 0.020211 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01371 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003507 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG A 1 501 971 NAG NAG . D 3 NAG A 1 502 1181 NAG NAG . E 3 NAG A 1 503 1331 NAG NAG . F 4 SO4 A 1 504 1 SO4 SO4 . G 4 SO4 A 1 505 2 SO4 SO4 . H 4 SO4 A 1 506 3 SO4 SO4 . I 4 SO4 A 1 507 4 SO4 SO4 . J 4 SO4 A 1 508 5 SO4 SO4 . K 5 CA A 1 509 1 CA CA . L 6 HOH B 1 1001 66 HOH HOH . L 6 HOH B 2 1002 34 HOH HOH . L 6 HOH B 3 1003 16 HOH HOH . L 6 HOH B 4 1004 9 HOH HOH . L 6 HOH B 5 1005 15 HOH HOH . L 6 HOH B 6 1006 20 HOH HOH . L 6 HOH B 7 1007 30 HOH HOH . L 6 HOH B 8 1008 32 HOH HOH . L 6 HOH B 9 1009 38 HOH HOH . L 6 HOH B 10 1010 40 HOH HOH . L 6 HOH B 11 1011 46 HOH HOH . L 6 HOH B 12 1012 53 HOH HOH . L 6 HOH B 13 1013 62 HOH HOH . L 6 HOH B 14 1014 64 HOH HOH . L 6 HOH B 15 1015 65 HOH HOH . L 6 HOH B 16 1016 67 HOH HOH . M 6 HOH A 1 601 33 HOH HOH . M 6 HOH A 2 602 2 HOH HOH . M 6 HOH A 3 603 21 HOH HOH . M 6 HOH A 4 604 61 HOH HOH . M 6 HOH A 5 605 19 HOH HOH . M 6 HOH A 6 606 37 HOH HOH . M 6 HOH A 7 607 1 HOH HOH . M 6 HOH A 8 608 3 HOH HOH . M 6 HOH A 9 609 4 HOH HOH . M 6 HOH A 10 610 5 HOH HOH . M 6 HOH A 11 611 6 HOH HOH . M 6 HOH A 12 612 7 HOH HOH . M 6 HOH A 13 613 8 HOH HOH . M 6 HOH A 14 614 10 HOH HOH . M 6 HOH A 15 615 11 HOH HOH . M 6 HOH A 16 616 12 HOH HOH . M 6 HOH A 17 617 13 HOH HOH . M 6 HOH A 18 618 14 HOH HOH . M 6 HOH A 19 619 17 HOH HOH . M 6 HOH A 20 620 18 HOH HOH . M 6 HOH A 21 621 22 HOH HOH . M 6 HOH A 22 622 23 HOH HOH . M 6 HOH A 23 623 24 HOH HOH . M 6 HOH A 24 624 25 HOH HOH . M 6 HOH A 25 625 26 HOH HOH . M 6 HOH A 26 626 27 HOH HOH . M 6 HOH A 27 627 28 HOH HOH . M 6 HOH A 28 628 29 HOH HOH . M 6 HOH A 29 629 31 HOH HOH . M 6 HOH A 30 630 35 HOH HOH . M 6 HOH A 31 631 36 HOH HOH . M 6 HOH A 32 632 39 HOH HOH . M 6 HOH A 33 633 41 HOH HOH . M 6 HOH A 34 634 42 HOH HOH . M 6 HOH A 35 635 43 HOH HOH . M 6 HOH A 36 636 44 HOH HOH . M 6 HOH A 37 637 45 HOH HOH . M 6 HOH A 38 638 47 HOH HOH . M 6 HOH A 39 639 48 HOH HOH . M 6 HOH A 40 640 49 HOH HOH . M 6 HOH A 41 641 50 HOH HOH . M 6 HOH A 42 642 51 HOH HOH . M 6 HOH A 43 643 52 HOH HOH . M 6 HOH A 44 644 54 HOH HOH . M 6 HOH A 45 645 55 HOH HOH . M 6 HOH A 46 646 56 HOH HOH . M 6 HOH A 47 647 57 HOH HOH . M 6 HOH A 48 648 58 HOH HOH . M 6 HOH A 49 649 59 HOH HOH . M 6 HOH A 50 650 60 HOH HOH . M 6 HOH A 51 651 63 HOH HOH . M 6 HOH A 52 652 68 HOH HOH . M 6 HOH A 53 653 69 HOH HOH . M 6 HOH A 54 654 70 HOH HOH . M 6 HOH A 55 655 71 HOH HOH . M 6 HOH A 56 656 72 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 5 _atom_site.Cartn_x 2.258 _atom_site.Cartn_y 0.73 _atom_site.Cartn_z -66.499 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15.1 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 509 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #