data_4PN9
#
_model_server_result.job_id            82wLqWp0Tj-Wc8YNqb8Q2Q 
_model_server_result.datetime_utc      '2025-06-21 02:00:23' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4pn9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":101}' 
#
_entry.id    4PN9 
#
_exptl.entry_id    4PN9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              238.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4PN9 
_cell.length_a            59.32 
_cell.length_b            125.53 
_cell.length_c            58.15 
_cell.Z_PDB               48 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4PN9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    Hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ACE 1 A ACE 0 1_555 A N GLY 2 A GLY 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? 
covale ? covale2 B C ACE 1 B ACE 0 1_555 B N GLY 2 B GLY 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale3 C C ACE 1 C ACE 0 1_555 C N GLY 2 C GLY 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale4 D C ACE 1 D ACE 0 1_555 D N GLY 2 D GLY 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale5 F C ACE 1 F ACE 0 1_555 F N GLY 2 F GLY 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
#
_chem_comp.formula           'C8 H18 N2 O4 S' 
_chem_comp.formula_weight    238.305 
_chem_comp.id                EPE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEPES 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 EPE sing 19 n n 
N1 C6 EPE sing 20 n n 
N1 C9 EPE sing 21 n n 
C2 C3 EPE sing 22 n n 
C2 H21 EPE sing 23 n n 
C2 H22 EPE sing 24 n n 
C3 N4 EPE sing 25 n n 
C3 H31 EPE sing 26 n n 
C3 H32 EPE sing 27 n n 
N4 C5 EPE sing 28 n n 
N4 C7 EPE sing 29 n n 
C5 C6 EPE sing 30 n n 
C5 H51 EPE sing 31 n n 
C5 H52 EPE sing 32 n n 
C6 H61 EPE sing 33 n n 
C6 H62 EPE sing 34 n n 
C7 C8 EPE sing 35 n n 
C7 H71 EPE sing 36 n n 
C7 H72 EPE sing 37 n n 
C8 O8 EPE sing 38 n n 
C8 H81 EPE sing 39 n n 
C8 H82 EPE sing 40 n n 
O8 HO8 EPE sing 41 n n 
C9 C10 EPE sing 42 n n 
C9 H91 EPE sing 43 n n 
C9 H92 EPE sing 44 n n 
C10 S EPE sing 45 n n 
C10 H101 EPE sing 46 n n 
C10 H102 EPE sing 47 n n 
S O1S EPE doub 48 n n 
S O2S EPE doub 49 n n 
S O3S EPE sing 50 n n 
O3S HOS3 EPE sing 51 n n 
#
_atom_sites.entry_id                     4PN9 
_atom_sites.fract_transf_matrix[1][1]    0.016858 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007966 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017197 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 EPE E 1 101 1 EPE EPE . 
H 3 HOH A 1 101 14 HOH HOH . 
H 3 HOH A 2 102 17 HOH HOH . 
H 3 HOH A 3 103 2 HOH HOH . 
H 3 HOH A 4 104 19 HOH HOH . 
H 3 HOH A 5 105 78 HOH HOH . 
H 3 HOH A 6 106 20 HOH HOH . 
H 3 HOH A 7 107 18 HOH HOH . 
H 3 HOH A 8 108 39 HOH HOH . 
H 3 HOH A 9 109 71 HOH HOH . 
H 3 HOH A 10 110 1 HOH HOH . 
H 3 HOH A 11 111 3 HOH HOH . 
H 3 HOH A 12 112 16 HOH HOH . 
H 3 HOH A 13 113 58 HOH HOH . 
H 3 HOH A 14 114 30 HOH HOH . 
I 3 HOH B 1 101 61 HOH HOH . 
I 3 HOH B 2 102 40 HOH HOH . 
I 3 HOH B 3 103 74 HOH HOH . 
I 3 HOH B 4 104 42 HOH HOH . 
I 3 HOH B 5 105 6 HOH HOH . 
I 3 HOH B 6 106 5 HOH HOH . 
I 3 HOH B 7 107 59 HOH HOH . 
I 3 HOH B 8 108 73 HOH HOH . 
I 3 HOH B 9 109 22 HOH HOH . 
J 3 HOH C 1 101 4 HOH HOH . 
J 3 HOH C 2 102 7 HOH HOH . 
J 3 HOH C 3 103 62 HOH HOH . 
J 3 HOH C 4 104 65 HOH HOH . 
J 3 HOH C 5 105 51 HOH HOH . 
J 3 HOH C 6 106 37 HOH HOH . 
J 3 HOH C 7 107 23 HOH HOH . 
J 3 HOH C 8 108 41 HOH HOH . 
J 3 HOH C 9 109 63 HOH HOH . 
J 3 HOH C 10 110 77 HOH HOH . 
J 3 HOH C 11 111 29 HOH HOH . 
J 3 HOH C 12 112 33 HOH HOH . 
J 3 HOH C 13 113 34 HOH HOH . 
K 3 HOH D 1 101 9 HOH HOH . 
K 3 HOH D 2 102 44 HOH HOH . 
K 3 HOH D 3 103 53 HOH HOH . 
K 3 HOH D 4 104 49 HOH HOH . 
K 3 HOH D 5 105 52 HOH HOH . 
K 3 HOH D 6 106 45 HOH HOH . 
K 3 HOH D 7 107 67 HOH HOH . 
K 3 HOH D 8 108 28 HOH HOH . 
L 3 HOH E 1 201 11 HOH HOH . 
L 3 HOH E 2 202 24 HOH HOH . 
L 3 HOH E 3 203 8 HOH HOH . 
L 3 HOH E 4 204 54 HOH HOH . 
L 3 HOH E 5 205 10 HOH HOH . 
L 3 HOH E 6 206 43 HOH HOH . 
L 3 HOH E 7 207 68 HOH HOH . 
L 3 HOH E 8 208 25 HOH HOH . 
L 3 HOH E 9 209 76 HOH HOH . 
L 3 HOH E 10 210 75 HOH HOH . 
L 3 HOH E 11 211 35 HOH HOH . 
L 3 HOH E 12 212 32 HOH HOH . 
L 3 HOH E 13 213 27 HOH HOH . 
M 3 HOH F 1 101 38 HOH HOH . 
M 3 HOH F 2 102 72 HOH HOH . 
M 3 HOH F 3 103 12 HOH HOH . 
M 3 HOH F 4 104 21 HOH HOH . 
M 3 HOH F 5 105 13 HOH HOH . 
M 3 HOH F 6 106 48 HOH HOH . 
M 3 HOH F 7 107 47 HOH HOH . 
M 3 HOH F 8 108 60 HOH HOH . 
M 3 HOH F 9 109 56 HOH HOH . 
M 3 HOH F 10 110 50 HOH HOH . 
M 3 HOH F 11 111 31 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 EPE . . . G 2 80.852 283.923 47.491 1 110.52 ? N1 EPE 101 E 1 
HETATM 2 C C2 EPE . . . G 2 81.271 282.87 46.547 1 106.83 ? C2 EPE 101 E 1 
HETATM 3 C C3 EPE . . . G 2 81.205 281.464 47.131 1 104.51 ? C3 EPE 101 E 1 
HETATM 4 N N4 EPE . . . G 2 81.848 281.373 48.429 1 102.06 ? N4 EPE 101 E 1 
HETATM 5 C C5 EPE . . . G 2 81.747 282.521 49.311 1 104.55 ? C5 EPE 101 E 1 
HETATM 6 C C6 EPE . . . G 2 80.607 283.431 48.861 1 107.42 ? C6 EPE 101 E 1 
HETATM 7 C C7 EPE . . . G 2 82.069 280.063 49.006 1 95.48 ? C7 EPE 101 E 1 
HETATM 8 C C8 EPE . . . G 2 82.506 279.035 47.972 1 90.96 ? C8 EPE 101 E 1 
HETATM 9 O O8 EPE . . . G 2 82.127 277.755 48.421 1 87.29 ? O8 EPE 101 E 1 
HETATM 10 C C9 EPE . . . G 2 81.903 284.95 47.535 1 114.97 ? C9 EPE 101 E 1 
HETATM 11 C C10 EPE . . . G 2 81.78 285.914 46.364 1 115.81 ? C10 EPE 101 E 1 
HETATM 12 S S EPE . . . G 2 81.989 287.629 46.899 1 141.73 ? S EPE 101 E 1 
HETATM 13 O O1S EPE . . . G 2 80.739 288.36 46.718 1 141.78 ? O1S EPE 101 E 1 
HETATM 14 O O2S EPE . . . G 2 83.051 288.265 46.123 1 141.84 ? O2S EPE 101 E 1 
HETATM 15 O O3S EPE . . . G 2 82.342 287.634 48.314 1 140.86 ? O3S EPE 101 E 1 
#
_model_server_stats.io_time_ms              60 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           15 
#