data_4PNP # _model_server_result.job_id -em50lacaFIQ2Z5DtImunw _model_server_result.datetime_utc '2024-11-15 10:55:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4pnp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":291}' # _entry.id 4PNP # _exptl.entry_id 4PNP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4PNP _cell.length_a 92.72 _cell.length_b 92.72 _cell.length_c 92.72 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PNP _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 3' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_656 -z+1,x+1/2,-y+3/2 0 0 -1 1 0 0 0 -1 0 92.72 46.36 139.08 3 'crystal symmetry operation' 11_466 y-1/2,-z+3/2,-x+1 0 1 0 0 0 -1 -1 0 0 -46.36 139.08 92.72 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 4PNP _atom_sites.fract_transf_matrix[1][1] 0.010785 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010785 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010785 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 291 291 PO4 PO4 . C 3 HOH A 1 292 292 HOH HOH . C 3 HOH A 2 293 293 HOH HOH . C 3 HOH A 3 294 294 HOH HOH . C 3 HOH A 4 295 295 HOH HOH . C 3 HOH A 5 296 296 HOH HOH . C 3 HOH A 6 297 297 HOH HOH . C 3 HOH A 7 298 298 HOH HOH . C 3 HOH A 8 299 299 HOH HOH . C 3 HOH A 9 300 300 HOH HOH . C 3 HOH A 10 301 301 HOH HOH . C 3 HOH A 11 302 302 HOH HOH . C 3 HOH A 12 303 303 HOH HOH . C 3 HOH A 13 304 304 HOH HOH . C 3 HOH A 14 305 305 HOH HOH . C 3 HOH A 15 306 306 HOH HOH . C 3 HOH A 16 307 307 HOH HOH . C 3 HOH A 17 308 308 HOH HOH . C 3 HOH A 18 309 309 HOH HOH . C 3 HOH A 19 310 310 HOH HOH . C 3 HOH A 20 311 311 HOH HOH . C 3 HOH A 21 312 312 HOH HOH . C 3 HOH A 22 313 313 HOH HOH . C 3 HOH A 23 314 314 HOH HOH . C 3 HOH A 24 315 315 HOH HOH . C 3 HOH A 25 316 316 HOH HOH . C 3 HOH A 26 317 317 HOH HOH . C 3 HOH A 27 318 318 HOH HOH . C 3 HOH A 28 319 319 HOH HOH . C 3 HOH A 29 320 320 HOH HOH . C 3 HOH A 30 321 321 HOH HOH . C 3 HOH A 31 322 322 HOH HOH . C 3 HOH A 32 323 323 HOH HOH . C 3 HOH A 33 324 324 HOH HOH . C 3 HOH A 34 325 325 HOH HOH . C 3 HOH A 35 326 326 HOH HOH . C 3 HOH A 36 327 327 HOH HOH . C 3 HOH A 37 328 328 HOH HOH . C 3 HOH A 38 329 329 HOH HOH . C 3 HOH A 39 330 330 HOH HOH . C 3 HOH A 40 331 331 HOH HOH . C 3 HOH A 41 332 332 HOH HOH . C 3 HOH A 42 333 333 HOH HOH . C 3 HOH A 43 334 334 HOH HOH . C 3 HOH A 44 335 335 HOH HOH . C 3 HOH A 45 336 336 HOH HOH . C 3 HOH A 46 337 337 HOH HOH . C 3 HOH A 47 338 338 HOH HOH . C 3 HOH A 48 339 339 HOH HOH . C 3 HOH A 49 340 340 HOH HOH . C 3 HOH A 50 341 341 HOH HOH . C 3 HOH A 51 342 342 HOH HOH . C 3 HOH A 52 343 343 HOH HOH . C 3 HOH A 53 344 344 HOH HOH . C 3 HOH A 54 345 345 HOH HOH . C 3 HOH A 55 346 346 HOH HOH . C 3 HOH A 56 347 347 HOH HOH . C 3 HOH A 57 348 348 HOH HOH . C 3 HOH A 58 349 349 HOH HOH . C 3 HOH A 59 350 350 HOH HOH . C 3 HOH A 60 351 351 HOH HOH . C 3 HOH A 61 352 352 HOH HOH . C 3 HOH A 62 353 353 HOH HOH . C 3 HOH A 63 354 354 HOH HOH . C 3 HOH A 64 355 355 HOH HOH . C 3 HOH A 65 356 356 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . B 2 16.527 88.803 72.91 1 15.08 ? P PO4 291 A 1 HETATM 2 O O1 PO4 . . . B 2 17.378 88.949 74.218 1 19.62 ? O1 PO4 291 A 1 HETATM 3 O O2 PO4 . . . B 2 16.118 90.262 72.395 1 17.13 ? O2 PO4 291 A 1 HETATM 4 O O3 PO4 . . . B 2 17.333 88.035 71.801 1 16.3 ? O3 PO4 291 A 1 HETATM 5 O O4 PO4 . . . B 2 15.202 87.982 73.289 1 17.23 ? O4 PO4 291 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #