data_4POH
#
_model_server_result.job_id            GaZA8-a4y6aGWkyAKPsvFw 
_model_server_result.datetime_utc      '2025-04-20 15:47:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4poh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    4POH 
#
_exptl.entry_id    4POH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              308.414 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2E,4E,6Z,8E)-3,7-dimethyl-8-(8-methyl-3,4-dihydronaphthalen-1(2H)-ylidene)octa-2,4,6-trienoic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4POH 
_cell.length_a            66.25 
_cell.length_b            66.25 
_cell.length_c            110.67 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4POH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_775 -y+2,-x+2,-z+1/2 0 -1 0 -1 0 0 0 0 -1 132.5 132.5 55.335 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C21 H24 O2' 
_chem_comp.formula_weight    308.414 
_chem_comp.id                2VR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2E,4E,6Z,8E)-3,7-dimethyl-8-(8-methyl-3,4-dihydronaphthalen-1(2H)-ylidene)octa-2,4,6-trienoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C19 C9 2VR sing 1 n n 
C10 C9 2VR doub 2 z n 
C10 C11 2VR sing 3 n n 
C9 C8 2VR sing 4 n n 
C12 C11 2VR doub 5 e n 
C12 C13 2VR sing 6 n n 
C14 C13 2VR doub 7 e n 
C14 C15 2VR sing 8 n n 
C2' C1' 2VR sing 9 n n 
C2' C7 2VR sing 10 n n 
C13 C20 2VR sing 11 n n 
O1 C15 2VR doub 12 n n 
C1' C18 2VR sing 13 n n 
C15 O2 2VR sing 14 n n 
C8 C7 2VR doub 15 e n 
C7 C6 2VR sing 16 n n 
C18 C5 2VR sing 17 n n 
C6 C5 2VR doub 18 n y 
C6 C1 2VR sing 19 n y 
C5 C4 2VR sing 20 n y 
C8' C1 2VR sing 21 n n 
C1 C2 2VR doub 22 n y 
C4 C3 2VR doub 23 n y 
C2 C3 2VR sing 24 n y 
C2' H1 2VR sing 25 n n 
C2' H2 2VR sing 26 n n 
C1' H3 2VR sing 27 n n 
C1' H4 2VR sing 28 n n 
C18 H5 2VR sing 29 n n 
C18 H6 2VR sing 30 n n 
C4 H7 2VR sing 31 n n 
C3 H8 2VR sing 32 n n 
C2 H9 2VR sing 33 n n 
C8' H10 2VR sing 34 n n 
C8' H11 2VR sing 35 n n 
C8' H12 2VR sing 36 n n 
C8 H13 2VR sing 37 n n 
C19 H14 2VR sing 38 n n 
C19 H15 2VR sing 39 n n 
C19 H16 2VR sing 40 n n 
C10 H17 2VR sing 41 n n 
C11 H18 2VR sing 42 n n 
C12 H19 2VR sing 43 n n 
C20 H20 2VR sing 44 n n 
C20 H21 2VR sing 45 n n 
C20 H22 2VR sing 46 n n 
C14 H23 2VR sing 47 n n 
O2 H24 2VR sing 48 n n 
#
_atom_sites.entry_id                     4POH 
_atom_sites.fract_transf_matrix[1][1]    0.015094 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015094 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009036 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 2VR A 1 501 1 2VR 8ME . 
D 4 HOH A 1 601 501 HOH HOH . 
D 4 HOH A 2 602 502 HOH HOH . 
D 4 HOH A 3 603 503 HOH HOH . 
D 4 HOH A 4 604 504 HOH HOH . 
D 4 HOH A 5 605 505 HOH HOH . 
D 4 HOH A 6 606 506 HOH HOH . 
D 4 HOH A 7 607 507 HOH HOH . 
D 4 HOH A 8 608 508 HOH HOH . 
D 4 HOH A 9 609 509 HOH HOH . 
D 4 HOH A 10 610 511 HOH HOH . 
D 4 HOH A 11 611 512 HOH HOH . 
D 4 HOH A 12 612 513 HOH HOH . 
D 4 HOH A 13 613 515 HOH HOH . 
D 4 HOH A 14 614 517 HOH HOH . 
D 4 HOH A 15 615 518 HOH HOH . 
D 4 HOH A 16 616 519 HOH HOH . 
D 4 HOH A 17 617 521 HOH HOH . 
D 4 HOH A 18 618 522 HOH HOH . 
D 4 HOH A 19 619 523 HOH HOH . 
D 4 HOH A 20 620 524 HOH HOH . 
D 4 HOH A 21 621 525 HOH HOH . 
D 4 HOH A 22 622 528 HOH HOH . 
D 4 HOH A 23 623 529 HOH HOH . 
D 4 HOH A 24 624 530 HOH HOH . 
D 4 HOH A 25 625 532 HOH HOH . 
D 4 HOH A 26 626 533 HOH HOH . 
D 4 HOH A 27 627 535 HOH HOH . 
D 4 HOH A 28 628 536 HOH HOH . 
D 4 HOH A 29 629 539 HOH HOH . 
D 4 HOH A 30 630 540 HOH HOH . 
D 4 HOH A 31 631 541 HOH HOH . 
D 4 HOH A 32 632 542 HOH HOH . 
D 4 HOH A 33 633 543 HOH HOH . 
D 4 HOH A 34 634 545 HOH HOH . 
D 4 HOH A 35 635 546 HOH HOH . 
D 4 HOH A 36 636 548 HOH HOH . 
D 4 HOH A 37 637 549 HOH HOH . 
D 4 HOH A 38 638 554 HOH HOH . 
D 4 HOH A 39 639 555 HOH HOH . 
D 4 HOH A 40 640 556 HOH HOH . 
D 4 HOH A 41 641 557 HOH HOH . 
D 4 HOH A 42 642 558 HOH HOH . 
D 4 HOH A 43 643 559 HOH HOH . 
D 4 HOH A 44 644 561 HOH HOH . 
D 4 HOH A 45 645 563 HOH HOH . 
D 4 HOH A 46 646 564 HOH HOH . 
D 4 HOH A 47 647 565 HOH HOH . 
D 4 HOH A 48 648 567 HOH HOH . 
D 4 HOH A 49 649 569 HOH HOH . 
D 4 HOH A 50 650 570 HOH HOH . 
D 4 HOH A 51 651 571 HOH HOH . 
D 4 HOH A 52 652 573 HOH HOH . 
D 4 HOH A 53 653 574 HOH HOH . 
D 4 HOH A 54 654 575 HOH HOH . 
D 4 HOH A 55 655 576 HOH HOH . 
D 4 HOH A 56 656 577 HOH HOH . 
D 4 HOH A 57 657 578 HOH HOH . 
D 4 HOH A 58 658 581 HOH HOH . 
D 4 HOH A 59 659 582 HOH HOH . 
D 4 HOH A 60 660 583 HOH HOH . 
D 4 HOH A 61 661 585 HOH HOH . 
D 4 HOH A 62 662 586 HOH HOH . 
D 4 HOH A 63 663 587 HOH HOH . 
D 4 HOH A 64 664 588 HOH HOH . 
D 4 HOH A 65 665 591 HOH HOH . 
D 4 HOH A 66 666 592 HOH HOH . 
D 4 HOH A 67 667 593 HOH HOH . 
D 4 HOH A 68 668 594 HOH HOH . 
D 4 HOH A 69 669 595 HOH HOH . 
D 4 HOH A 70 670 596 HOH HOH . 
D 4 HOH A 71 671 597 HOH HOH . 
D 4 HOH A 72 672 598 HOH HOH . 
D 4 HOH A 73 673 599 HOH HOH . 
D 4 HOH A 74 674 600 HOH HOH . 
D 4 HOH A 75 675 601 HOH HOH . 
D 4 HOH A 76 676 602 HOH HOH . 
D 4 HOH A 77 677 603 HOH HOH . 
D 4 HOH A 78 678 605 HOH HOH . 
D 4 HOH A 79 679 606 HOH HOH . 
D 4 HOH A 80 680 608 HOH HOH . 
D 4 HOH A 81 681 609 HOH HOH . 
D 4 HOH A 82 682 610 HOH HOH . 
D 4 HOH A 83 683 612 HOH HOH . 
D 4 HOH A 84 684 614 HOH HOH . 
D 4 HOH A 85 685 615 HOH HOH . 
D 4 HOH A 86 686 616 HOH HOH . 
D 4 HOH A 87 687 618 HOH HOH . 
D 4 HOH A 88 688 619 HOH HOH . 
D 4 HOH A 89 689 620 HOH HOH . 
D 4 HOH A 90 690 622 HOH HOH . 
D 4 HOH A 91 691 623 HOH HOH . 
D 4 HOH A 92 692 630 HOH HOH . 
D 4 HOH A 93 693 631 HOH HOH . 
D 4 HOH A 94 694 632 HOH HOH . 
D 4 HOH A 95 695 633 HOH HOH . 
D 4 HOH A 96 696 634 HOH HOH . 
D 4 HOH A 97 697 635 HOH HOH . 
D 4 HOH A 98 698 638 HOH HOH . 
D 4 HOH A 99 699 639 HOH HOH . 
D 4 HOH A 100 700 641 HOH HOH . 
D 4 HOH A 101 701 642 HOH HOH . 
D 4 HOH A 102 702 643 HOH HOH . 
E 4 HOH B 1 701 514 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C2' 2VR . . . C 3 65.6 46.089 28.964 1 46.23 ? C2' 2VR 501 A 1 
HETATM 2 C C1' 2VR . . . C 3 66.955 45.408 29.17 1 45.07 ? C1' 2VR 501 A 1 
HETATM 3 C C18 2VR . . . C 3 67.895 46.11 30.157 1 45.83 ? C18 2VR 501 A 1 
HETATM 4 C C5 2VR . . . C 3 67.17 46.642 31.399 1 46.69 ? C5 2VR 501 A 1 
HETATM 5 C C4 2VR . . . C 3 67.787 46.547 32.64 1 45.17 ? C4 2VR 501 A 1 
HETATM 6 C C3 2VR . . . C 3 67.126 46.983 33.791 1 47.96 ? C3 2VR 501 A 1 
HETATM 7 C C2 2VR . . . C 3 65.836 47.484 33.707 1 48.79 ? C2 2VR 501 A 1 
HETATM 8 C C1 2VR . . . C 3 65.207 47.599 32.465 1 48.33 ? C1 2VR 501 A 1 
HETATM 9 C C8' 2VR . . . C 3 63.813 48.194 32.373 1 49.26 ? C8' 2VR 501 A 1 
HETATM 10 C C6 2VR . . . C 3 65.889 47.182 31.315 1 46.92 ? C6 2VR 501 A 1 
HETATM 11 C C7 2VR . . . C 3 65.338 47.228 29.969 1 45.61 ? C7 2VR 501 A 1 
HETATM 12 C C8 2VR . . . C 3 64.665 48.36 29.533 1 45.03 ? C8 2VR 501 A 1 
HETATM 13 C C9 2VR . . . C 3 64.235 48.454 28.129 1 44.26 ? C9 2VR 501 A 1 
HETATM 14 C C19 2VR . . . C 3 65.283 48.787 27.066 1 45.91 ? C19 2VR 501 A 1 
HETATM 15 C C10 2VR . . . C 3 62.92 48.223 27.746 1 42.68 ? C10 2VR 501 A 1 
HETATM 16 C C11 2VR . . . C 3 61.828 47.878 28.669 1 38.85 ? C11 2VR 501 A 1 
HETATM 17 C C12 2VR . . . C 3 60.748 47.127 28.222 1 36.78 ? C12 2VR 501 A 1 
HETATM 18 C C13 2VR . . . C 3 59.629 46.784 29.108 1 33.24 ? C13 2VR 501 A 1 
HETATM 19 C C20 2VR . . . C 3 59.887 46.136 30.467 1 32.99 ? C20 2VR 501 A 1 
HETATM 20 C C14 2VR . . . C 3 58.337 47.07 28.654 1 34.78 ? C14 2VR 501 A 1 
HETATM 21 C C15 2VR . . . C 3 57.1 46.822 29.391 1 35.27 ? C15 2VR 501 A 1 
HETATM 22 O O1 2VR . . . C 3 56.135 47.582 29.152 1 32.02 ? O1 2VR 501 A 1 
HETATM 23 O O2 2VR . . . C 3 57.058 45.891 30.232 1 35.96 ? O2 2VR 501 A 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          12 
_model_server_stats.element_count           23 
#