data_4POP # _model_server_result.job_id 7AsLLwmND1MOZy3lQ_KsYQ _model_server_result.datetime_utc '2024-11-24 09:07:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4pop # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"VA","auth_seq_id":222}' # _entry.id 4POP # _exptl.entry_id 4POP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 326.383 _entity.id 10 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.13 _cell.angle_gamma 90 _cell.entry_id 4POP _cell.length_a 62.61 _cell.length_b 84.12 _cell.length_c 127.15 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4POP _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,WA 1 1 B,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,XA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 10 _struct_asym.id VA _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H30 O8' _chem_comp.formula_weight 326.383 _chem_comp.id P33 _chem_comp.mon_nstd_flag . _chem_comp.name 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'HEPTAETHYLENE GLYCOL;PEG330' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O22 C21 P33 sing 341 n n O22 H22 P33 sing 342 n n C21 C20 P33 sing 343 n n C21 H211 P33 sing 344 n n C21 H212 P33 sing 345 n n C20 O19 P33 sing 346 n n C20 H201 P33 sing 347 n n C20 H202 P33 sing 348 n n O19 C18 P33 sing 349 n n C18 C17 P33 sing 350 n n C18 H181 P33 sing 351 n n C18 H182 P33 sing 352 n n C17 O16 P33 sing 353 n n C17 H171 P33 sing 354 n n C17 H172 P33 sing 355 n n O16 C15 P33 sing 356 n n C15 C14 P33 sing 357 n n C15 H151 P33 sing 358 n n C15 H152 P33 sing 359 n n C14 O13 P33 sing 360 n n C14 H141 P33 sing 361 n n C14 H142 P33 sing 362 n n O13 C12 P33 sing 363 n n C12 C11 P33 sing 364 n n C12 H121 P33 sing 365 n n C12 H122 P33 sing 366 n n C11 O10 P33 sing 367 n n C11 H111 P33 sing 368 n n C11 H112 P33 sing 369 n n O10 C9 P33 sing 370 n n C9 C8 P33 sing 371 n n C9 H91 P33 sing 372 n n C9 H92 P33 sing 373 n n C8 O7 P33 sing 374 n n C8 H81 P33 sing 375 n n C8 H82 P33 sing 376 n n O7 C6 P33 sing 377 n n C6 C5 P33 sing 378 n n C6 H61 P33 sing 379 n n C6 H62 P33 sing 380 n n C5 O4 P33 sing 381 n n C5 H51 P33 sing 382 n n C5 H52 P33 sing 383 n n O4 C3 P33 sing 384 n n C3 C2 P33 sing 385 n n C3 H31 P33 sing 386 n n C3 H32 P33 sing 387 n n C2 O1 P33 sing 388 n n C2 H21 P33 sing 389 n n C2 H22A P33 sing 390 n n O1 HO1 P33 sing 391 n n # _atom_sites.entry_id 4POP _atom_sites.fract_transf_matrix[1][1] 0.015972 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001434 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011888 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007896 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 2VY A 1 201 1 2VY LIG . D 3 PG0 A 1 202 12 PG0 PG0 . E 3 PG0 A 1 203 13 PG0 PG0 . F 4 BNG A 1 204 2 BNG BNG . G 4 BNG A 1 205 3 BNG BNG . H 4 BNG A 1 206 8 BNG BNG . I 5 PEG A 1 207 4 PEG PEG . J 5 PEG A 1 208 9 PEG PEG . K 5 PEG A 1 209 11 PEG PEG . L 5 PEG A 1 210 12 PEG PEG . M 5 PEG A 1 211 29 PEG PEG . N 5 PEG A 1 212 30 PEG PEG . O 5 PEG A 1 213 34 PEG PEG . P 5 PEG A 1 214 37 PEG PEG . Q 5 PEG A 1 215 39 PEG PEG . R 5 PEG A 1 216 40 PEG PEG . S 6 PG4 A 1 217 1 PG4 PG4 . T 6 PG4 A 1 218 2 PG4 PG4 . U 6 PG4 A 1 219 11 PG4 PG4 . V 6 PG4 A 1 220 15 PG4 PG4 . W 7 1PE A 1 221 2 1PE 1PE . X 7 1PE A 1 222 3 1PE 1PE . Y 8 PGE A 1 223 1 PGE PGE . Z 9 P6G A 1 224 1 P6G P6G . AA 2 2VY B 1 201 2 2VY LIG . BA 3 PG0 B 1 202 9 PG0 PG0 . CA 4 BNG B 1 203 1 BNG BNG . DA 4 BNG B 1 204 5 BNG BNG . EA 5 PEG B 1 205 1 PEG PEG . FA 5 PEG B 1 206 5 PEG PEG . GA 5 PEG B 1 207 6 PEG PEG . HA 5 PEG B 1 208 10 PEG PEG . IA 5 PEG B 1 209 31 PEG PEG . JA 5 PEG B 1 210 32 PEG PEG . KA 5 PEG B 1 211 33 PEG PEG . LA 5 PEG B 1 212 35 PEG PEG . MA 5 PEG B 1 213 36 PEG PEG . NA 5 PEG B 1 214 38 PEG PEG . OA 5 PEG B 1 215 41 PEG PEG . PA 6 PG4 B 1 216 6 PG4 PG4 . QA 6 PG4 B 1 217 7 PG4 PG4 . RA 6 PG4 B 1 218 9 PG4 PG4 . SA 6 PG4 B 1 219 13 PG4 PG4 . TA 6 PG4 B 1 220 14 PG4 PG4 . UA 7 1PE B 1 221 1 1PE 1PE . VA 10 P33 B 1 222 1 P33 P33 . WA 11 HOH A 1 301 1 HOH HOH . WA 11 HOH A 2 302 2 HOH HOH . WA 11 HOH A 3 303 3 HOH HOH . WA 11 HOH A 4 304 4 HOH HOH . WA 11 HOH A 5 305 5 HOH HOH . WA 11 HOH A 6 306 6 HOH HOH . WA 11 HOH A 7 307 7 HOH HOH . WA 11 HOH A 8 308 8 HOH HOH . WA 11 HOH A 9 309 9 HOH HOH . WA 11 HOH A 10 310 12 HOH HOH . WA 11 HOH A 11 311 14 HOH HOH . WA 11 HOH A 12 312 15 HOH HOH . WA 11 HOH A 13 313 16 HOH HOH . WA 11 HOH A 14 314 17 HOH HOH . WA 11 HOH A 15 315 36 HOH HOH . WA 11 HOH A 16 316 37 HOH HOH . WA 11 HOH A 17 317 44 HOH HOH . WA 11 HOH A 18 318 48 HOH HOH . WA 11 HOH A 19 319 49 HOH HOH . WA 11 HOH A 20 320 50 HOH HOH . WA 11 HOH A 21 321 51 HOH HOH . WA 11 HOH A 22 322 52 HOH HOH . WA 11 HOH A 23 323 53 HOH HOH . WA 11 HOH A 24 324 55 HOH HOH . WA 11 HOH A 25 325 56 HOH HOH . WA 11 HOH A 26 326 57 HOH HOH . WA 11 HOH A 27 327 58 HOH HOH . WA 11 HOH A 28 328 61 HOH HOH . WA 11 HOH A 29 329 76 HOH HOH . WA 11 HOH A 30 330 77 HOH HOH . WA 11 HOH A 31 331 78 HOH HOH . WA 11 HOH A 32 332 89 HOH HOH . WA 11 HOH A 33 333 90 HOH HOH . WA 11 HOH A 34 334 94 HOH HOH . WA 11 HOH A 35 335 95 HOH HOH . WA 11 HOH A 36 336 97 HOH HOH . WA 11 HOH A 37 337 98 HOH HOH . WA 11 HOH A 38 338 107 HOH HOH . WA 11 HOH A 39 339 108 HOH HOH . WA 11 HOH A 40 340 109 HOH HOH . WA 11 HOH A 41 341 119 HOH HOH . WA 11 HOH A 42 342 120 HOH HOH . WA 11 HOH A 43 343 124 HOH HOH . XA 11 HOH B 1 301 18 HOH HOH . XA 11 HOH B 2 302 19 HOH HOH . XA 11 HOH B 3 303 20 HOH HOH . XA 11 HOH B 4 304 21 HOH HOH . XA 11 HOH B 5 305 22 HOH HOH . XA 11 HOH B 6 306 23 HOH HOH . XA 11 HOH B 7 307 24 HOH HOH . XA 11 HOH B 8 308 25 HOH HOH . XA 11 HOH B 9 309 26 HOH HOH . XA 11 HOH B 10 310 27 HOH HOH . XA 11 HOH B 11 311 28 HOH HOH . XA 11 HOH B 12 312 29 HOH HOH . XA 11 HOH B 13 313 30 HOH HOH . XA 11 HOH B 14 314 34 HOH HOH . XA 11 HOH B 15 315 35 HOH HOH . XA 11 HOH B 16 316 40 HOH HOH . XA 11 HOH B 17 317 41 HOH HOH . XA 11 HOH B 18 318 42 HOH HOH . XA 11 HOH B 19 319 43 HOH HOH . XA 11 HOH B 20 320 63 HOH HOH . XA 11 HOH B 21 321 64 HOH HOH . XA 11 HOH B 22 322 65 HOH HOH . XA 11 HOH B 23 323 66 HOH HOH . XA 11 HOH B 24 324 67 HOH HOH . XA 11 HOH B 25 325 68 HOH HOH . XA 11 HOH B 26 326 69 HOH HOH . XA 11 HOH B 27 327 70 HOH HOH . XA 11 HOH B 28 328 71 HOH HOH . XA 11 HOH B 29 329 72 HOH HOH . XA 11 HOH B 30 330 73 HOH HOH . XA 11 HOH B 31 331 75 HOH HOH . XA 11 HOH B 32 332 80 HOH HOH . XA 11 HOH B 33 333 82 HOH HOH . XA 11 HOH B 34 334 83 HOH HOH . XA 11 HOH B 35 335 84 HOH HOH . XA 11 HOH B 36 336 85 HOH HOH . XA 11 HOH B 37 337 86 HOH HOH . XA 11 HOH B 38 338 87 HOH HOH . XA 11 HOH B 39 339 102 HOH HOH . XA 11 HOH B 40 340 112 HOH HOH . XA 11 HOH B 41 341 113 HOH HOH . XA 11 HOH B 42 342 117 HOH HOH . XA 11 HOH B 43 343 118 HOH HOH . XA 11 HOH B 44 344 125 HOH HOH . XA 11 HOH B 45 345 126 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O22 P33 . . . VA 10 37.027 -1.167 3.559 0.55 42.49 ? O22 P33 222 B 1 HETATM 2 C C21 P33 . . . VA 10 38.276 -0.544 3.867 0.55 47.01 ? C21 P33 222 B 1 HETATM 3 C C20 P33 . . . VA 10 38.402 0.758 3.126 0.55 73.21 ? C20 P33 222 B 1 HETATM 4 O O19 P33 . . . VA 10 37.094 1.261 2.818 0.55 97.11 ? O19 P33 222 B 1 HETATM 5 C C18 P33 . . . VA 10 37.025 2.647 2.512 0.55 47.97 ? C18 P33 222 B 1 HETATM 6 C C17 P33 . . . VA 10 35.577 3 2.072 0.55 45.75 ? C17 P33 222 B 1 HETATM 7 O O16 P33 . . . VA 10 35.533 4.332 1.562 0.55 72.83 ? O16 P33 222 B 1 HETATM 8 C C15 P33 . . . VA 10 34.363 5.08 1.899 0.55 56.41 ? C15 P33 222 B 1 HETATM 9 C C14 P33 . . . VA 10 33.407 5.22 0.643 0.55 61.71 ? C14 P33 222 B 1 HETATM 10 O O13 P33 . . . VA 10 32.28 4.279 0.74 0.55 64.87 ? O13 P33 222 B 1 HETATM 11 C C12 P33 . . . VA 10 31.19 4.473 -0.242 0.55 92.02 ? C12 P33 222 B 1 HETATM 12 C C11 P33 . . . VA 10 30.081 5.441 0.278 0.55 67.31 ? C11 P33 222 B 1 HETATM 13 O O10 P33 . . . VA 10 29.14 5.815 -0.799 0.55 49.8 ? O10 P33 222 B 1 HETATM 14 C C9 P33 . . . VA 10 27.919 6.43 -0.375 0.55 58.32 ? C9 P33 222 B 1 HETATM 15 C C8 P33 . . . VA 10 26.771 5.411 -0.316 0.55 92.16 ? C8 P33 222 B 1 HETATM 16 O O7 P33 . . . VA 10 26.066 5.332 -1.557 0.55 78.29 ? O7 P33 222 B 1 HETATM 17 C C6 P33 . . . VA 10 24.701 5.785 -1.512 0.55 50.08 ? C6 P33 222 B 1 HETATM 18 C C5 P33 . . . VA 10 24.643 7.271 -1.79 0.55 59.6 ? C5 P33 222 B 1 HETATM 19 O O4 P33 . . . VA 10 24.219 7.975 -0.621 0.55 108.71 ? O4 P33 222 B 1 HETATM 20 C C3 P33 . . . VA 10 25.268 8.362 0.248 0.55 55.19 ? C3 P33 222 B 1 HETATM 21 C C2 P33 . . . VA 10 26.06 9.492 -0.475 0.55 46.46 ? C2 P33 222 B 1 HETATM 22 O O1 P33 . . . VA 10 27.128 9.943 0.358 0.55 56.41 ? O1 P33 222 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 22 #