data_4POV
#
_model_server_result.job_id            Sd-u6Tt-Kwvtea2IwmRcRQ 
_model_server_result.datetime_utc      '2024-11-05 07:54:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4pov 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":209}' 
#
_entry.id    4POV 
#
_exptl.entry_id    4POV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              306.395 
_entity.id                          5 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            'nonyl beta-D-glucopyranoside' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          96.08 
_cell.angle_gamma         90 
_cell.entry_id            4POV 
_cell.length_a            62.72 
_cell.length_b            84.35 
_cell.length_c            127.25 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4POV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 software_defined_assembly 1 
PISA monomeric 1 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,NA 1 1 
B,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,OA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 J N N 
? 5 K N N 
? 5 L N N 
? 5 CA N N 
? 5 DA N N 
? 5 EA N N 
#
_chem_comp.formula           'C15 H30 O6' 
_chem_comp.formula_weight    306.395 
_chem_comp.id                BNG 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              'nonyl beta-D-glucopyranoside' 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     'Beta-NONYLGLUCOSIDE;nonyl beta-D-glucoside;nonyl D-glucoside;nonyl glucoside' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 BNG sing 123 n n 
C1 O1 BNG sing 124 n n 
C1 O5 BNG sing 125 n n 
C1 H1 BNG sing 126 n n 
C2 C3 BNG sing 127 n n 
C2 O2 BNG sing 128 n n 
C2 H2 BNG sing 129 n n 
C3 C4 BNG sing 130 n n 
C3 O3 BNG sing 131 n n 
C3 H3 BNG sing 132 n n 
C4 C5 BNG sing 133 n n 
C4 O4 BNG sing 134 n n 
C4 H4 BNG sing 135 n n 
C5 C6 BNG sing 136 n n 
C5 O5 BNG sing 137 n n 
C5 H5 BNG sing 138 n n 
C6 O6 BNG sing 139 n n 
C6 H61 BNG sing 140 n n 
C6 H62 BNG sing 141 n n 
C1' C2' BNG sing 142 n n 
C1' O1 BNG sing 143 n n 
C1' "H1'1" BNG sing 144 n n 
C1' "H1'2" BNG sing 145 n n 
C2' C3' BNG sing 146 n n 
C2' "H2'1" BNG sing 147 n n 
C2' "H2'2" BNG sing 148 n n 
C3' C4' BNG sing 149 n n 
C3' "H3'1" BNG sing 150 n n 
C3' "H3'2" BNG sing 151 n n 
C4' C5' BNG sing 152 n n 
C4' "H4'1" BNG sing 153 n n 
C4' "H4'2" BNG sing 154 n n 
C5' C6' BNG sing 155 n n 
C5' "H5'1" BNG sing 156 n n 
C5' "H5'2" BNG sing 157 n n 
C6' C7' BNG sing 158 n n 
C6' "H6'1" BNG sing 159 n n 
C6' "H6'2" BNG sing 160 n n 
C7' C8' BNG sing 161 n n 
C7' "H7'1" BNG sing 162 n n 
C7' "H7'2" BNG sing 163 n n 
C8' C9' BNG sing 164 n n 
C8' "H8'1" BNG sing 165 n n 
C8' "H8'2" BNG sing 166 n n 
C9' "H9'1" BNG sing 167 n n 
C9' "H9'2" BNG sing 168 n n 
C9' "H9'3" BNG sing 169 n n 
O2 HO2 BNG sing 170 n n 
O3 HO3 BNG sing 171 n n 
O4 HO4 BNG sing 172 n n 
O6 HO6 BNG sing 173 n n 
#
_pdbx_chem_comp_identifier.comp_id            BNG 
_pdbx_chem_comp_identifier.identifier         b-nonylglucoside 
_pdbx_chem_comp_identifier.type               'IUPAC CARBOHYDRATE SYMBOL' 
_pdbx_chem_comp_identifier.program            PDB-CARE 
_pdbx_chem_comp_identifier.program_version    1 
#
_atom_sites.entry_id                     4POV 
_atom_sites.fract_transf_matrix[1][1]    0.015944 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001697 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011855 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007903 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 2VY A 1 201 1 2VY LIG . 
D 3 PG0 A 1 202 11 PG0 PG0 . 
E 4 PG4 A 1 203 1 PG4 PG4 . 
F 4 PG4 A 1 204 6 PG4 PG4 . 
G 4 PG4 A 1 205 8 PG4 PG4 . 
H 4 PG4 A 1 206 11 PG4 PG4 . 
I 4 PG4 A 1 207 14 PG4 PG4 . 
J 5 BNG A 1 208 3 BNG BNG . 
K 5 BNG A 1 209 5 BNG BNG . 
L 5 BNG A 1 210 6 BNG BNG . 
M 6 PEG A 1 211 8 PEG PEG . 
N 6 PEG A 1 212 11 PEG PEG . 
O 6 PEG A 1 213 14 PEG PEG . 
P 6 PEG A 1 214 15 PEG PEG . 
Q 6 PEG A 1 215 16 PEG PEG . 
R 7 1PE A 1 216 5 1PE 1PE . 
S 8 PGE A 1 217 1 PGE PGE . 
T 8 PGE A 1 218 2 PGE PGE . 
U 8 PGE A 1 219 4 PGE PGE . 
V 9 P6G A 1 220 1 P6G P6G . 
W 2 2VY B 1 201 2 2VY LIG . 
X 3 PG0 B 1 202 4 PG0 PG0 . 
Y 4 PG4 B 1 203 4 PG4 PG4 . 
Z 4 PG4 B 1 204 13 PG4 PG4 . 
AA 4 PG4 B 1 205 15 PG4 PG4 . 
BA 4 PG4 B 1 206 16 PG4 PG4 . 
CA 5 BNG B 1 207 1 BNG BNG . 
DA 5 BNG B 1 208 2 BNG BNG . 
EA 5 BNG B 1 209 4 BNG BNG . 
FA 6 PEG B 1 210 1 PEG PEG . 
GA 6 PEG B 1 211 3 PEG PEG . 
HA 6 PEG B 1 212 4 PEG PEG . 
IA 6 PEG B 1 213 6 PEG PEG . 
JA 6 PEG B 1 214 13 PEG PEG . 
KA 7 1PE B 1 215 6 1PE 1PE . 
LA 7 1PE B 1 216 7 1PE 1PE . 
MA 10 CL B 1 217 1 CL CL . 
NA 11 HOH A 1 301 1 HOH HOH . 
NA 11 HOH A 2 302 2 HOH HOH . 
NA 11 HOH A 3 303 5 HOH HOH . 
NA 11 HOH A 4 304 6 HOH HOH . 
NA 11 HOH A 5 305 10 HOH HOH . 
NA 11 HOH A 6 306 11 HOH HOH . 
NA 11 HOH A 7 307 12 HOH HOH . 
NA 11 HOH A 8 308 13 HOH HOH . 
NA 11 HOH A 9 309 14 HOH HOH . 
NA 11 HOH A 10 310 15 HOH HOH . 
NA 11 HOH A 11 311 16 HOH HOH . 
NA 11 HOH A 12 312 17 HOH HOH . 
NA 11 HOH A 13 313 18 HOH HOH . 
NA 11 HOH A 14 314 19 HOH HOH . 
NA 11 HOH A 15 315 20 HOH HOH . 
NA 11 HOH A 16 316 21 HOH HOH . 
NA 11 HOH A 17 317 22 HOH HOH . 
NA 11 HOH A 18 318 23 HOH HOH . 
NA 11 HOH A 19 319 24 HOH HOH . 
NA 11 HOH A 20 320 26 HOH HOH . 
NA 11 HOH A 21 321 27 HOH HOH . 
NA 11 HOH A 22 322 28 HOH HOH . 
NA 11 HOH A 23 323 32 HOH HOH . 
NA 11 HOH A 24 324 49 HOH HOH . 
NA 11 HOH A 25 325 53 HOH HOH . 
NA 11 HOH A 26 326 58 HOH HOH . 
NA 11 HOH A 27 327 61 HOH HOH . 
NA 11 HOH A 28 328 62 HOH HOH . 
NA 11 HOH A 29 329 63 HOH HOH . 
NA 11 HOH A 30 330 64 HOH HOH . 
NA 11 HOH A 31 331 85 HOH HOH . 
NA 11 HOH A 32 332 88 HOH HOH . 
NA 11 HOH A 33 333 105 HOH HOH . 
OA 11 HOH B 1 301 33 HOH HOH . 
OA 11 HOH B 2 302 34 HOH HOH . 
OA 11 HOH B 3 303 35 HOH HOH . 
OA 11 HOH B 4 304 36 HOH HOH . 
OA 11 HOH B 5 305 37 HOH HOH . 
OA 11 HOH B 6 306 39 HOH HOH . 
OA 11 HOH B 7 307 40 HOH HOH . 
OA 11 HOH B 8 308 41 HOH HOH . 
OA 11 HOH B 9 309 42 HOH HOH . 
OA 11 HOH B 10 310 43 HOH HOH . 
OA 11 HOH B 11 311 44 HOH HOH . 
OA 11 HOH B 12 312 45 HOH HOH . 
OA 11 HOH B 13 313 46 HOH HOH . 
OA 11 HOH B 14 314 47 HOH HOH . 
OA 11 HOH B 15 315 48 HOH HOH . 
OA 11 HOH B 16 316 54 HOH HOH . 
OA 11 HOH B 17 317 55 HOH HOH . 
OA 11 HOH B 18 318 56 HOH HOH . 
OA 11 HOH B 19 319 57 HOH HOH . 
OA 11 HOH B 20 320 60 HOH HOH . 
OA 11 HOH B 21 321 67 HOH HOH . 
OA 11 HOH B 22 322 68 HOH HOH . 
OA 11 HOH B 23 323 69 HOH HOH . 
OA 11 HOH B 24 324 70 HOH HOH . 
OA 11 HOH B 25 325 74 HOH HOH . 
OA 11 HOH B 26 326 75 HOH HOH . 
OA 11 HOH B 27 327 76 HOH HOH . 
OA 11 HOH B 28 328 77 HOH HOH . 
OA 11 HOH B 29 329 81 HOH HOH . 
OA 11 HOH B 30 330 95 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BNG . . . K 5 9.944 11.857 59.943 1 123.58 ? C1 BNG 209 A 1 
HETATM 2 C C2 BNG . . . K 5 10.433 13.176 59.406 1 95.25 ? C2 BNG 209 A 1 
HETATM 3 C C3 BNG . . . K 5 9.357 14.222 59.408 1 85.14 ? C3 BNG 209 A 1 
HETATM 4 C C4 BNG . . . K 5 8.125 13.777 58.699 1 110.7 ? C4 BNG 209 A 1 
HETATM 5 C C5 BNG . . . K 5 7.613 12.438 59.184 1 112.84 ? C5 BNG 209 A 1 
HETATM 6 C C6 BNG . . . K 5 6.576 12.004 58.24 1 116.38 ? C6 BNG 209 A 1 
HETATM 7 C C1' BNG . . . K 5 10.638 9.547 59.985 1 119.42 ? C1' BNG 209 A 1 
HETATM 8 C C2' BNG . . . K 5 11.935 8.671 59.849 1 78.86 ? C2' BNG 209 A 1 
HETATM 9 C C3' BNG . . . K 5 11.602 7.223 60.246 1 76.37 ? C3' BNG 209 A 1 
HETATM 10 C C4' BNG . . . K 5 11.599 6.353 58.967 1 73.83 ? C4' BNG 209 A 1 
HETATM 11 C C5' BNG . . . K 5 11.82 4.904 59.335 1 60.73 ? C5' BNG 209 A 1 
HETATM 12 C C6' BNG . . . K 5 12.232 4.129 58.094 1 70.2 ? C6' BNG 209 A 1 
HETATM 13 C C7' BNG . . . K 5 11.12 3.113 57.825 1 114.79 ? C7' BNG 209 A 1 
HETATM 14 C C8' BNG . . . K 5 10.773 2.422 59.155 1 126.66 ? C8' BNG 209 A 1 
HETATM 15 C C9' BNG . . . K 5 10.142 1.001 58.893 1 124.27 ? C9' BNG 209 A 1 
HETATM 16 O O1 BNG . . . K 5 10.986 10.892 59.739 1 122.49 ? O1 BNG 209 A 1 
HETATM 17 O O2 BNG . . . K 5 11.532 13.645 60.169 1 150.22 ? O2 BNG 209 A 1 
HETATM 18 O O3 BNG . . . K 5 9.892 15.416 58.799 1 121.91 ? O3 BNG 209 A 1 
HETATM 19 O O4 BNG . . . K 5 7.096 14.754 58.878 1 169.28 ? O4 BNG 209 A 1 
HETATM 20 O O5 BNG . . . K 5 8.689 11.409 59.275 1 169.4 ? O5 BNG 209 A 1 
HETATM 21 O O6 BNG . . . K 5 5.814 10.936 58.723 1 123.89 ? O6 BNG 209 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           21 
#