data_4PP9 # _model_server_result.job_id Cf3-eDA3v4JmyHYIObxZvw _model_server_result.datetime_utc '2024-11-24 17:08:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4pp9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":701}' # _entry.id 4PP9 # _exptl.entry_id 4PP9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 342.354 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[1-(3-cyanobenzyl)-1H-pyrazol-4-yl]-2H-indazole-3-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.21 _cell.angle_gamma 90 _cell.entry_id 4PP9 _cell.length_a 55.039 _cell.length_b 104.09 _cell.length_c 57.313 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PP9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,G 1 1 B,F,H 2 1 A,B,C,D,E,F,G,H 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C19 H14 N6 O' _chem_comp.formula_weight 342.354 _chem_comp.id 2VT _chem_comp.mon_nstd_flag . _chem_comp.name N-[1-(3-cyanobenzyl)-1H-pyrazol-4-yl]-2H-indazole-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N27 C26 2VT trip 1 n n C26 C24 2VT sing 2 n n C23 C24 2VT doub 3 n y C23 C22 2VT sing 4 n y C24 C25 2VT sing 5 n y C22 C21 2VT doub 6 n y C25 C20 2VT doub 7 n y C21 C20 2VT sing 8 n y C20 C19 2VT sing 9 n n C19 N17 2VT sing 10 n n N17 C18 2VT sing 11 n y N17 N16 2VT sing 12 n y C18 C14 2VT doub 13 n y N16 C15 2VT doub 14 n y C14 C15 2VT sing 15 n y C14 N13 2VT sing 16 n n N13 C11 2VT sing 17 n n C11 O12 2VT doub 18 n n C11 C7 2VT sing 19 n n N8 C7 2VT sing 20 n y N8 N9 2VT sing 21 n y C7 C5 2VT doub 22 n y N9 C4 2VT doub 23 n y C5 C4 2VT sing 24 n y C5 C6 2VT sing 25 n y C4 C3 2VT sing 26 n y C6 C1 2VT doub 27 n y C3 C2 2VT doub 28 n y C1 C2 2VT sing 29 n y C1 H1 2VT sing 30 n n C2 H2 2VT sing 31 n n C3 H3 2VT sing 32 n n C6 H4 2VT sing 33 n n N8 H5 2VT sing 34 n n N13 H6 2VT sing 35 n n C15 H7 2VT sing 36 n n C18 H8 2VT sing 37 n n C19 H9 2VT sing 38 n n C19 H10 2VT sing 39 n n C21 H11 2VT sing 40 n n C22 H12 2VT sing 41 n n C23 H13 2VT sing 42 n n C25 H14 2VT sing 43 n n # _atom_sites.entry_id 4PP9 _atom_sites.fract_transf_matrix[1][1] 0.018169 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006688 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009607 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018593 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 701 81 SO4 SO4 . D 2 SO4 A 1 702 82 SO4 SO4 . E 3 2VT A 1 703 1 2VT DRG . F 3 2VT B 1 701 1 2VT DRG . G 4 HOH A 1 801 5 HOH HOH . G 4 HOH A 2 802 7 HOH HOH . G 4 HOH A 3 803 10 HOH HOH . G 4 HOH A 4 804 12 HOH HOH . G 4 HOH A 5 805 13 HOH HOH . G 4 HOH A 6 806 17 HOH HOH . G 4 HOH A 7 807 19 HOH HOH . G 4 HOH A 8 808 21 HOH HOH . G 4 HOH A 9 809 22 HOH HOH . G 4 HOH A 10 810 27 HOH HOH . G 4 HOH A 11 811 31 HOH HOH . G 4 HOH A 12 812 33 HOH HOH . G 4 HOH A 13 813 35 HOH HOH . G 4 HOH A 14 814 36 HOH HOH . G 4 HOH A 15 815 38 HOH HOH . G 4 HOH A 16 816 39 HOH HOH . G 4 HOH A 17 817 40 HOH HOH . G 4 HOH A 18 818 44 HOH HOH . G 4 HOH A 19 819 46 HOH HOH . G 4 HOH A 20 820 47 HOH HOH . G 4 HOH A 21 821 49 HOH HOH . G 4 HOH A 22 822 50 HOH HOH . G 4 HOH A 23 823 51 HOH HOH . G 4 HOH A 24 824 54 HOH HOH . G 4 HOH A 25 825 56 HOH HOH . G 4 HOH A 26 826 59 HOH HOH . G 4 HOH A 27 827 60 HOH HOH . G 4 HOH A 28 828 61 HOH HOH . G 4 HOH A 29 829 64 HOH HOH . G 4 HOH A 30 830 65 HOH HOH . G 4 HOH A 31 831 66 HOH HOH . G 4 HOH A 32 832 68 HOH HOH . G 4 HOH A 33 833 77 HOH HOH . G 4 HOH A 34 834 80 HOH HOH . G 4 HOH A 35 835 82 HOH HOH . G 4 HOH A 36 836 83 HOH HOH . G 4 HOH A 37 837 86 HOH HOH . G 4 HOH A 38 838 88 HOH HOH . G 4 HOH A 39 839 89 HOH HOH . G 4 HOH A 40 840 90 HOH HOH . G 4 HOH A 41 841 93 HOH HOH . G 4 HOH A 42 842 98 HOH HOH . H 4 HOH B 1 801 1 HOH HOH . H 4 HOH B 2 802 8 HOH HOH . H 4 HOH B 3 803 11 HOH HOH . H 4 HOH B 4 804 14 HOH HOH . H 4 HOH B 5 805 15 HOH HOH . H 4 HOH B 6 806 16 HOH HOH . H 4 HOH B 7 807 20 HOH HOH . H 4 HOH B 8 808 23 HOH HOH . H 4 HOH B 9 809 26 HOH HOH . H 4 HOH B 10 810 29 HOH HOH . H 4 HOH B 11 811 30 HOH HOH . H 4 HOH B 12 812 43 HOH HOH . H 4 HOH B 13 813 52 HOH HOH . H 4 HOH B 14 814 53 HOH HOH . H 4 HOH B 15 815 55 HOH HOH . H 4 HOH B 16 816 63 HOH HOH . H 4 HOH B 17 817 69 HOH HOH . H 4 HOH B 18 818 70 HOH HOH . H 4 HOH B 19 819 72 HOH HOH . H 4 HOH B 20 820 74 HOH HOH . H 4 HOH B 21 821 76 HOH HOH . H 4 HOH B 22 822 78 HOH HOH . H 4 HOH B 23 823 81 HOH HOH . H 4 HOH B 24 824 84 HOH HOH . H 4 HOH B 25 825 85 HOH HOH . H 4 HOH B 26 826 87 HOH HOH . H 4 HOH B 27 827 91 HOH HOH . H 4 HOH B 28 828 92 HOH HOH . H 4 HOH B 29 829 94 HOH HOH . H 4 HOH B 30 830 95 HOH HOH . H 4 HOH B 31 831 96 HOH HOH . H 4 HOH B 32 832 97 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 2VT . . . F 3 3.453 29.252 -20.276 1 23.15 ? C1 2VT 701 B 1 HETATM 2 C C2 2VT . . . F 3 3.092 28.011 -19.728 1 22.5 ? C2 2VT 701 B 1 HETATM 3 C C3 2VT . . . F 3 2.802 26.937 -20.54 1 21.81 ? C3 2VT 701 B 1 HETATM 4 C C4 2VT . . . F 3 2.882 27.082 -21.93 1 24.04 ? C4 2VT 701 B 1 HETATM 5 C C5 2VT . . . F 3 3.25 28.341 -22.495 1 24.85 ? C5 2VT 701 B 1 HETATM 6 C C6 2VT . . . F 3 3.541 29.422 -21.642 1 23.84 ? C6 2VT 701 B 1 HETATM 7 C C7 2VT . . . F 3 3.215 28.115 -23.955 1 24.98 ? C7 2VT 701 B 1 HETATM 8 N N8 2VT . . . F 3 2.877 26.851 -24.109 1 26.13 ? N8 2VT 701 B 1 HETATM 9 N N9 2VT . . . F 3 2.662 26.25 -22.992 1 25.21 ? N9 2VT 701 B 1 HETATM 10 C C11 2VT . . . F 3 3.524 29.079 -25.035 1 24.91 ? C11 2VT 701 B 1 HETATM 11 O O12 2VT . . . F 3 3.913 30.181 -24.702 1 26.93 ? O12 2VT 701 B 1 HETATM 12 N N13 2VT . . . F 3 3.393 28.742 -26.354 1 24.5 ? N13 2VT 701 B 1 HETATM 13 C C14 2VT . . . F 3 3.68 29.6 -27.459 1 25.9 ? C14 2VT 701 B 1 HETATM 14 C C15 2VT . . . F 3 4.123 30.94 -27.409 1 26.06 ? C15 2VT 701 B 1 HETATM 15 N N16 2VT . . . F 3 4.261 31.398 -28.623 1 27.33 ? N16 2VT 701 B 1 HETATM 16 N N17 2VT . . . F 3 3.915 30.382 -29.515 1 29.17 ? N17 2VT 701 B 1 HETATM 17 C C18 2VT . . . F 3 3.557 29.286 -28.782 1 26.9 ? C18 2VT 701 B 1 HETATM 18 C C19 2VT . . . F 3 3.933 30.514 -30.974 1 33.12 ? C19 2VT 701 B 1 HETATM 19 C C20 2VT . . . F 3 5.194 29.903 -31.519 1 37.94 ? C20 2VT 701 B 1 HETATM 20 C C21 2VT . . . F 3 6.342 30.68 -31.69 1 39.05 ? C21 2VT 701 B 1 HETATM 21 C C22 2VT . . . F 3 7.516 30.113 -32.182 1 39.75 ? C22 2VT 701 B 1 HETATM 22 C C23 2VT . . . F 3 7.547 28.757 -32.488 1 41.59 ? C23 2VT 701 B 1 HETATM 23 C C24 2VT . . . F 3 6.395 27.965 -32.315 1 42.3 ? C24 2VT 701 B 1 HETATM 24 C C25 2VT . . . F 3 5.212 28.55 -31.829 1 40.53 ? C25 2VT 701 B 1 HETATM 25 C C26 2VT . . . F 3 6.407 26.57 -32.641 1 44.6 ? C26 2VT 701 B 1 HETATM 26 N N27 2VT . . . F 3 6.405 25.462 -32.897 1 45.91 ? N27 2VT 701 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 26 #