data_4PPA
#
_model_server_result.job_id            AZvQ6kpNij3Pa9tI90YhXg 
_model_server_result.datetime_utc      '2024-11-24 15:03:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ppa 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":701}' 
#
_entry.id    4PPA 
#
_exptl.entry_id    4PPA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              408.415 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-[1-(3-cyanobenzyl)-1H-pyrazol-4-yl]-6-(1H-pyrazol-4-yl)-1H-indazole-3-carboxamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4PPA 
_cell.length_a            40.595 
_cell.length_b            94.153 
_cell.length_c            156.321 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4PPA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
PISA dimeric 2 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C 1 1 
B,D 2 1 
A,B,C,D 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C22 H16 N8 O' 
_chem_comp.formula_weight    408.415 
_chem_comp.id                2VU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-[1-(3-cyanobenzyl)-1H-pyrazol-4-yl]-6-(1H-pyrazol-4-yl)-1H-indazole-3-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N8 C7 2VU trip 1 n n 
C7 C5 2VU sing 2 n n 
N25 N27 2VU sing 3 n y 
N25 C24 2VU sing 4 n y 
N27 C18 2VU doub 5 n y 
C5 C4 2VU doub 6 n y 
C5 C6 2VU sing 7 n y 
C4 C3 2VU sing 8 n y 
C24 C23 2VU doub 9 n y 
C24 C19 2VU sing 10 n y 
C23 C22 2VU sing 11 n y 
C6 C1 2VU doub 12 n y 
C18 C19 2VU sing 13 n y 
C18 C16 2VU sing 14 n n 
N15 C16 2VU sing 15 n n 
N15 C12 2VU sing 16 n n 
C29 N30 2VU sing 17 n y 
C29 C28 2VU doub 18 n y 
C11 C12 2VU doub 19 n y 
C11 N10 2VU sing 20 n y 
C19 C20 2VU doub 21 n y 
C3 C9 2VU sing 22 n n 
C3 C2 2VU doub 23 n y 
C16 O17 2VU doub 24 n n 
C22 C28 2VU sing 25 n n 
C22 C21 2VU doub 26 n y 
N30 N32 2VU sing 27 n y 
C12 C13 2VU sing 28 n y 
C9 N10 2VU sing 29 n n 
C28 C33 2VU sing 30 n y 
C1 C2 2VU sing 31 n y 
N10 N14 2VU sing 32 n y 
C20 C21 2VU sing 33 n y 
N32 C33 2VU doub 34 n y 
C13 N14 2VU doub 35 n y 
C1 H1 2VU sing 36 n n 
C2 H2 2VU sing 37 n n 
C4 H3 2VU sing 38 n n 
C6 H4 2VU sing 39 n n 
C9 H5 2VU sing 40 n n 
C9 H6 2VU sing 41 n n 
C11 H7 2VU sing 42 n n 
C13 H8 2VU sing 43 n n 
N15 H9 2VU sing 44 n n 
C20 H10 2VU sing 45 n n 
C21 H11 2VU sing 46 n n 
C23 H12 2VU sing 47 n n 
N25 H13 2VU sing 48 n n 
C29 H14 2VU sing 49 n n 
N30 H15 2VU sing 50 n n 
C33 H16 2VU sing 51 n n 
#
_atom_sites.entry_id                     4PPA 
_atom_sites.fract_transf_matrix[1][1]    0.024634 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010621 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006397 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 2VU A 1 701 1 2VU DRG . 
D 2 2VU B 1 701 1 2VU DRG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 2VU . . . D 2 -28.591 -28.678 20.951 1 73.26 ? C1 2VU 701 B 1 
HETATM 2 C C2 2VU . . . D 2 -28.536 -27.395 20.413 1 71.11 ? C2 2VU 701 B 1 
HETATM 3 C C3 2VU . . . D 2 -28.929 -26.289 21.167 1 68.01 ? C3 2VU 701 B 1 
HETATM 4 C C4 2VU . . . D 2 -29.368 -26.457 22.476 1 68.33 ? C4 2VU 701 B 1 
HETATM 5 C C5 2VU . . . D 2 -29.43 -27.752 23.022 1 71.72 ? C5 2VU 701 B 1 
HETATM 6 C C6 2VU . . . D 2 -29.041 -28.862 22.25 1 73.12 ? C6 2VU 701 B 1 
HETATM 7 C C7 2VU . . . D 2 -29.896 -27.964 24.36 1 73.6 ? C7 2VU 701 B 1 
HETATM 8 N N8 2VU . . . D 2 -30.266 -28.143 25.419 1 74.6 ? N8 2VU 701 B 1 
HETATM 9 C C9 2VU . . . D 2 -28.836 -24.906 20.564 1 64.34 ? C9 2VU 701 B 1 
HETATM 10 N N10 2VU . . . D 2 -27.415 -24.585 20.42 1 60.52 ? N10 2VU 701 B 1 
HETATM 11 C C11 2VU . . . D 2 -26.584 -24.169 21.407 1 57.08 ? C11 2VU 701 B 1 
HETATM 12 C C12 2VU . . . D 2 -25.337 -24.021 20.885 1 56.81 ? C12 2VU 701 B 1 
HETATM 13 C C13 2VU . . . D 2 -25.422 -24.393 19.528 1 58.93 ? C13 2VU 701 B 1 
HETATM 14 N N14 2VU . . . D 2 -26.655 -24.736 19.256 1 61.07 ? N14 2VU 701 B 1 
HETATM 15 N N15 2VU . . . D 2 -24.189 -23.588 21.606 1 54.9 ? N15 2VU 701 B 1 
HETATM 16 C C16 2VU . . . D 2 -22.924 -23.545 21.111 1 54.92 ? C16 2VU 701 B 1 
HETATM 17 O O17 2VU . . . D 2 -22.681 -23.846 19.953 1 56.44 ? O17 2VU 701 B 1 
HETATM 18 C C18 2VU . . . D 2 -21.812 -23.095 21.97 1 54.58 ? C18 2VU 701 B 1 
HETATM 19 C C19 2VU . . . D 2 -20.46 -22.714 21.523 1 56.79 ? C19 2VU 701 B 1 
HETATM 20 C C20 2VU . . . D 2 -19.798 -22.684 20.286 1 59.34 ? C20 2VU 701 B 1 
HETATM 21 C C21 2VU . . . D 2 -18.498 -22.26 20.219 1 60.2 ? C21 2VU 701 B 1 
HETATM 22 C C22 2VU . . . D 2 -17.8 -21.868 21.382 1 60.01 ? C22 2VU 701 B 1 
HETATM 23 C C23 2VU . . . D 2 -18.456 -21.88 22.626 1 56.22 ? C23 2VU 701 B 1 
HETATM 24 C C24 2VU . . . D 2 -19.789 -22.305 22.702 1 54.82 ? C24 2VU 701 B 1 
HETATM 25 N N25 2VU . . . D 2 -20.709 -22.459 23.706 1 53.06 ? N25 2VU 701 B 1 
HETATM 26 N N27 2VU . . . D 2 -21.833 -22.91 23.271 1 53.23 ? N27 2VU 701 B 1 
HETATM 27 C C28 2VU . . . D 2 -16.413 -21.324 21.224 1 62.83 ? C28 2VU 701 B 1 
HETATM 28 C C29 2VU . . . D 2 -15.753 -20.49 22.086 1 62.78 ? C29 2VU 701 B 1 
HETATM 29 N N30 2VU . . . D 2 -14.562 -20.159 21.54 1 64.14 ? N30 2VU 701 B 1 
HETATM 30 N N32 2VU . . . D 2 -14.476 -20.779 20.287 1 65.63 ? N32 2VU 701 B 1 
HETATM 31 C C33 2VU . . . D 2 -15.583 -21.449 20.085 1 65.03 ? C33 2VU 701 B 1 
#
_model_server_stats.io_time_ms              66 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           31 
#