data_4PQF
#
_model_server_result.job_id            uwyDXFlSYNL468_fxhWhzA 
_model_server_result.datetime_utc      '2025-01-10 21:49:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4pqf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":402}' 
#
_entry.id    4PQF 
#
_exptl.entry_id    4PQF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4PQF 
_cell.length_a            106.96 
_cell.length_b            106.96 
_cell.length_c            70.81 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4PQF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     4PQF 
_atom_sites.fract_transf_matrix[1][1]    0.009349 
_atom_sites.fract_transf_matrix[1][2]    0.005398 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010796 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014122 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 401 400 GOL GOL . 
C 3 EDO A 1 402 700 EDO EDO . 
D 3 EDO A 1 403 701 EDO EDO . 
E 4 HOH A 1 501 500 HOH HOH . 
E 4 HOH A 2 502 502 HOH HOH . 
E 4 HOH A 3 503 503 HOH HOH . 
E 4 HOH A 4 504 506 HOH HOH . 
E 4 HOH A 5 505 508 HOH HOH . 
E 4 HOH A 6 506 510 HOH HOH . 
E 4 HOH A 7 507 511 HOH HOH . 
E 4 HOH A 8 508 512 HOH HOH . 
E 4 HOH A 9 509 513 HOH HOH . 
E 4 HOH A 10 510 514 HOH HOH . 
E 4 HOH A 11 511 515 HOH HOH . 
E 4 HOH A 12 512 516 HOH HOH . 
E 4 HOH A 13 513 518 HOH HOH . 
E 4 HOH A 14 514 521 HOH HOH . 
E 4 HOH A 15 515 522 HOH HOH . 
E 4 HOH A 16 516 524 HOH HOH . 
E 4 HOH A 17 517 525 HOH HOH . 
E 4 HOH A 18 518 526 HOH HOH . 
E 4 HOH A 19 519 527 HOH HOH . 
E 4 HOH A 20 520 529 HOH HOH . 
E 4 HOH A 21 521 530 HOH HOH . 
E 4 HOH A 22 522 531 HOH HOH . 
E 4 HOH A 23 523 532 HOH HOH . 
E 4 HOH A 24 524 534 HOH HOH . 
E 4 HOH A 25 525 535 HOH HOH . 
E 4 HOH A 26 526 536 HOH HOH . 
E 4 HOH A 27 527 538 HOH HOH . 
E 4 HOH A 28 528 539 HOH HOH . 
E 4 HOH A 29 529 540 HOH HOH . 
E 4 HOH A 30 530 541 HOH HOH . 
E 4 HOH A 31 531 542 HOH HOH . 
E 4 HOH A 32 532 543 HOH HOH . 
E 4 HOH A 33 533 544 HOH HOH . 
E 4 HOH A 34 534 546 HOH HOH . 
E 4 HOH A 35 535 547 HOH HOH . 
E 4 HOH A 36 536 549 HOH HOH . 
E 4 HOH A 37 537 550 HOH HOH . 
E 4 HOH A 38 538 551 HOH HOH . 
E 4 HOH A 39 539 552 HOH HOH . 
E 4 HOH A 40 540 553 HOH HOH . 
E 4 HOH A 41 541 554 HOH HOH . 
E 4 HOH A 42 542 555 HOH HOH . 
E 4 HOH A 43 543 556 HOH HOH . 
E 4 HOH A 44 544 557 HOH HOH . 
E 4 HOH A 45 545 558 HOH HOH . 
E 4 HOH A 46 546 559 HOH HOH . 
E 4 HOH A 47 547 560 HOH HOH . 
E 4 HOH A 48 548 561 HOH HOH . 
E 4 HOH A 49 549 562 HOH HOH . 
E 4 HOH A 50 550 563 HOH HOH . 
E 4 HOH A 51 551 564 HOH HOH . 
E 4 HOH A 52 552 565 HOH HOH . 
E 4 HOH A 53 553 566 HOH HOH . 
E 4 HOH A 54 554 567 HOH HOH . 
E 4 HOH A 55 555 568 HOH HOH . 
E 4 HOH A 56 556 569 HOH HOH . 
E 4 HOH A 57 557 571 HOH HOH . 
E 4 HOH A 58 558 572 HOH HOH . 
E 4 HOH A 59 559 573 HOH HOH . 
E 4 HOH A 60 560 574 HOH HOH . 
E 4 HOH A 61 561 575 HOH HOH . 
E 4 HOH A 62 562 578 HOH HOH . 
E 4 HOH A 63 563 580 HOH HOH . 
E 4 HOH A 64 564 581 HOH HOH . 
E 4 HOH A 65 565 582 HOH HOH . 
E 4 HOH A 66 566 583 HOH HOH . 
E 4 HOH A 67 567 584 HOH HOH . 
E 4 HOH A 68 568 585 HOH HOH . 
E 4 HOH A 69 569 586 HOH HOH . 
E 4 HOH A 70 570 587 HOH HOH . 
E 4 HOH A 71 571 588 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 3 48.459 -5.785 -26.2 1 62.43 ? C1 EDO 402 A 1 
HETATM 2 O O1 EDO . . . C 3 48.805 -4.436 -25.861 1 62.52 ? O1 EDO 402 A 1 
HETATM 3 C C2 EDO . . . C 3 47.41 -5.792 -27.312 1 61.89 ? C2 EDO 402 A 1 
HETATM 4 O O2 EDO . . . C 3 46.696 -7.036 -27.354 1 60.64 ? O2 EDO 402 A 1 
#
_model_server_stats.io_time_ms              90 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           330 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#