data_4PQI # _model_server_result.job_id GD4zR9ArVZE0zIjED5aDig _model_server_result.datetime_utc '2024-11-06 02:47:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4pqi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 4PQI # _exptl.entry_id 4PQI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4PQI _cell.length_a 41.524 _cell.length_b 77.013 _cell.length_c 82.636 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PQI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 41 A CYS 41 1_555 B SG2 GSH . A GSH 301 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.05 ? metalc ? metalc1 A O GLY 55 A GLY 55 1_555 E CA CA . A CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc2 A OE2 GLU 59 A GLU 59 1_555 E CA CA . A CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? metalc ? metalc3 A OE1 GLU 59 A GLU 59 1_555 E CA CA . A CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.529 ? metalc ? metalc4 A O LEU 161 A LEU 161 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.982 ? metalc ? metalc5 A O HIS 162 A HIS 162 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc6 A O PHE 164 A PHE 164 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc7 A OD2 ASP 165 A ASP 165 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? metalc ? metalc8 A OD1 ASP 165 A ASP 165 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? metalc ? metalc9 A O GLY 167 A GLY 167 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc10 C CA CA . A CA 302 1_555 F O HOH . A HOH 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? metalc ? metalc11 C CA CA . A CA 302 1_555 F O HOH . A HOH 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc12 C CA CA . A CA 302 1_555 F O HOH . A HOH 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc13 C CA CA . A CA 302 1_555 F O HOH . A HOH 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? metalc ? metalc14 D CA CA . A CA 303 1_555 F O HOH . A HOH 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.544 ? metalc ? metalc15 D CA CA . A CA 303 1_555 F O HOH . A HOH 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc16 D CA CA . A CA 303 1_555 F O HOH . A HOH 471 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc17 E CA CA . A CA 304 1_555 F O HOH . A HOH 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc18 E CA CA . A CA 304 1_555 F O HOH . A HOH 425 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? metalc ? metalc19 E CA CA . A CA 304 1_555 F O HOH . A HOH 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc20 E CA CA . A CA 304 1_555 F O HOH . A HOH 496 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4PQI _atom_sites.fract_transf_matrix[1][1] 0.024082 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012985 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012101 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GSH A 1 301 301 GSH GTT . C 3 CA A 1 302 302 CA CA . D 3 CA A 1 303 303 CA CA . E 3 CA A 1 304 304 CA CA . F 4 HOH A 1 401 2 HOH HOH . F 4 HOH A 2 402 3 HOH HOH . F 4 HOH A 3 403 4 HOH HOH . F 4 HOH A 4 404 5 HOH HOH . F 4 HOH A 5 405 6 HOH HOH . F 4 HOH A 6 406 7 HOH HOH . F 4 HOH A 7 407 8 HOH HOH . F 4 HOH A 8 408 9 HOH HOH . F 4 HOH A 9 409 10 HOH HOH . F 4 HOH A 10 410 11 HOH HOH . F 4 HOH A 11 411 12 HOH HOH . F 4 HOH A 12 412 13 HOH HOH . F 4 HOH A 13 413 14 HOH HOH . F 4 HOH A 14 414 15 HOH HOH . F 4 HOH A 15 415 16 HOH HOH . F 4 HOH A 16 416 17 HOH HOH . F 4 HOH A 17 417 18 HOH HOH . F 4 HOH A 18 418 19 HOH HOH . F 4 HOH A 19 419 20 HOH HOH . F 4 HOH A 20 420 21 HOH HOH . F 4 HOH A 21 421 22 HOH HOH . F 4 HOH A 22 422 23 HOH HOH . F 4 HOH A 23 423 24 HOH HOH . F 4 HOH A 24 424 25 HOH HOH . F 4 HOH A 25 425 26 HOH HOH . F 4 HOH A 26 426 28 HOH HOH . F 4 HOH A 27 427 29 HOH HOH . F 4 HOH A 28 428 30 HOH HOH . F 4 HOH A 29 429 31 HOH HOH . F 4 HOH A 30 430 32 HOH HOH . F 4 HOH A 31 431 33 HOH HOH . F 4 HOH A 32 432 34 HOH HOH . F 4 HOH A 33 433 35 HOH HOH . F 4 HOH A 34 434 36 HOH HOH . F 4 HOH A 35 435 37 HOH HOH . F 4 HOH A 36 436 38 HOH HOH . F 4 HOH A 37 437 39 HOH HOH . F 4 HOH A 38 438 40 HOH HOH . F 4 HOH A 39 439 41 HOH HOH . F 4 HOH A 40 440 42 HOH HOH . F 4 HOH A 41 441 43 HOH HOH . F 4 HOH A 42 442 44 HOH HOH . F 4 HOH A 43 443 45 HOH HOH . F 4 HOH A 44 444 46 HOH HOH . F 4 HOH A 45 445 47 HOH HOH . F 4 HOH A 46 446 48 HOH HOH . F 4 HOH A 47 447 49 HOH HOH . F 4 HOH A 48 448 51 HOH HOH . F 4 HOH A 49 449 52 HOH HOH . F 4 HOH A 50 450 53 HOH HOH . F 4 HOH A 51 451 54 HOH HOH . F 4 HOH A 52 452 55 HOH HOH . F 4 HOH A 53 453 56 HOH HOH . F 4 HOH A 54 454 57 HOH HOH . F 4 HOH A 55 455 58 HOH HOH . F 4 HOH A 56 456 59 HOH HOH . F 4 HOH A 57 457 60 HOH HOH . F 4 HOH A 58 458 61 HOH HOH . F 4 HOH A 59 459 62 HOH HOH . F 4 HOH A 60 460 63 HOH HOH . F 4 HOH A 61 461 64 HOH HOH . F 4 HOH A 62 462 65 HOH HOH . F 4 HOH A 63 463 66 HOH HOH . F 4 HOH A 64 464 67 HOH HOH . F 4 HOH A 65 465 68 HOH HOH . F 4 HOH A 66 466 69 HOH HOH . F 4 HOH A 67 467 70 HOH HOH . F 4 HOH A 68 468 72 HOH HOH . F 4 HOH A 69 469 73 HOH HOH . F 4 HOH A 70 470 74 HOH HOH . F 4 HOH A 71 471 75 HOH HOH . F 4 HOH A 72 472 76 HOH HOH . F 4 HOH A 73 473 77 HOH HOH . F 4 HOH A 74 474 78 HOH HOH . F 4 HOH A 75 475 79 HOH HOH . F 4 HOH A 76 476 80 HOH HOH . F 4 HOH A 77 477 81 HOH HOH . F 4 HOH A 78 478 82 HOH HOH . F 4 HOH A 79 479 83 HOH HOH . F 4 HOH A 80 480 84 HOH HOH . F 4 HOH A 81 481 85 HOH HOH . F 4 HOH A 82 482 86 HOH HOH . F 4 HOH A 83 483 87 HOH HOH . F 4 HOH A 84 484 88 HOH HOH . F 4 HOH A 85 485 89 HOH HOH . F 4 HOH A 86 486 91 HOH HOH . F 4 HOH A 87 487 92 HOH HOH . F 4 HOH A 88 488 93 HOH HOH . F 4 HOH A 89 489 94 HOH HOH . F 4 HOH A 90 490 96 HOH HOH . F 4 HOH A 91 491 97 HOH HOH . F 4 HOH A 92 492 98 HOH HOH . F 4 HOH A 93 493 99 HOH HOH . F 4 HOH A 94 494 100 HOH HOH . F 4 HOH A 95 495 101 HOH HOH . F 4 HOH A 96 496 102 HOH HOH . F 4 HOH A 97 497 103 HOH HOH . F 4 HOH A 98 498 104 HOH HOH . F 4 HOH A 99 499 105 HOH HOH . F 4 HOH A 100 500 106 HOH HOH . F 4 HOH A 101 501 107 HOH HOH . F 4 HOH A 102 502 108 HOH HOH . F 4 HOH A 103 503 110 HOH HOH . F 4 HOH A 104 504 111 HOH HOH . F 4 HOH A 105 505 112 HOH HOH . F 4 HOH A 106 506 114 HOH HOH . F 4 HOH A 107 507 115 HOH HOH . F 4 HOH A 108 508 116 HOH HOH . F 4 HOH A 109 509 118 HOH HOH . F 4 HOH A 110 510 119 HOH HOH . F 4 HOH A 111 511 120 HOH HOH . F 4 HOH A 112 512 121 HOH HOH . F 4 HOH A 113 513 122 HOH HOH . F 4 HOH A 114 514 123 HOH HOH . F 4 HOH A 115 515 124 HOH HOH . F 4 HOH A 116 516 126 HOH HOH . F 4 HOH A 117 517 127 HOH HOH . F 4 HOH A 118 518 131 HOH HOH . F 4 HOH A 119 519 132 HOH HOH . F 4 HOH A 120 520 133 HOH HOH . F 4 HOH A 121 521 135 HOH HOH . F 4 HOH A 122 522 137 HOH HOH . F 4 HOH A 123 523 138 HOH HOH . F 4 HOH A 124 524 140 HOH HOH . F 4 HOH A 125 525 144 HOH HOH . F 4 HOH A 126 526 145 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -4.073 _atom_site.Cartn_y 14.371 _atom_site.Cartn_z 29.282 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 42.38 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 303 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 246 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #