data_4PQI
#
_model_server_result.job_id            hLtd81ZaQUCENAYzk5HnbQ 
_model_server_result.datetime_utc      '2024-11-24 14:07:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4pqi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":303}' 
#
_entry.id    4PQI 
#
_exptl.entry_id    4PQI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4PQI 
_cell.length_a            41.524 
_cell.length_b            77.013 
_cell.length_c            82.636 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4PQI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 41 A CYS 41 1_555 B SG2 GSH . A GSH 301 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.05 ? 
metalc ? metalc1 A O GLY 55 A GLY 55 1_555 E CA CA . A CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? 
metalc ? metalc2 A OE2 GLU 59 A GLU 59 1_555 E CA CA . A CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? 
metalc ? metalc3 A OE1 GLU 59 A GLU 59 1_555 E CA CA . A CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.529 ? 
metalc ? metalc4 A O LEU 161 A LEU 161 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.982 ? 
metalc ? metalc5 A O HIS 162 A HIS 162 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? 
metalc ? metalc6 A O PHE 164 A PHE 164 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? 
metalc ? metalc7 A OD2 ASP 165 A ASP 165 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? 
metalc ? metalc8 A OD1 ASP 165 A ASP 165 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? 
metalc ? metalc9 A O GLY 167 A GLY 167 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? 
metalc ? metalc10 C CA CA . A CA 302 1_555 F O HOH . A HOH 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? 
metalc ? metalc11 C CA CA . A CA 302 1_555 F O HOH . A HOH 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? 
metalc ? metalc12 C CA CA . A CA 302 1_555 F O HOH . A HOH 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? 
metalc ? metalc13 C CA CA . A CA 302 1_555 F O HOH . A HOH 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? 
metalc ? metalc14 D CA CA . A CA 303 1_555 F O HOH . A HOH 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.544 ? 
metalc ? metalc15 D CA CA . A CA 303 1_555 F O HOH . A HOH 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? 
metalc ? metalc16 D CA CA . A CA 303 1_555 F O HOH . A HOH 471 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? 
metalc ? metalc17 E CA CA . A CA 304 1_555 F O HOH . A HOH 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? 
metalc ? metalc18 E CA CA . A CA 304 1_555 F O HOH . A HOH 425 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? 
metalc ? metalc19 E CA CA . A CA 304 1_555 F O HOH . A HOH 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? 
metalc ? metalc20 E CA CA . A CA 304 1_555 F O HOH . A HOH 496 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4PQI 
_atom_sites.fract_transf_matrix[1][1]    0.024082 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012985 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012101 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GSH A 1 301 301 GSH GTT . 
C 3 CA A 1 302 302 CA CA . 
D 3 CA A 1 303 303 CA CA . 
E 3 CA A 1 304 304 CA CA . 
F 4 HOH A 1 401 2 HOH HOH . 
F 4 HOH A 2 402 3 HOH HOH . 
F 4 HOH A 3 403 4 HOH HOH . 
F 4 HOH A 4 404 5 HOH HOH . 
F 4 HOH A 5 405 6 HOH HOH . 
F 4 HOH A 6 406 7 HOH HOH . 
F 4 HOH A 7 407 8 HOH HOH . 
F 4 HOH A 8 408 9 HOH HOH . 
F 4 HOH A 9 409 10 HOH HOH . 
F 4 HOH A 10 410 11 HOH HOH . 
F 4 HOH A 11 411 12 HOH HOH . 
F 4 HOH A 12 412 13 HOH HOH . 
F 4 HOH A 13 413 14 HOH HOH . 
F 4 HOH A 14 414 15 HOH HOH . 
F 4 HOH A 15 415 16 HOH HOH . 
F 4 HOH A 16 416 17 HOH HOH . 
F 4 HOH A 17 417 18 HOH HOH . 
F 4 HOH A 18 418 19 HOH HOH . 
F 4 HOH A 19 419 20 HOH HOH . 
F 4 HOH A 20 420 21 HOH HOH . 
F 4 HOH A 21 421 22 HOH HOH . 
F 4 HOH A 22 422 23 HOH HOH . 
F 4 HOH A 23 423 24 HOH HOH . 
F 4 HOH A 24 424 25 HOH HOH . 
F 4 HOH A 25 425 26 HOH HOH . 
F 4 HOH A 26 426 28 HOH HOH . 
F 4 HOH A 27 427 29 HOH HOH . 
F 4 HOH A 28 428 30 HOH HOH . 
F 4 HOH A 29 429 31 HOH HOH . 
F 4 HOH A 30 430 32 HOH HOH . 
F 4 HOH A 31 431 33 HOH HOH . 
F 4 HOH A 32 432 34 HOH HOH . 
F 4 HOH A 33 433 35 HOH HOH . 
F 4 HOH A 34 434 36 HOH HOH . 
F 4 HOH A 35 435 37 HOH HOH . 
F 4 HOH A 36 436 38 HOH HOH . 
F 4 HOH A 37 437 39 HOH HOH . 
F 4 HOH A 38 438 40 HOH HOH . 
F 4 HOH A 39 439 41 HOH HOH . 
F 4 HOH A 40 440 42 HOH HOH . 
F 4 HOH A 41 441 43 HOH HOH . 
F 4 HOH A 42 442 44 HOH HOH . 
F 4 HOH A 43 443 45 HOH HOH . 
F 4 HOH A 44 444 46 HOH HOH . 
F 4 HOH A 45 445 47 HOH HOH . 
F 4 HOH A 46 446 48 HOH HOH . 
F 4 HOH A 47 447 49 HOH HOH . 
F 4 HOH A 48 448 51 HOH HOH . 
F 4 HOH A 49 449 52 HOH HOH . 
F 4 HOH A 50 450 53 HOH HOH . 
F 4 HOH A 51 451 54 HOH HOH . 
F 4 HOH A 52 452 55 HOH HOH . 
F 4 HOH A 53 453 56 HOH HOH . 
F 4 HOH A 54 454 57 HOH HOH . 
F 4 HOH A 55 455 58 HOH HOH . 
F 4 HOH A 56 456 59 HOH HOH . 
F 4 HOH A 57 457 60 HOH HOH . 
F 4 HOH A 58 458 61 HOH HOH . 
F 4 HOH A 59 459 62 HOH HOH . 
F 4 HOH A 60 460 63 HOH HOH . 
F 4 HOH A 61 461 64 HOH HOH . 
F 4 HOH A 62 462 65 HOH HOH . 
F 4 HOH A 63 463 66 HOH HOH . 
F 4 HOH A 64 464 67 HOH HOH . 
F 4 HOH A 65 465 68 HOH HOH . 
F 4 HOH A 66 466 69 HOH HOH . 
F 4 HOH A 67 467 70 HOH HOH . 
F 4 HOH A 68 468 72 HOH HOH . 
F 4 HOH A 69 469 73 HOH HOH . 
F 4 HOH A 70 470 74 HOH HOH . 
F 4 HOH A 71 471 75 HOH HOH . 
F 4 HOH A 72 472 76 HOH HOH . 
F 4 HOH A 73 473 77 HOH HOH . 
F 4 HOH A 74 474 78 HOH HOH . 
F 4 HOH A 75 475 79 HOH HOH . 
F 4 HOH A 76 476 80 HOH HOH . 
F 4 HOH A 77 477 81 HOH HOH . 
F 4 HOH A 78 478 82 HOH HOH . 
F 4 HOH A 79 479 83 HOH HOH . 
F 4 HOH A 80 480 84 HOH HOH . 
F 4 HOH A 81 481 85 HOH HOH . 
F 4 HOH A 82 482 86 HOH HOH . 
F 4 HOH A 83 483 87 HOH HOH . 
F 4 HOH A 84 484 88 HOH HOH . 
F 4 HOH A 85 485 89 HOH HOH . 
F 4 HOH A 86 486 91 HOH HOH . 
F 4 HOH A 87 487 92 HOH HOH . 
F 4 HOH A 88 488 93 HOH HOH . 
F 4 HOH A 89 489 94 HOH HOH . 
F 4 HOH A 90 490 96 HOH HOH . 
F 4 HOH A 91 491 97 HOH HOH . 
F 4 HOH A 92 492 98 HOH HOH . 
F 4 HOH A 93 493 99 HOH HOH . 
F 4 HOH A 94 494 100 HOH HOH . 
F 4 HOH A 95 495 101 HOH HOH . 
F 4 HOH A 96 496 102 HOH HOH . 
F 4 HOH A 97 497 103 HOH HOH . 
F 4 HOH A 98 498 104 HOH HOH . 
F 4 HOH A 99 499 105 HOH HOH . 
F 4 HOH A 100 500 106 HOH HOH . 
F 4 HOH A 101 501 107 HOH HOH . 
F 4 HOH A 102 502 108 HOH HOH . 
F 4 HOH A 103 503 110 HOH HOH . 
F 4 HOH A 104 504 111 HOH HOH . 
F 4 HOH A 105 505 112 HOH HOH . 
F 4 HOH A 106 506 114 HOH HOH . 
F 4 HOH A 107 507 115 HOH HOH . 
F 4 HOH A 108 508 116 HOH HOH . 
F 4 HOH A 109 509 118 HOH HOH . 
F 4 HOH A 110 510 119 HOH HOH . 
F 4 HOH A 111 511 120 HOH HOH . 
F 4 HOH A 112 512 121 HOH HOH . 
F 4 HOH A 113 513 122 HOH HOH . 
F 4 HOH A 114 514 123 HOH HOH . 
F 4 HOH A 115 515 124 HOH HOH . 
F 4 HOH A 116 516 126 HOH HOH . 
F 4 HOH A 117 517 127 HOH HOH . 
F 4 HOH A 118 518 131 HOH HOH . 
F 4 HOH A 119 519 132 HOH HOH . 
F 4 HOH A 120 520 133 HOH HOH . 
F 4 HOH A 121 521 135 HOH HOH . 
F 4 HOH A 122 522 137 HOH HOH . 
F 4 HOH A 123 523 138 HOH HOH . 
F 4 HOH A 124 524 140 HOH HOH . 
F 4 HOH A 125 525 144 HOH HOH . 
F 4 HOH A 126 526 145 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -4.073 
_atom_site.Cartn_y               14.371 
_atom_site.Cartn_z               29.282 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        42.38 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           303 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           226 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#