data_4PQR
#
_model_server_result.job_id            VfSkYhjYjGF1RlmBNeIS5Q 
_model_server_result.datetime_utc      '2025-01-10 18:16:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4pqr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
#
_entry.id    4PQR 
#
_exptl.entry_id    4PQR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4PQR 
_cell.length_a            106.83 
_cell.length_b            106.83 
_cell.length_c            70.49 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4PQR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 138 n n 
C1 C2 GOL sing 139 n n 
C1 H11 GOL sing 140 n n 
C1 H12 GOL sing 141 n n 
O1 HO1 GOL sing 142 n n 
C2 O2 GOL sing 143 n n 
C2 C3 GOL sing 144 n n 
C2 H2 GOL sing 145 n n 
O2 HO2 GOL sing 146 n n 
C3 O3 GOL sing 147 n n 
C3 H31 GOL sing 148 n n 
C3 H32 GOL sing 149 n n 
O3 HO3 GOL sing 150 n n 
#
_atom_sites.entry_id                     4PQR 
_atom_sites.fract_transf_matrix[1][1]    0.009361 
_atom_sites.fract_transf_matrix[1][2]    0.005404 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010809 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014186 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 401 400 GOL GOL . 
C 3 EDO A 1 402 701 EDO EDO . 
D 4 HOH A 1 501 500 HOH HOH . 
D 4 HOH A 2 502 501 HOH HOH . 
D 4 HOH A 3 503 502 HOH HOH . 
D 4 HOH A 4 504 503 HOH HOH . 
D 4 HOH A 5 505 504 HOH HOH . 
D 4 HOH A 6 506 506 HOH HOH . 
D 4 HOH A 7 507 507 HOH HOH . 
D 4 HOH A 8 508 508 HOH HOH . 
D 4 HOH A 9 509 509 HOH HOH . 
D 4 HOH A 10 510 510 HOH HOH . 
D 4 HOH A 11 511 511 HOH HOH . 
D 4 HOH A 12 512 514 HOH HOH . 
D 4 HOH A 13 513 515 HOH HOH . 
D 4 HOH A 14 514 516 HOH HOH . 
D 4 HOH A 15 515 517 HOH HOH . 
D 4 HOH A 16 516 518 HOH HOH . 
D 4 HOH A 17 517 521 HOH HOH . 
D 4 HOH A 18 518 522 HOH HOH . 
D 4 HOH A 19 519 523 HOH HOH . 
D 4 HOH A 20 520 524 HOH HOH . 
D 4 HOH A 21 521 525 HOH HOH . 
D 4 HOH A 22 522 526 HOH HOH . 
D 4 HOH A 23 523 527 HOH HOH . 
D 4 HOH A 24 524 528 HOH HOH . 
D 4 HOH A 25 525 529 HOH HOH . 
D 4 HOH A 26 526 530 HOH HOH . 
D 4 HOH A 27 527 531 HOH HOH . 
D 4 HOH A 28 528 532 HOH HOH . 
D 4 HOH A 29 529 533 HOH HOH . 
D 4 HOH A 30 530 534 HOH HOH . 
D 4 HOH A 31 531 535 HOH HOH . 
D 4 HOH A 32 532 536 HOH HOH . 
D 4 HOH A 33 533 537 HOH HOH . 
D 4 HOH A 34 534 538 HOH HOH . 
D 4 HOH A 35 535 539 HOH HOH . 
D 4 HOH A 36 536 540 HOH HOH . 
D 4 HOH A 37 537 541 HOH HOH . 
D 4 HOH A 38 538 544 HOH HOH . 
D 4 HOH A 39 539 545 HOH HOH . 
D 4 HOH A 40 540 546 HOH HOH . 
D 4 HOH A 41 541 547 HOH HOH . 
D 4 HOH A 42 542 548 HOH HOH . 
D 4 HOH A 43 543 549 HOH HOH . 
D 4 HOH A 44 544 550 HOH HOH . 
D 4 HOH A 45 545 551 HOH HOH . 
D 4 HOH A 46 546 552 HOH HOH . 
D 4 HOH A 47 547 553 HOH HOH . 
D 4 HOH A 48 548 554 HOH HOH . 
D 4 HOH A 49 549 555 HOH HOH . 
D 4 HOH A 50 550 556 HOH HOH . 
D 4 HOH A 51 551 557 HOH HOH . 
D 4 HOH A 52 552 558 HOH HOH . 
D 4 HOH A 53 553 559 HOH HOH . 
D 4 HOH A 54 554 560 HOH HOH . 
D 4 HOH A 55 555 561 HOH HOH . 
D 4 HOH A 56 556 562 HOH HOH . 
D 4 HOH A 57 557 563 HOH HOH . 
D 4 HOH A 58 558 564 HOH HOH . 
D 4 HOH A 59 559 565 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . B 2 20.596 18.168 -9.784 1 53.08 ? C1 GOL 401 A 1 
HETATM 2 O O1 GOL . . . B 2 21.309 19.412 -9.746 1 51.86 ? O1 GOL 401 A 1 
HETATM 3 C C2 GOL . . . B 2 20.001 17.886 -8.407 1 52.69 ? C2 GOL 401 A 1 
HETATM 4 O O2 GOL . . . B 2 18.786 18.618 -8.234 1 51.85 ? O2 GOL 401 A 1 
HETATM 5 C C3 GOL . . . B 2 19.779 16.387 -8.202 1 53.03 ? C3 GOL 401 A 1 
HETATM 6 O O3 GOL . . . B 2 18.584 16.126 -7.458 1 51.13 ? O3 GOL 401 A 1 
#
_model_server_stats.io_time_ms              51 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           326 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           6 
#