data_4PR0 # _model_server_result.job_id tCjSyAgasif-0TjZazcrMg _model_server_result.datetime_utc '2025-01-10 21:51:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4pr0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4PR0 # _exptl.entry_id 4PR0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4PR0 _cell.length_a 107.04 _cell.length_b 107.04 _cell.length_c 71.31 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PR0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id NA _struct_conn.ptnr1_label_comp_id NA _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id NA _struct_conn.ptnr1_auth_seq_id 401 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id G _struct_conn.ptnr2_label_atom_id O _struct_conn.ptnr2_label_comp_id HOH _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id HOH _struct_conn.ptnr2_auth_seq_id 554 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.43 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4PR0 _atom_sites.fract_transf_matrix[1][1] 0.009342 _atom_sites.fract_transf_matrix[1][2] 0.005394 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010788 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014023 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 401 800 NA NA . C 3 EDO A 1 402 700 EDO EDO . D 3 EDO A 1 403 701 EDO EDO . E 4 GOL A 1 404 400 GOL GOL . F 3 EDO A 1 405 702 EDO EDO . G 5 HOH A 1 501 500 HOH HOH . G 5 HOH A 2 502 501 HOH HOH . G 5 HOH A 3 503 502 HOH HOH . G 5 HOH A 4 504 503 HOH HOH . G 5 HOH A 5 505 504 HOH HOH . G 5 HOH A 6 506 505 HOH HOH . G 5 HOH A 7 507 506 HOH HOH . G 5 HOH A 8 508 507 HOH HOH . G 5 HOH A 9 509 508 HOH HOH . G 5 HOH A 10 510 509 HOH HOH . G 5 HOH A 11 511 510 HOH HOH . G 5 HOH A 12 512 511 HOH HOH . G 5 HOH A 13 513 512 HOH HOH . G 5 HOH A 14 514 513 HOH HOH . G 5 HOH A 15 515 514 HOH HOH . G 5 HOH A 16 516 516 HOH HOH . G 5 HOH A 17 517 517 HOH HOH . G 5 HOH A 18 518 518 HOH HOH . G 5 HOH A 19 519 519 HOH HOH . G 5 HOH A 20 520 520 HOH HOH . G 5 HOH A 21 521 521 HOH HOH . G 5 HOH A 22 522 522 HOH HOH . G 5 HOH A 23 523 523 HOH HOH . G 5 HOH A 24 524 524 HOH HOH . G 5 HOH A 25 525 526 HOH HOH . G 5 HOH A 26 526 527 HOH HOH . G 5 HOH A 27 527 528 HOH HOH . G 5 HOH A 28 528 529 HOH HOH . G 5 HOH A 29 529 530 HOH HOH . G 5 HOH A 30 530 531 HOH HOH . G 5 HOH A 31 531 532 HOH HOH . G 5 HOH A 32 532 533 HOH HOH . G 5 HOH A 33 533 534 HOH HOH . G 5 HOH A 34 534 535 HOH HOH . G 5 HOH A 35 535 537 HOH HOH . G 5 HOH A 36 536 538 HOH HOH . G 5 HOH A 37 537 539 HOH HOH . G 5 HOH A 38 538 540 HOH HOH . G 5 HOH A 39 539 541 HOH HOH . G 5 HOH A 40 540 542 HOH HOH . G 5 HOH A 41 541 543 HOH HOH . G 5 HOH A 42 542 544 HOH HOH . G 5 HOH A 43 543 545 HOH HOH . G 5 HOH A 44 544 546 HOH HOH . G 5 HOH A 45 545 547 HOH HOH . G 5 HOH A 46 546 548 HOH HOH . G 5 HOH A 47 547 549 HOH HOH . G 5 HOH A 48 548 550 HOH HOH . G 5 HOH A 49 549 551 HOH HOH . G 5 HOH A 50 550 553 HOH HOH . G 5 HOH A 51 551 554 HOH HOH . G 5 HOH A 52 552 555 HOH HOH . G 5 HOH A 53 553 556 HOH HOH . G 5 HOH A 54 554 557 HOH HOH . G 5 HOH A 55 555 558 HOH HOH . G 5 HOH A 56 556 559 HOH HOH . G 5 HOH A 57 557 561 HOH HOH . G 5 HOH A 58 558 562 HOH HOH . G 5 HOH A 59 559 563 HOH HOH . G 5 HOH A 60 560 564 HOH HOH . G 5 HOH A 61 561 567 HOH HOH . G 5 HOH A 62 562 568 HOH HOH . G 5 HOH A 63 563 569 HOH HOH . G 5 HOH A 64 564 570 HOH HOH . G 5 HOH A 65 565 571 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 1.361 _atom_site.Cartn_y 30.109 _atom_site.Cartn_z 9.602 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 55.4 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #