data_4PR9
#
_model_server_result.job_id            XuJbfrPbS_SfF70Gf5WyOw 
_model_server_result.datetime_utc      '2024-11-04 20:34:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4pr9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":1102}' 
#
_entry.id    4PR9 
#
_exptl.entry_id    4PR9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4PR9 
_cell.length_a            102.579 
_cell.length_b            102.579 
_cell.length_c            190.772 
_cell.Z_PDB               36 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4PR9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        153 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 32 1 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
? dimeric 2 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,G,H,I,M,N 1 1 
C,D,J,O,P 2 1 
E,F,K,L,Q 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 I N N 
? 3 J N N 
? 3 L N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     4PR9 
_atom_sites.fract_transf_matrix[1][1]    0.009749 
_atom_sites.fract_transf_matrix[1][2]    0.005628 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011257 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005242 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 PIO A 1 1101 1 PIO PIO . 
H 2 PIO B 1 1101 1 PIO PIO . 
I 3 GOL B 1 1102 1 GOL GOL . 
J 3 GOL C 1 1101 3 GOL GOL . 
K 2 PIO E 1 1101 1 PIO PIO . 
L 3 GOL F 1 1101 2 GOL GOL . 
M 4 HOH A 1 1201 1 HOH HOH . 
M 4 HOH A 2 1202 2 HOH HOH . 
M 4 HOH A 3 1203 7 HOH HOH . 
M 4 HOH A 4 1204 8 HOH HOH . 
M 4 HOH A 5 1205 22 HOH HOH . 
M 4 HOH A 6 1206 23 HOH HOH . 
M 4 HOH A 7 1207 29 HOH HOH . 
N 4 HOH B 1 1201 4 HOH HOH . 
N 4 HOH B 2 1202 5 HOH HOH . 
N 4 HOH B 3 1203 6 HOH HOH . 
N 4 HOH B 4 1204 9 HOH HOH . 
N 4 HOH B 5 1205 10 HOH HOH . 
N 4 HOH B 6 1206 11 HOH HOH . 
N 4 HOH B 7 1207 16 HOH HOH . 
N 4 HOH B 8 1208 17 HOH HOH . 
N 4 HOH B 9 1209 19 HOH HOH . 
N 4 HOH B 10 1210 20 HOH HOH . 
N 4 HOH B 11 1211 21 HOH HOH . 
N 4 HOH B 12 1212 24 HOH HOH . 
N 4 HOH B 13 1213 26 HOH HOH . 
N 4 HOH B 14 1214 28 HOH HOH . 
N 4 HOH B 15 1215 33 HOH HOH . 
N 4 HOH B 16 1216 36 HOH HOH . 
N 4 HOH B 17 1217 37 HOH HOH . 
N 4 HOH B 18 1218 39 HOH HOH . 
O 4 HOH C 1 1201 13 HOH HOH . 
O 4 HOH C 2 1202 14 HOH HOH . 
O 4 HOH C 3 1203 34 HOH HOH . 
O 4 HOH C 4 1204 38 HOH HOH . 
O 4 HOH C 5 1205 40 HOH HOH . 
P 4 HOH D 1 1101 3 HOH HOH . 
P 4 HOH D 2 1102 15 HOH HOH . 
P 4 HOH D 3 1103 18 HOH HOH . 
P 4 HOH D 4 1104 25 HOH HOH . 
P 4 HOH D 5 1105 27 HOH HOH . 
P 4 HOH D 6 1106 30 HOH HOH . 
P 4 HOH D 7 1107 31 HOH HOH . 
P 4 HOH D 8 1108 32 HOH HOH . 
P 4 HOH D 9 1109 35 HOH HOH . 
Q 4 HOH F 1 1201 12 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . I 3 49.736 54.876 114.034 1 177.08 ? C1 GOL 1102 B 1 
HETATM 2 O O1 GOL . . . I 3 49.063 53.642 114.253 1 176.25 ? O1 GOL 1102 B 1 
HETATM 3 C C2 GOL . . . I 3 49.024 55.712 112.993 1 177.64 ? C2 GOL 1102 B 1 
HETATM 4 O O2 GOL . . . I 3 47.693 56.011 113.433 1 178.47 ? O2 GOL 1102 B 1 
HETATM 5 C C3 GOL . . . I 3 49.779 57 112.755 1 176.24 ? C3 GOL 1102 B 1 
HETATM 6 O O3 GOL . . . I 3 48.992 57.917 112.004 1 175.12 ? O3 GOL 1102 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           331 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#