data_4PRG # _model_server_result.job_id dxPltaoQXlwGQogcaCsGug _model_server_result.datetime_utc '2024-12-21 16:26:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4prg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":2}' # _entry.id 4PRG # _exptl.entry_id 4PRG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 614.837 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (+/-)(2S,5S)-3-(4-(4-CARBOXYPHENYL)BUTYL)-2-HEPTYL-4-OXO-5-THIAZOLIDINE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.57 _cell.angle_gamma 90 _cell.entry_id 4PRG _cell.length_a 92.72 _cell.length_b 61.54 _cell.length_c 118.81 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PRG _symmetry.cell_setting ? _symmetry.Int_Tables_number 3 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C37 H46 N2 O4 S' _chem_comp.formula_weight 614.837 _chem_comp.id 072 _chem_comp.mon_nstd_flag . _chem_comp.name (+/-)(2S,5S)-3-(4-(4-CARBOXYPHENYL)BUTYL)-2-HEPTYL-4-OXO-5-THIAZOLIDINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms THIAZOLIDINONE;GW0072 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S1B C1B 072 sing 1 n n S1B C2A 072 sing 2 n n C1A C1B 072 sing 3 n n C1A O1A 072 doub 4 n n C1A N3A 072 sing 5 n n C1B C1C 072 sing 6 n n C1B H1B 072 sing 7 n n C1C C1D 072 sing 8 n n C1C H1C1 072 sing 9 n n C1C H1C2 072 sing 10 n n C1D O1D 072 doub 11 n n C1D N4A 072 sing 12 n n C2A C2B 072 sing 13 n n C2A N3A 072 sing 14 n n C2A H2A 072 sing 15 n n C2B C2C 072 sing 16 n n C2B H2B1 072 sing 17 n n C2B H2B2 072 sing 18 n n C2C C2D 072 sing 19 n n C2C H2C1 072 sing 20 n n C2C H2C2 072 sing 21 n n C2D C2E 072 sing 22 n n C2D H2D1 072 sing 23 n n C2D H2D2 072 sing 24 n n C2E C2F 072 sing 25 n n C2E H2E1 072 sing 26 n n C2E H2E2 072 sing 27 n n C2F C2G 072 sing 28 n n C2F H2F1 072 sing 29 n n C2F H2F2 072 sing 30 n n C2G C2H 072 sing 31 n n C2G H2G1 072 sing 32 n n C2G H2G2 072 sing 33 n n C2H H2H1 072 sing 34 n n C2H H2H2 072 sing 35 n n C2H H2H3 072 sing 36 n n N3A C3B 072 sing 37 n n C3B C3C 072 sing 38 n n C3B H3B1 072 sing 39 n n C3B H3B2 072 sing 40 n n C3C C3D 072 sing 41 n n C3C H3C1 072 sing 42 n n C3C H3C2 072 sing 43 n n C3D C3E 072 sing 44 n n C3D H3D1 072 sing 45 n n C3D H3D2 072 sing 46 n n C3E C3F 072 sing 47 n n C3E H3E1 072 sing 48 n n C3E H3E2 072 sing 49 n n C3F C3G 072 doub 50 n y C3F C3H 072 sing 51 n y C3G C3I 072 sing 52 n y C3G H3G 072 sing 53 n n C3H C3J 072 doub 54 n y C3H H3H 072 sing 55 n n C3I C3K 072 doub 56 n y C3I H3I 072 sing 57 n n C3J C3K 072 sing 58 n y C3J H3J 072 sing 59 n n C3K C3L 072 sing 60 n n C3L O3M 072 sing 61 n n C3L O3N 072 doub 62 n n O3M HOM3 072 sing 63 n n N4A C4B 072 sing 64 n n N4A C5B 072 sing 65 n n C4B C4C 072 sing 66 n n C4B H4B1 072 sing 67 n n C4B H4B2 072 sing 68 n n C4C C4E 072 doub 69 n y C4C C4D 072 sing 70 n y C4E C4G 072 sing 71 n y C4E H4E 072 sing 72 n n C4D C4F 072 doub 73 n y C4D H4D 072 sing 74 n n C4G C4H 072 doub 75 n y C4G H4G 072 sing 76 n n C4F C4H 072 sing 77 n y C4F H4F 072 sing 78 n n C4H H4H 072 sing 79 n n C5B C5C 072 sing 80 n n C5B H5B1 072 sing 81 n n C5B H5B2 072 sing 82 n n C5C C5D 072 doub 83 n y C5C C5E 072 sing 84 n y C5D C5F 072 sing 85 n y C5D H5D 072 sing 86 n n C5E C5G 072 doub 87 n y C5E H5E 072 sing 88 n n C5F C5H 072 doub 89 n y C5F H5F 072 sing 90 n n C5G C5H 072 sing 91 n y C5G H5G 072 sing 92 n n C5H H5H 072 sing 93 n n # _atom_sites.entry_id 4PRG _atom_sites.fract_transf_matrix[1][1] 0.010785 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002405 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016249 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008623 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 72 A 1 1 1 72 72 . F 2 72 B 1 2 2 72 72 . G 2 72 C 1 3 3 72 72 . H 2 72 D 1 4 4 72 72 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1B 072 . . . F 2 35.32 36.394 42.516 1 20.89 ? S1B 072 2 B 1 HETATM 2 C C1A 072 . . . F 2 37.766 35.074 43.081 1 21.05 ? C1A 072 2 B 1 HETATM 3 C C1B 072 . . . F 2 36.261 34.758 42.601 1 20.52 ? C1B 072 2 B 1 HETATM 4 O O1A 072 . . . F 2 38.537 34.132 43.434 1 17.22 ? O1A 072 2 B 1 HETATM 5 C C1C 072 . . . F 2 36.089 33.924 41.245 1 19.32 ? C1C 072 2 B 1 HETATM 6 C C1D 072 . . . F 2 36.517 34.624 39.797 1 19.39 ? C1D 072 2 B 1 HETATM 7 O O1D 072 . . . F 2 37.752 34.784 39.775 1 15.65 ? O1D 072 2 B 1 HETATM 8 C C2A 072 . . . F 2 36.918 37.316 42.488 1 22.96 ? C2A 072 2 B 1 HETATM 9 C C2B 072 . . . F 2 36.504 38.809 42.864 1 23.8 ? C2B 072 2 B 1 HETATM 10 C C2C 072 . . . F 2 37.449 40.108 42.661 1 23.98 ? C2C 072 2 B 1 HETATM 11 C C2D 072 . . . F 2 36.914 41.491 42.033 1 24.41 ? C2D 072 2 B 1 HETATM 12 C C2E 072 . . . F 2 37.718 42.883 42.07 1 25.91 ? C2E 072 2 B 1 HETATM 13 C C2F 072 . . . F 2 38.916 43.237 41.065 1 26.2 ? C2F 072 2 B 1 HETATM 14 C C2G 072 . . . F 2 39.701 44.626 41.09 1 28.75 ? C2G 072 2 B 1 HETATM 15 C C2H 072 . . . F 2 41.014 44.897 41.938 1 30.95 ? C2H 072 2 B 1 HETATM 16 N N3A 072 . . . F 2 38.117 36.435 43.015 1 21.98 ? N3A 072 2 B 1 HETATM 17 C C3B 072 . . . F 2 39.669 36.8 42.827 1 24.24 ? C3B 072 2 B 1 HETATM 18 C C3C 072 . . . F 2 40.674 37.303 43.973 1 24.94 ? C3C 072 2 B 1 HETATM 19 C C3D 072 . . . F 2 41.411 36.37 45.016 1 27.25 ? C3D 072 2 B 1 HETATM 20 C C3E 072 . . . F 2 41.938 36.885 46.458 1 28.46 ? C3E 072 2 B 1 HETATM 21 C C3F 072 . . . F 2 43.462 37.296 46.755 1 29.16 ? C3F 072 2 B 1 HETATM 22 C C3G 072 . . . F 2 44.508 36.255 46.845 1 31.31 ? C3G 072 2 B 1 HETATM 23 C C3H 072 . . . F 2 43.881 38.695 46.948 1 28.15 ? C3H 072 2 B 1 HETATM 24 C C3I 072 . . . F 2 45.913 36.621 46.957 1 32.1 ? C3I 072 2 B 1 HETATM 25 C C3J 072 . . . F 2 45.286 39.047 47.058 1 29.83 ? C3J 072 2 B 1 HETATM 26 C C3K 072 . . . F 2 46.334 38.019 46.968 1 29.95 ? C3K 072 2 B 1 HETATM 27 C C3L 072 . . . F 2 47.761 38.36 46.792 1 29.43 ? C3L 072 2 B 1 HETATM 28 O O3M 072 . . . F 2 48.56 38.185 47.744 1 31.47 ? O3M 072 2 B 1 HETATM 29 O O3N 072 . . . F 2 48.186 38.783 45.681 1 26.92 ? O3N 072 2 B 1 HETATM 30 N N4A 072 . . . F 2 35.709 35.075 38.664 1 20.74 ? N4A 072 2 B 1 HETATM 31 C C4B 072 . . . F 2 36.356 35.974 37.541 1 18.76 ? C4B 072 2 B 1 HETATM 32 C C4C 072 . . . F 2 35.889 37.497 37.385 1 19.62 ? C4C 072 2 B 1 HETATM 33 C C4E 072 . . . F 2 35.337 37.978 36.122 1 20.06 ? C4E 072 2 B 1 HETATM 34 C C4D 072 . . . F 2 35.929 38.461 38.488 1 19.74 ? C4D 072 2 B 1 HETATM 35 C C4G 072 . . . F 2 34.923 39.362 35.956 1 19.85 ? C4G 072 2 B 1 HETATM 36 C C4F 072 . . . F 2 35.455 39.816 38.327 1 19.84 ? C4F 072 2 B 1 HETATM 37 C C4H 072 . . . F 2 34.956 40.253 37.063 1 18.85 ? C4H 072 2 B 1 HETATM 38 C C5B 072 . . . F 2 34.173 34.711 38.514 1 23.51 ? C5B 072 2 B 1 HETATM 39 C C5C 072 . . . F 2 33.924 33.293 37.819 1 27.41 ? C5C 072 2 B 1 HETATM 40 C C5D 072 . . . F 2 33.688 32.083 38.615 1 29.37 ? C5D 072 2 B 1 HETATM 41 C C5E 072 . . . F 2 33.858 33.176 36.352 1 27.71 ? C5E 072 2 B 1 HETATM 42 C C5F 072 . . . F 2 33.412 30.829 37.959 1 30.2 ? C5F 072 2 B 1 HETATM 43 C C5G 072 . . . F 2 33.578 31.923 35.725 1 26.97 ? C5G 072 2 B 1 HETATM 44 C C5H 072 . . . F 2 33.395 30.746 36.518 1 27.58 ? C5H 072 2 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 44 #