data_4PRG # _model_server_result.job_id CsDrwHuCFd_B0jqOJvlJwg _model_server_result.datetime_utc '2024-12-21 16:15:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4prg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":3}' # _entry.id 4PRG # _exptl.entry_id 4PRG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 614.837 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (+/-)(2S,5S)-3-(4-(4-CARBOXYPHENYL)BUTYL)-2-HEPTYL-4-OXO-5-THIAZOLIDINE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.57 _cell.angle_gamma 90 _cell.entry_id 4PRG _cell.length_a 92.72 _cell.length_b 61.54 _cell.length_c 118.81 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PRG _symmetry.cell_setting ? _symmetry.Int_Tables_number 3 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C37 H46 N2 O4 S' _chem_comp.formula_weight 614.837 _chem_comp.id 072 _chem_comp.mon_nstd_flag . _chem_comp.name (+/-)(2S,5S)-3-(4-(4-CARBOXYPHENYL)BUTYL)-2-HEPTYL-4-OXO-5-THIAZOLIDINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms THIAZOLIDINONE;GW0072 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S1B C1B 072 sing 1 n n S1B C2A 072 sing 2 n n C1A C1B 072 sing 3 n n C1A O1A 072 doub 4 n n C1A N3A 072 sing 5 n n C1B C1C 072 sing 6 n n C1B H1B 072 sing 7 n n C1C C1D 072 sing 8 n n C1C H1C1 072 sing 9 n n C1C H1C2 072 sing 10 n n C1D O1D 072 doub 11 n n C1D N4A 072 sing 12 n n C2A C2B 072 sing 13 n n C2A N3A 072 sing 14 n n C2A H2A 072 sing 15 n n C2B C2C 072 sing 16 n n C2B H2B1 072 sing 17 n n C2B H2B2 072 sing 18 n n C2C C2D 072 sing 19 n n C2C H2C1 072 sing 20 n n C2C H2C2 072 sing 21 n n C2D C2E 072 sing 22 n n C2D H2D1 072 sing 23 n n C2D H2D2 072 sing 24 n n C2E C2F 072 sing 25 n n C2E H2E1 072 sing 26 n n C2E H2E2 072 sing 27 n n C2F C2G 072 sing 28 n n C2F H2F1 072 sing 29 n n C2F H2F2 072 sing 30 n n C2G C2H 072 sing 31 n n C2G H2G1 072 sing 32 n n C2G H2G2 072 sing 33 n n C2H H2H1 072 sing 34 n n C2H H2H2 072 sing 35 n n C2H H2H3 072 sing 36 n n N3A C3B 072 sing 37 n n C3B C3C 072 sing 38 n n C3B H3B1 072 sing 39 n n C3B H3B2 072 sing 40 n n C3C C3D 072 sing 41 n n C3C H3C1 072 sing 42 n n C3C H3C2 072 sing 43 n n C3D C3E 072 sing 44 n n C3D H3D1 072 sing 45 n n C3D H3D2 072 sing 46 n n C3E C3F 072 sing 47 n n C3E H3E1 072 sing 48 n n C3E H3E2 072 sing 49 n n C3F C3G 072 doub 50 n y C3F C3H 072 sing 51 n y C3G C3I 072 sing 52 n y C3G H3G 072 sing 53 n n C3H C3J 072 doub 54 n y C3H H3H 072 sing 55 n n C3I C3K 072 doub 56 n y C3I H3I 072 sing 57 n n C3J C3K 072 sing 58 n y C3J H3J 072 sing 59 n n C3K C3L 072 sing 60 n n C3L O3M 072 sing 61 n n C3L O3N 072 doub 62 n n O3M HOM3 072 sing 63 n n N4A C4B 072 sing 64 n n N4A C5B 072 sing 65 n n C4B C4C 072 sing 66 n n C4B H4B1 072 sing 67 n n C4B H4B2 072 sing 68 n n C4C C4E 072 doub 69 n y C4C C4D 072 sing 70 n y C4E C4G 072 sing 71 n y C4E H4E 072 sing 72 n n C4D C4F 072 doub 73 n y C4D H4D 072 sing 74 n n C4G C4H 072 doub 75 n y C4G H4G 072 sing 76 n n C4F C4H 072 sing 77 n y C4F H4F 072 sing 78 n n C4H H4H 072 sing 79 n n C5B C5C 072 sing 80 n n C5B H5B1 072 sing 81 n n C5B H5B2 072 sing 82 n n C5C C5D 072 doub 83 n y C5C C5E 072 sing 84 n y C5D C5F 072 sing 85 n y C5D H5D 072 sing 86 n n C5E C5G 072 doub 87 n y C5E H5E 072 sing 88 n n C5F C5H 072 doub 89 n y C5F H5F 072 sing 90 n n C5G C5H 072 sing 91 n y C5G H5G 072 sing 92 n n C5H H5H 072 sing 93 n n # _atom_sites.entry_id 4PRG _atom_sites.fract_transf_matrix[1][1] 0.010785 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002405 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016249 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008623 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 72 A 1 1 1 72 72 . F 2 72 B 1 2 2 72 72 . G 2 72 C 1 3 3 72 72 . H 2 72 D 1 4 4 72 72 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1B 072 . . . G 2 63.106 91.566 9.914 1 9.88 ? S1B 072 3 C 1 HETATM 2 C C1A 072 . . . G 2 62.196 93.91 9.311 1 10.31 ? C1A 072 3 C 1 HETATM 3 C C1B 072 . . . G 2 61.652 92.576 9.829 1 10.29 ? C1B 072 3 C 1 HETATM 4 O O1A 072 . . . G 2 61.339 94.705 8.884 1 11.47 ? O1A 072 3 C 1 HETATM 5 C C1C 072 . . . G 2 60.815 92.584 11.164 1 7.42 ? C1C 072 3 C 1 HETATM 6 C C1D 072 . . . G 2 61.411 92.067 12.569 1 6.06 ? C1D 072 3 C 1 HETATM 7 O O1D 072 . . . G 2 62.116 92.949 13.098 1 2 ? O1D 072 3 C 1 HETATM 8 C C2A 072 . . . G 2 64.338 92.869 9.877 1 11.76 ? C2A 072 3 C 1 HETATM 9 C C2B 072 . . . G 2 65.589 92.342 9.065 1 14.13 ? C2B 072 3 C 1 HETATM 10 C C2C 072 . . . G 2 67.055 92.928 9.394 1 14.17 ? C2C 072 3 C 1 HETATM 11 C C2D 072 . . . G 2 68.039 92.336 10.511 1 13.42 ? C2D 072 3 C 1 HETATM 12 C C2E 072 . . . G 2 69.23 93.159 11.211 1 16.15 ? C2E 072 3 C 1 HETATM 13 C C2F 072 . . . G 2 70.375 94.011 10.453 1 16.71 ? C2F 072 3 C 1 HETATM 14 C C2G 072 . . . G 2 71.232 95.119 11.241 1 18.78 ? C2G 072 3 C 1 HETATM 15 C C2H 072 . . . G 2 72.188 96.116 10.53 1 17.96 ? C2H 072 3 C 1 HETATM 16 N N3A 072 . . . G 2 63.576 94.142 9.432 1 12.95 ? N3A 072 3 C 1 HETATM 17 C C3B 072 . . . G 2 64.13 95.622 9.6 1 15.37 ? C3B 072 3 C 1 HETATM 18 C C3C 072 . . . G 2 64.583 96.428 8.332 1 19.52 ? C3C 072 3 C 1 HETATM 19 C C3D 072 . . . G 2 63.543 97.195 7.415 1 23.09 ? C3D 072 3 C 1 HETATM 20 C C3E 072 . . . G 2 63.999 97.957 6.106 1 25.3 ? C3E 072 3 C 1 HETATM 21 C C3F 072 . . . G 2 64.887 99.312 6.2 1 27.64 ? C3F 072 3 C 1 HETATM 22 C C3G 072 . . . G 2 64.294 100.609 6.541 1 28.52 ? C3G 072 3 C 1 HETATM 23 C C3H 072 . . . G 2 66.242 99.326 5.641 1 29.84 ? C3H 072 3 C 1 HETATM 24 C C3I 072 . . . G 2 64.948 101.839 6.164 1 29.21 ? C3I 072 3 C 1 HETATM 25 C C3J 072 . . . G 2 66.92 100.561 5.34 1 30.57 ? C3J 072 3 C 1 HETATM 26 C C3K 072 . . . G 2 66.271 101.853 5.539 1 31.54 ? C3K 072 3 C 1 HETATM 27 C C3L 072 . . . G 2 66.869 103.11 4.989 1 35.23 ? C3L 072 3 C 1 HETATM 28 O O3M 072 . . . G 2 68.084 103.173 4.618 1 34.46 ? O3M 072 3 C 1 HETATM 29 O O3N 072 . . . G 2 66.128 104.112 4.809 1 39.82 ? O3N 072 3 C 1 HETATM 30 N N4A 072 . . . G 2 61.222 90.802 13.233 1 7.87 ? N4A 072 3 C 1 HETATM 31 C C4B 072 . . . G 2 62.318 90.241 14.289 1 12.44 ? C4B 072 3 C 1 HETATM 32 C C4C 072 . . . G 2 63.951 90.455 14.45 1 9.2 ? C4C 072 3 C 1 HETATM 33 C C4E 072 . . . G 2 64.582 90.284 15.778 1 10.86 ? C4E 072 3 C 1 HETATM 34 C C4D 072 . . . G 2 64.833 90.354 13.289 1 8.89 ? C4D 072 3 C 1 HETATM 35 C C4G 072 . . . G 2 65.977 89.881 15.901 1 10.86 ? C4G 072 3 C 1 HETATM 36 C C4F 072 . . . G 2 66.221 89.98 13.429 1 8.47 ? C4F 072 3 C 1 HETATM 37 C C4H 072 . . . G 2 66.792 89.743 14.723 1 9.74 ? C4H 072 3 C 1 HETATM 38 C C5B 072 . . . G 2 59.941 89.891 13.045 1 6.63 ? C5B 072 3 C 1 HETATM 39 C C5C 072 . . . G 2 58.724 89.917 14.056 1 2.79 ? C5C 072 3 C 1 HETATM 40 C C5D 072 . . . G 2 57.607 90.813 13.843 1 2 ? C5D 072 3 C 1 HETATM 41 C C5E 072 . . . G 2 58.609 88.904 15.101 1 2.39 ? C5E 072 3 C 1 HETATM 42 C C5F 072 . . . G 2 56.482 90.789 14.721 1 2.37 ? C5F 072 3 C 1 HETATM 43 C C5G 072 . . . G 2 57.475 88.891 15.998 1 2.44 ? C5G 072 3 C 1 HETATM 44 C C5H 072 . . . G 2 56.404 89.831 15.8 1 2.5 ? C5H 072 3 C 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 34 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 44 #