data_4PRJ # _model_server_result.job_id iw1E2Jx8a1zrhRRY8JOrYQ _model_server_result.datetime_utc '2024-11-08 08:41:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4prj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4PRJ # _exptl.entry_id 4PRJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 408.415 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[1-(3-cyanobenzyl)-1H-pyrazol-4-yl]-6-(1H-pyrazol-4-yl)-1H-indazole-3-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4PRJ _cell.length_a 81.973 _cell.length_b 81.973 _cell.length_c 163.005 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PRJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H16 N8 O' _chem_comp.formula_weight 408.415 _chem_comp.id 2VU _chem_comp.mon_nstd_flag . _chem_comp.name N-[1-(3-cyanobenzyl)-1H-pyrazol-4-yl]-6-(1H-pyrazol-4-yl)-1H-indazole-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N8 C7 2VU trip 1 n n C7 C5 2VU sing 2 n n N25 N27 2VU sing 3 n y N25 C24 2VU sing 4 n y N27 C18 2VU doub 5 n y C5 C4 2VU doub 6 n y C5 C6 2VU sing 7 n y C4 C3 2VU sing 8 n y C24 C23 2VU doub 9 n y C24 C19 2VU sing 10 n y C23 C22 2VU sing 11 n y C6 C1 2VU doub 12 n y C18 C19 2VU sing 13 n y C18 C16 2VU sing 14 n n N15 C16 2VU sing 15 n n N15 C12 2VU sing 16 n n C29 N30 2VU sing 17 n y C29 C28 2VU doub 18 n y C11 C12 2VU doub 19 n y C11 N10 2VU sing 20 n y C19 C20 2VU doub 21 n y C3 C9 2VU sing 22 n n C3 C2 2VU doub 23 n y C16 O17 2VU doub 24 n n C22 C28 2VU sing 25 n n C22 C21 2VU doub 26 n y N30 N32 2VU sing 27 n y C12 C13 2VU sing 28 n y C9 N10 2VU sing 29 n n C28 C33 2VU sing 30 n y C1 C2 2VU sing 31 n y N10 N14 2VU sing 32 n y C20 C21 2VU sing 33 n y N32 C33 2VU doub 34 n y C13 N14 2VU doub 35 n y C1 H1 2VU sing 36 n n C2 H2 2VU sing 37 n n C4 H3 2VU sing 38 n n C6 H4 2VU sing 39 n n C9 H5 2VU sing 40 n n C9 H6 2VU sing 41 n n C11 H7 2VU sing 42 n n C13 H8 2VU sing 43 n n N15 H9 2VU sing 44 n n C20 H10 2VU sing 45 n n C21 H11 2VU sing 46 n n C23 H12 2VU sing 47 n n N25 H13 2VU sing 48 n n C29 H14 2VU sing 49 n n N30 H15 2VU sing 50 n n C33 H16 2VU sing 51 n n # _atom_sites.entry_id 4PRJ _atom_sites.fract_transf_matrix[1][1] 0.012199 _atom_sites.fract_transf_matrix[1][2] 0.007043 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014086 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006135 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id 2VU _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 401 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id 2VU _pdbx_nonpoly_scheme.auth_mon_id DRG _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 2VU . . . B 2 48.355 19.211 25.974 1 85.52 ? C1 2VU 401 A 1 HETATM 2 C C2 2VU . . . B 2 48.667 19.055 24.623 1 83.14 ? C2 2VU 401 A 1 HETATM 3 C C3 2VU . . . B 2 49.997 18.881 24.238 1 83.66 ? C3 2VU 401 A 1 HETATM 4 C C4 2VU . . . B 2 51.013 18.87 25.186 1 87.98 ? C4 2VU 401 A 1 HETATM 5 C C5 2VU . . . B 2 50.714 19.009 26.549 1 90.99 ? C5 2VU 401 A 1 HETATM 6 C C6 2VU . . . B 2 49.368 19.197 26.935 1 89.33 ? C6 2VU 401 A 1 HETATM 7 C C7 2VU . . . B 2 51.796 18.971 27.498 1 93.92 ? C7 2VU 401 A 1 HETATM 8 N N8 2VU . . . B 2 52.678 18.937 28.222 1 95.47 ? N8 2VU 401 A 1 HETATM 9 C C9 2VU . . . B 2 50.36 18.687 22.788 1 79.52 ? C9 2VU 401 A 1 HETATM 10 N N10 2VU . . . B 2 50.784 17.31 22.51 1 75.5 ? N10 2VU 401 A 1 HETATM 11 C C11 2VU . . . B 2 51.022 16.825 21.274 1 72.88 ? C11 2VU 401 A 1 HETATM 12 C C12 2VU . . . B 2 51.392 15.529 21.395 1 70.53 ? C12 2VU 401 A 1 HETATM 13 C C13 2VU . . . B 2 51.371 15.206 22.763 1 70.27 ? C13 2VU 401 A 1 HETATM 14 N N14 2VU . . . B 2 51.005 16.262 23.426 1 72.98 ? N14 2VU 401 A 1 HETATM 15 N N15 2VU . . . B 2 51.718 14.699 20.305 1 70.01 ? N15 2VU 401 A 1 HETATM 16 C C16 2VU . . . B 2 52.274 13.471 20.399 1 69.62 ? C16 2VU 401 A 1 HETATM 17 O O17 2VU . . . B 2 52.518 12.95 21.475 1 70.23 ? O17 2VU 401 A 1 HETATM 18 C C18 2VU . . . B 2 52.562 12.731 19.159 1 69.06 ? C18 2VU 401 A 1 HETATM 19 C C19 2VU . . . B 2 52.943 11.317 19.071 1 69.55 ? C19 2VU 401 A 1 HETATM 20 C C20 2VU . . . B 2 53.174 10.287 19.996 1 67.55 ? C20 2VU 401 A 1 HETATM 21 C C21 2VU . . . B 2 53.497 9.035 19.549 1 68.36 ? C21 2VU 401 A 1 HETATM 22 C C22 2VU . . . B 2 53.643 8.782 18.17 1 71.36 ? C22 2VU 401 A 1 HETATM 23 C C23 2VU . . . B 2 53.424 9.802 17.242 1 72.02 ? C23 2VU 401 A 1 HETATM 24 C C24 2VU . . . B 2 53.066 11.081 17.679 1 71.03 ? C24 2VU 401 A 1 HETATM 25 N N25 2VU . . . B 2 52.768 12.271 17.063 1 69.64 ? N25 2VU 401 A 1 HETATM 26 N N27 2VU . . . B 2 52.473 13.174 17.924 1 68.93 ? N27 2VU 401 A 1 HETATM 27 C C28 2VU . . . B 2 53.968 7.406 17.706 1 74.66 ? C28 2VU 401 A 1 HETATM 28 C C29 2VU . . . B 2 53.486 6.806 16.574 1 76.64 ? C29 2VU 401 A 1 HETATM 29 N N30 2VU . . . B 2 53.976 5.555 16.525 1 77.6 ? N30 2VU 401 A 1 HETATM 30 N N32 2VU . . . B 2 54.767 5.365 17.663 1 76.91 ? N32 2VU 401 A 1 HETATM 31 C C33 2VU . . . B 2 54.763 6.456 18.377 1 75.43 ? C33 2VU 401 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 239 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 31 #