data_4PRZ
#
_model_server_result.job_id            dpIrcigpyxL6tjie5PRn0Q 
_model_server_result.datetime_utc      '2024-11-22 06:27:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4prz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":602}' 
#
_entry.id    4PRZ 
#
_exptl.entry_id    4PRZ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              152.235 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DITHIANE DIOL' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4PRZ 
_cell.length_a            62.145 
_cell.length_b            62.145 
_cell.length_c            129.383 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4PRZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B C ACE 1 B ACE 501 1_555 B N LEU 2 B LEU 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale2 B C THR 4 B THR 504 1_555 B N 1U8 5 B 1U8 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
#
_chem_comp.formula           'C4 H8 O2 S2' 
_chem_comp.formula_weight    152.235 
_chem_comp.id                DTD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DITHIANE DIOL' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S1 C1 DTD sing 126 n n 
S1 S4 DTD sing 127 n n 
C1 C2 DTD sing 128 n n 
C1 H11 DTD sing 129 n n 
C1 H12 DTD sing 130 n n 
C2 O2 DTD sing 131 n n 
C2 C3 DTD sing 132 n n 
C2 H21 DTD sing 133 n n 
O2 HO2 DTD sing 134 n n 
C3 O3 DTD sing 135 n n 
C3 C4 DTD sing 136 n n 
C3 H31 DTD sing 137 n n 
O3 HO3 DTD sing 138 n n 
C4 S4 DTD sing 139 n n 
C4 H41 DTD sing 140 n n 
C4 H42 DTD sing 141 n n 
#
_atom_sites.entry_id                     4PRZ 
_atom_sites.fract_transf_matrix[1][1]    0.016091 
_atom_sites.fract_transf_matrix[1][2]    0.00929 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018581 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007729 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 DTD A 1 601 601 DTD DTD . 
D 3 DTD A 1 602 602 DTD DTD . 
E 4 HOH A 1 701 701 HOH HOH . 
E 4 HOH A 2 702 702 HOH HOH . 
E 4 HOH A 3 703 703 HOH HOH . 
E 4 HOH A 4 704 704 HOH HOH . 
E 4 HOH A 5 705 705 HOH HOH . 
E 4 HOH A 6 706 706 HOH HOH . 
E 4 HOH A 7 707 707 HOH HOH . 
E 4 HOH A 8 708 708 HOH HOH . 
E 4 HOH A 9 709 709 HOH HOH . 
E 4 HOH A 10 710 710 HOH HOH . 
E 4 HOH A 11 711 711 HOH HOH . 
E 4 HOH A 12 712 712 HOH HOH . 
E 4 HOH A 13 713 713 HOH HOH . 
E 4 HOH A 14 714 714 HOH HOH . 
E 4 HOH A 15 715 715 HOH HOH . 
E 4 HOH A 16 716 716 HOH HOH . 
E 4 HOH A 17 717 717 HOH HOH . 
E 4 HOH A 18 718 718 HOH HOH . 
E 4 HOH A 19 719 719 HOH HOH . 
E 4 HOH A 20 720 720 HOH HOH . 
E 4 HOH A 21 721 721 HOH HOH . 
E 4 HOH A 22 722 722 HOH HOH . 
E 4 HOH A 23 723 723 HOH HOH . 
E 4 HOH A 24 724 724 HOH HOH . 
E 4 HOH A 25 725 725 HOH HOH . 
E 4 HOH A 26 726 726 HOH HOH . 
E 4 HOH A 27 727 727 HOH HOH . 
E 4 HOH A 28 728 728 HOH HOH . 
E 4 HOH A 29 729 729 HOH HOH . 
E 4 HOH A 30 730 730 HOH HOH . 
E 4 HOH A 31 731 731 HOH HOH . 
E 4 HOH A 32 732 732 HOH HOH . 
E 4 HOH A 33 733 733 HOH HOH . 
E 4 HOH A 34 734 734 HOH HOH . 
E 4 HOH A 35 735 735 HOH HOH . 
E 4 HOH A 36 736 736 HOH HOH . 
E 4 HOH A 37 737 737 HOH HOH . 
E 4 HOH A 38 738 739 HOH HOH . 
E 4 HOH A 39 739 740 HOH HOH . 
E 4 HOH A 40 740 741 HOH HOH . 
E 4 HOH A 41 741 742 HOH HOH . 
E 4 HOH A 42 742 743 HOH HOH . 
E 4 HOH A 43 743 744 HOH HOH . 
E 4 HOH A 44 744 745 HOH HOH . 
E 4 HOH A 45 745 746 HOH HOH . 
E 4 HOH A 46 746 747 HOH HOH . 
E 4 HOH A 47 747 748 HOH HOH . 
E 4 HOH A 48 748 749 HOH HOH . 
E 4 HOH A 49 749 750 HOH HOH . 
E 4 HOH A 50 750 751 HOH HOH . 
E 4 HOH A 51 751 752 HOH HOH . 
E 4 HOH A 52 752 753 HOH HOH . 
E 4 HOH A 53 753 754 HOH HOH . 
E 4 HOH A 54 754 755 HOH HOH . 
E 4 HOH A 55 755 756 HOH HOH . 
E 4 HOH A 56 756 757 HOH HOH . 
E 4 HOH A 57 757 760 HOH HOH . 
E 4 HOH A 58 758 761 HOH HOH . 
E 4 HOH A 59 759 762 HOH HOH . 
E 4 HOH A 60 760 763 HOH HOH . 
E 4 HOH A 61 761 764 HOH HOH . 
E 4 HOH A 62 762 765 HOH HOH . 
E 4 HOH A 63 763 766 HOH HOH . 
E 4 HOH A 64 764 767 HOH HOH . 
E 4 HOH A 65 765 768 HOH HOH . 
E 4 HOH A 66 766 769 HOH HOH . 
E 4 HOH A 67 767 771 HOH HOH . 
E 4 HOH A 68 768 772 HOH HOH . 
E 4 HOH A 69 769 773 HOH HOH . 
E 4 HOH A 70 770 774 HOH HOH . 
E 4 HOH A 71 771 775 HOH HOH . 
E 4 HOH A 72 772 776 HOH HOH . 
E 4 HOH A 73 773 777 HOH HOH . 
E 4 HOH A 74 774 778 HOH HOH . 
E 4 HOH A 75 775 779 HOH HOH . 
E 4 HOH A 76 776 780 HOH HOH . 
E 4 HOH A 77 777 781 HOH HOH . 
E 4 HOH A 78 778 782 HOH HOH . 
E 4 HOH A 79 779 783 HOH HOH . 
E 4 HOH A 80 780 784 HOH HOH . 
E 4 HOH A 81 781 785 HOH HOH . 
E 4 HOH A 82 782 786 HOH HOH . 
E 4 HOH A 83 783 787 HOH HOH . 
E 4 HOH A 84 784 789 HOH HOH . 
E 4 HOH A 85 785 790 HOH HOH . 
E 4 HOH A 86 786 791 HOH HOH . 
E 4 HOH A 87 787 792 HOH HOH . 
E 4 HOH A 88 788 793 HOH HOH . 
E 4 HOH A 89 789 794 HOH HOH . 
E 4 HOH A 90 790 795 HOH HOH . 
E 4 HOH A 91 791 796 HOH HOH . 
E 4 HOH A 92 792 797 HOH HOH . 
E 4 HOH A 93 793 798 HOH HOH . 
E 4 HOH A 94 794 799 HOH HOH . 
E 4 HOH A 95 795 800 HOH HOH . 
E 4 HOH A 96 796 801 HOH HOH . 
E 4 HOH A 97 797 802 HOH HOH . 
E 4 HOH A 98 798 803 HOH HOH . 
E 4 HOH A 99 799 804 HOH HOH . 
E 4 HOH A 100 800 805 HOH HOH . 
E 4 HOH A 101 801 806 HOH HOH . 
E 4 HOH A 102 802 807 HOH HOH . 
E 4 HOH A 103 803 808 HOH HOH . 
E 4 HOH A 104 804 809 HOH HOH . 
E 4 HOH A 105 805 810 HOH HOH . 
E 4 HOH A 106 806 811 HOH HOH . 
E 4 HOH A 107 807 812 HOH HOH . 
E 4 HOH A 108 808 813 HOH HOH . 
E 4 HOH A 109 809 814 HOH HOH . 
E 4 HOH A 110 810 815 HOH HOH . 
E 4 HOH A 111 811 816 HOH HOH . 
E 4 HOH A 112 812 817 HOH HOH . 
E 4 HOH A 113 813 818 HOH HOH . 
E 4 HOH A 114 814 819 HOH HOH . 
E 4 HOH A 115 815 820 HOH HOH . 
E 4 HOH A 116 816 821 HOH HOH . 
E 4 HOH A 117 817 822 HOH HOH . 
E 4 HOH A 118 818 823 HOH HOH . 
E 4 HOH A 119 819 824 HOH HOH . 
E 4 HOH A 120 820 825 HOH HOH . 
E 4 HOH A 121 821 826 HOH HOH . 
E 4 HOH A 122 822 827 HOH HOH . 
E 4 HOH A 123 823 828 HOH HOH . 
E 4 HOH A 124 824 829 HOH HOH . 
E 4 HOH A 125 825 830 HOH HOH . 
E 4 HOH A 126 826 831 HOH HOH . 
E 4 HOH A 127 827 832 HOH HOH . 
E 4 HOH A 128 828 833 HOH HOH . 
E 4 HOH A 129 829 834 HOH HOH . 
F 4 HOH B 1 601 738 HOH HOH . 
F 4 HOH B 2 602 758 HOH HOH . 
F 4 HOH B 3 603 759 HOH HOH . 
F 4 HOH B 4 604 770 HOH HOH . 
F 4 HOH B 5 605 788 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S1 DTD . . . D 3 66.734 69.23 145.712 1 41.48 ? S1 DTD 602 A 1 
HETATM 2 C C1 DTD . . . D 3 68.177 68.442 144.915 1 33.48 ? C1 DTD 602 A 1 
HETATM 3 C C2 DTD . . . D 3 69.512 69.155 145.196 1 38.28 ? C2 DTD 602 A 1 
HETATM 4 O O2 DTD . . . D 3 70.536 68.524 144.496 1 45.7 ? O2 DTD 602 A 1 
HETATM 5 C C3 DTD . . . D 3 69.884 69.094 146.712 1 49.38 ? C3 DTD 602 A 1 
HETATM 6 O O3 DTD . . . D 3 71.168 69.611 146.815 1 52.1 ? O3 DTD 602 A 1 
HETATM 7 C C4 DTD . . . D 3 68.955 69.932 147.61 1 42.54 ? C4 DTD 602 A 1 
HETATM 8 S S4 DTD . . . D 3 67.262 69.285 147.687 1 63.64 ? S4 DTD 602 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           8 
#