data_4PSQ # _model_server_result.job_id 2NqQTpp-EJflfCm9w_xdqQ _model_server_result.datetime_utc '2024-11-28 09:41:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4psq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":205}' # _entry.id 4PSQ # _exptl.entry_id 4PSQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 20 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4PSQ _cell.length_a 96.531 _cell.length_b 96.531 _cell.length_c 118.072 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PSQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,AA 1 1 B,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,BA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 O N N ? 4 P N N ? 4 Q N N ? 4 R N N ? 4 S N N ? 4 T N N ? 4 U N N ? 4 V N N ? 4 W N N ? 4 X N N ? 4 Y N N ? 4 Z N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 33 B CYS 4 1_555 A SG CYS 189 B CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf2 A SG CYS 99 B CYS 70 1_555 A SG CYS 203 B CYS 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf3 A SG CYS 149 B CYS 120 1_555 A SG CYS 158 B CYS 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf4 B SG CYS 33 A CYS 4 1_555 B SG CYS 189 A CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf5 B SG CYS 99 A CYS 70 1_555 B SG CYS 203 A CYS 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf6 B SG CYS 149 A CYS 120 1_555 B SG CYS 158 A CYS 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 134 n n C1 C2 EDO sing 135 n n C1 H11 EDO sing 136 n n C1 H12 EDO sing 137 n n O1 HO1 EDO sing 138 n n C2 O2 EDO sing 139 n n C2 H21 EDO sing 140 n n C2 H22 EDO sing 141 n n O2 HO2 EDO sing 142 n n # _atom_sites.entry_id 4PSQ _atom_sites.fract_transf_matrix[1][1] 0.010359 _atom_sites.fract_transf_matrix[1][2] 0.005981 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011962 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008469 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 2WL B 1 201 2 2WL LIG . D 3 PO4 B 1 202 2 PO4 PO4 . E 4 EDO B 1 203 3 EDO EDO . F 4 EDO B 1 204 4 EDO EDO . G 4 EDO B 1 205 7 EDO EDO . H 4 EDO B 1 206 13 EDO EDO . I 4 EDO B 1 207 14 EDO EDO . J 4 EDO B 1 208 15 EDO EDO . K 4 EDO B 1 209 17 EDO EDO . L 4 EDO B 1 210 18 EDO EDO . M 2 2WL A 1 201 1 2WL LIG . N 3 PO4 A 1 202 1 PO4 PO4 . O 4 EDO A 1 203 1 EDO EDO . P 4 EDO A 1 204 2 EDO EDO . Q 4 EDO A 1 205 5 EDO EDO . R 4 EDO A 1 206 6 EDO EDO . S 4 EDO A 1 207 8 EDO EDO . T 4 EDO A 1 208 9 EDO EDO . U 4 EDO A 1 209 10 EDO EDO . V 4 EDO A 1 210 11 EDO EDO . W 4 EDO A 1 211 12 EDO EDO . X 4 EDO A 1 212 19 EDO EDO . Y 4 EDO A 1 213 20 EDO EDO . Z 4 EDO A 1 214 21 EDO EDO . AA 5 HOH B 1 301 1 HOH HOH . AA 5 HOH B 2 302 2 HOH HOH . AA 5 HOH B 3 303 3 HOH HOH . AA 5 HOH B 4 304 7 HOH HOH . AA 5 HOH B 5 305 9 HOH HOH . AA 5 HOH B 6 306 10 HOH HOH . AA 5 HOH B 7 307 11 HOH HOH . AA 5 HOH B 8 308 12 HOH HOH . AA 5 HOH B 9 309 13 HOH HOH . AA 5 HOH B 10 310 16 HOH HOH . AA 5 HOH B 11 311 17 HOH HOH . AA 5 HOH B 12 312 19 HOH HOH . AA 5 HOH B 13 313 20 HOH HOH . AA 5 HOH B 14 314 21 HOH HOH . AA 5 HOH B 15 315 22 HOH HOH . AA 5 HOH B 16 316 37 HOH HOH . AA 5 HOH B 17 317 38 HOH HOH . AA 5 HOH B 18 318 52 HOH HOH . AA 5 HOH B 19 319 56 HOH HOH . AA 5 HOH B 20 320 61 HOH HOH . AA 5 HOH B 21 321 64 HOH HOH . AA 5 HOH B 22 322 65 HOH HOH . AA 5 HOH B 23 323 66 HOH HOH . AA 5 HOH B 24 324 68 HOH HOH . AA 5 HOH B 25 325 69 HOH HOH . AA 5 HOH B 26 326 76 HOH HOH . AA 5 HOH B 27 327 79 HOH HOH . AA 5 HOH B 28 328 86 HOH HOH . AA 5 HOH B 29 329 88 HOH HOH . AA 5 HOH B 30 330 89 HOH HOH . AA 5 HOH B 31 331 92 HOH HOH . AA 5 HOH B 32 332 93 HOH HOH . AA 5 HOH B 33 333 94 HOH HOH . AA 5 HOH B 34 334 95 HOH HOH . AA 5 HOH B 35 335 113 HOH HOH . AA 5 HOH B 36 336 114 HOH HOH . AA 5 HOH B 37 337 115 HOH HOH . AA 5 HOH B 38 338 116 HOH HOH . AA 5 HOH B 39 339 117 HOH HOH . AA 5 HOH B 40 340 123 HOH HOH . AA 5 HOH B 41 341 124 HOH HOH . AA 5 HOH B 42 342 125 HOH HOH . AA 5 HOH B 43 343 126 HOH HOH . AA 5 HOH B 44 344 130 HOH HOH . AA 5 HOH B 45 345 131 HOH HOH . AA 5 HOH B 46 346 134 HOH HOH . AA 5 HOH B 47 347 137 HOH HOH . AA 5 HOH B 48 348 139 HOH HOH . AA 5 HOH B 49 349 142 HOH HOH . AA 5 HOH B 50 350 145 HOH HOH . AA 5 HOH B 51 351 148 HOH HOH . AA 5 HOH B 52 352 149 HOH HOH . AA 5 HOH B 53 353 150 HOH HOH . AA 5 HOH B 54 354 154 HOH HOH . AA 5 HOH B 55 355 155 HOH HOH . AA 5 HOH B 56 356 158 HOH HOH . AA 5 HOH B 57 357 162 HOH HOH . AA 5 HOH B 58 358 163 HOH HOH . AA 5 HOH B 59 359 165 HOH HOH . AA 5 HOH B 60 360 167 HOH HOH . AA 5 HOH B 61 361 168 HOH HOH . AA 5 HOH B 62 362 169 HOH HOH . AA 5 HOH B 63 363 170 HOH HOH . AA 5 HOH B 64 364 171 HOH HOH . AA 5 HOH B 65 365 191 HOH HOH . AA 5 HOH B 66 366 194 HOH HOH . AA 5 HOH B 67 367 199 HOH HOH . AA 5 HOH B 68 368 200 HOH HOH . AA 5 HOH B 69 369 202 HOH HOH . AA 5 HOH B 70 370 209 HOH HOH . AA 5 HOH B 71 371 210 HOH HOH . AA 5 HOH B 72 372 214 HOH HOH . AA 5 HOH B 73 373 233 HOH HOH . BA 5 HOH A 1 301 24 HOH HOH . BA 5 HOH A 2 302 25 HOH HOH . BA 5 HOH A 3 303 26 HOH HOH . BA 5 HOH A 4 304 27 HOH HOH . BA 5 HOH A 5 305 28 HOH HOH . BA 5 HOH A 6 306 29 HOH HOH . BA 5 HOH A 7 307 32 HOH HOH . BA 5 HOH A 8 308 33 HOH HOH . BA 5 HOH A 9 309 35 HOH HOH . BA 5 HOH A 10 310 36 HOH HOH . BA 5 HOH A 11 311 39 HOH HOH . BA 5 HOH A 12 312 40 HOH HOH . BA 5 HOH A 13 313 41 HOH HOH . BA 5 HOH A 14 314 42 HOH HOH . BA 5 HOH A 15 315 43 HOH HOH . BA 5 HOH A 16 316 44 HOH HOH . BA 5 HOH A 17 317 46 HOH HOH . BA 5 HOH A 18 318 47 HOH HOH . BA 5 HOH A 19 319 51 HOH HOH . BA 5 HOH A 20 320 53 HOH HOH . BA 5 HOH A 21 321 63 HOH HOH . BA 5 HOH A 22 322 67 HOH HOH . BA 5 HOH A 23 323 71 HOH HOH . BA 5 HOH A 24 324 74 HOH HOH . BA 5 HOH A 25 325 75 HOH HOH . BA 5 HOH A 26 326 82 HOH HOH . BA 5 HOH A 27 327 85 HOH HOH . BA 5 HOH A 28 328 97 HOH HOH . BA 5 HOH A 29 329 98 HOH HOH . BA 5 HOH A 30 330 102 HOH HOH . BA 5 HOH A 31 331 103 HOH HOH . BA 5 HOH A 32 332 106 HOH HOH . BA 5 HOH A 33 333 108 HOH HOH . BA 5 HOH A 34 334 110 HOH HOH . BA 5 HOH A 35 335 112 HOH HOH . BA 5 HOH A 36 336 120 HOH HOH . BA 5 HOH A 37 337 128 HOH HOH . BA 5 HOH A 38 338 129 HOH HOH . BA 5 HOH A 39 339 136 HOH HOH . BA 5 HOH A 40 340 140 HOH HOH . BA 5 HOH A 41 341 141 HOH HOH . BA 5 HOH A 42 342 174 HOH HOH . BA 5 HOH A 43 343 175 HOH HOH . BA 5 HOH A 44 344 176 HOH HOH . BA 5 HOH A 45 345 178 HOH HOH . BA 5 HOH A 46 346 179 HOH HOH . BA 5 HOH A 47 347 182 HOH HOH . BA 5 HOH A 48 348 183 HOH HOH . BA 5 HOH A 49 349 184 HOH HOH . BA 5 HOH A 50 350 185 HOH HOH . BA 5 HOH A 51 351 186 HOH HOH . BA 5 HOH A 52 352 188 HOH HOH . BA 5 HOH A 53 353 189 HOH HOH . BA 5 HOH A 54 354 190 HOH HOH . BA 5 HOH A 55 355 192 HOH HOH . BA 5 HOH A 56 356 196 HOH HOH . BA 5 HOH A 57 357 205 HOH HOH . BA 5 HOH A 58 358 207 HOH HOH . BA 5 HOH A 59 359 212 HOH HOH . BA 5 HOH A 60 360 219 HOH HOH . BA 5 HOH A 61 361 220 HOH HOH . BA 5 HOH A 62 362 221 HOH HOH . BA 5 HOH A 63 363 222 HOH HOH . BA 5 HOH A 64 364 224 HOH HOH . BA 5 HOH A 65 365 226 HOH HOH . BA 5 HOH A 66 366 229 HOH HOH . BA 5 HOH A 67 367 231 HOH HOH . BA 5 HOH A 68 368 232 HOH HOH . BA 5 HOH A 69 369 234 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . Q 4 67.465 14.709 7.624 1 44.79 ? C1 EDO 205 A 1 HETATM 2 O O1 EDO . . . Q 4 67.037 15.953 8.186 1 44.6 ? O1 EDO 205 A 1 HETATM 3 C C2 EDO . . . Q 4 66.812 13.549 8.358 1 44.68 ? C2 EDO 205 A 1 HETATM 4 O O2 EDO . . . Q 4 65.528 13.273 7.783 1 45.01 ? O2 EDO 205 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 357 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #