data_4PV1 # _model_server_result.job_id XtQPyCrE73g5S7P-8JAFNQ _model_server_result.datetime_utc '2024-11-06 03:07:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4pv1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"BA","auth_seq_id":101}' # _entry.id 4PV1 # _exptl.entry_id 4PV1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 536.873 _entity.id 20 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-CAROTENE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4PV1 _cell.length_a 159.085 _cell.length_b 159.085 _cell.length_c 361.322 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PV1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexadecameric _pdbx_struct_assembly.oligomeric_count 16 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_565 x,x-y+1,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -79.5425 137.771651 60.220333 # _struct_asym.details ? _struct_asym.entity_id 20 _struct_asym.id BA _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 113 D CYS 113 1_555 D SG CYS 128 D CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? covale ? covale1 C SG CYS 25 C CYS 25 1_555 W CAC HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.814 ? metalc ? metalc1 A NE2 HIS 86 A HIS 86 1_555 K FE HEC . A HEC 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc2 A NE2 HIS 100 A HIS 100 1_555 L FE HEC . A HEC 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc3 A NE2 HIS 187 A HIS 187 1_555 K FE HEC . A HEC 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc4 A NE2 HIS 202 A HIS 202 1_555 L FE HEC . A HEC 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc5 M FE HEC . A HEC 305 1_555 P O8 SMA . A SMA 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc6 M FE HEC . A HEC 305 1_555 CA O HOH . A HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc7 U MG CLA . B CLA 204 1_555 DA O HOH . B HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc8 C N TYR 1 C TYR 1 1_555 W FE HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc9 C NE2 HIS 26 C HIS 26 1_555 W FE HEC . C HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc10 D SG CYS 108 D CYS 108 1_555 X FE1 FES . D FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc11 D ND1 HIS 110 D HIS 110 1_555 X FE2 FES . D FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc12 D SG CYS 126 D CYS 126 1_555 X FE1 FES . D FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc13 D ND1 HIS 129 D HIS 129 1_555 X FE2 FES . D FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? # _chem_comp.formula 'C40 H56' _chem_comp.formula_weight 536.873 _chem_comp.id BCR _chem_comp.mon_nstd_flag . _chem_comp.name BETA-CAROTENE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BCR sing 219 n n C1 C6 BCR sing 220 n n C1 C31 BCR sing 221 n n C1 C32 BCR sing 222 n n C2 C3 BCR sing 223 n n C2 HC21 BCR sing 224 n n C2 HC22 BCR sing 225 n n C3 C4 BCR sing 226 n n C3 HC31 BCR sing 227 n n C3 HC32 BCR sing 228 n n C4 C5 BCR sing 229 n n C4 HC41 BCR sing 230 n n C4 HC42 BCR sing 231 n n C5 C6 BCR doub 232 n n C5 C33 BCR sing 233 n n C6 C7 BCR sing 234 n n C7 C8 BCR doub 235 e n C7 HC7 BCR sing 236 n n C8 C9 BCR sing 237 n n C8 HC8 BCR sing 238 n n C9 C10 BCR doub 239 e n C9 C34 BCR sing 240 n n C10 C11 BCR sing 241 n n C10 H10C BCR sing 242 n n C11 C12 BCR doub 243 e n C11 H11C BCR sing 244 n n C33 H331 BCR sing 245 n n C33 H332 BCR sing 246 n n C33 H333 BCR sing 247 n n C31 H311 BCR sing 248 n n C31 H312 BCR sing 249 n n C31 H313 BCR sing 250 n n C32 H321 BCR sing 251 n n C32 H322 BCR sing 252 n n C32 H323 BCR sing 253 n n C34 H341 BCR sing 254 n n C34 H342 BCR sing 255 n n C34 H343 BCR sing 256 n n C12 C13 BCR sing 257 n n C12 H12C BCR sing 258 n n C13 C14 BCR doub 259 e n C13 C35 BCR sing 260 n n C14 C15 BCR sing 261 n n C14 H14C BCR sing 262 n n C15 C16 BCR doub 263 e n C15 H15C BCR sing 264 n n C16 C17 BCR sing 265 n n C16 H16C BCR sing 266 n n C17 C18 BCR doub 267 e n C17 H17C BCR sing 268 n n C18 C19 BCR sing 269 n n C18 C36 BCR sing 270 n n C19 C20 BCR doub 271 e n C19 H19C BCR sing 272 n n C20 C21 BCR sing 273 n n C20 H20C BCR sing 274 n n C21 C22 BCR doub 275 e n C21 H21C BCR sing 276 n n C22 C23 BCR sing 277 n n C22 C37 BCR sing 278 n n C23 C24 BCR doub 279 e n C23 H23C BCR sing 280 n n C24 C25 BCR sing 281 n n C24 H24C BCR sing 282 n n C25 C26 BCR doub 283 n n C25 C30 BCR sing 284 n n C26 C27 BCR sing 285 n n C26 C38 BCR sing 286 n n C27 C28 BCR sing 287 n n C27 H271 BCR sing 288 n n C27 H272 BCR sing 289 n n C28 C29 BCR sing 290 n n C28 H281 BCR sing 291 n n C28 H282 BCR sing 292 n n C29 C30 BCR sing 293 n n C29 H291 BCR sing 294 n n C29 H292 BCR sing 295 n n C30 C39 BCR sing 296 n n C30 C40 BCR sing 297 n n C35 H351 BCR sing 298 n n C35 H352 BCR sing 299 n n C35 H353 BCR sing 300 n n C36 H361 BCR sing 301 n n C36 H362 BCR sing 302 n n C36 H363 BCR sing 303 n n C37 H371 BCR sing 304 n n C37 H372 BCR sing 305 n n C37 H373 BCR sing 306 n n C38 H381 BCR sing 307 n n C38 H382 BCR sing 308 n n C38 H383 BCR sing 309 n n C39 H391 BCR sing 310 n n C39 H392 BCR sing 311 n n C39 H393 BCR sing 312 n n C40 H401 BCR sing 313 n n C40 H402 BCR sing 314 n n C40 H403 BCR sing 315 n n # _atom_sites.entry_id 4PV1 _atom_sites.fract_transf_matrix[1][1] 0.006286 _atom_sites.fract_transf_matrix[1][2] 0.003629 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007258 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002768 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 9 MYS A 1 301 301 MYS MYS . J 10 CD A 1 302 302 CD CD . K 11 HEC A 1 303 303 HEC HEM . L 11 HEC A 1 304 304 HEC HEM . M 11 HEC A 1 305 305 HEC HEM . N 12 UMQ A 1 306 306 UMQ UMQ . O 12 UMQ A 1 307 307 UMQ UMQ . P 13 SMA A 1 308 308 SMA SMA . Q 14 7PH A 1 309 309 7PH 7PH . R 15 8K6 B 1 201 201 8K6 8K6 . S 10 CD B 1 202 202 CD CD . T 12 UMQ B 1 203 203 UMQ UMQ . U 16 CLA B 1 204 204 CLA CLA . V 17 OPC B 1 205 205 OPC OPC . W 11 HEC C 1 301 301 HEC HEM . X 18 FES D 1 201 201 FES FES . Y 19 SQD D 1 202 202 SQD SQD . Z 17 OPC D 1 203 203 OPC OPC . AA 17 OPC E 1 101 101 OPC OPC . BA 20 BCR G 1 101 101 BCR BCR . CA 21 HOH A 1 401 401 HOH HOH . CA 21 HOH A 2 402 402 HOH HOH . CA 21 HOH A 3 403 403 HOH HOH . CA 21 HOH A 4 404 404 HOH HOH . CA 21 HOH A 5 405 405 HOH HOH . CA 21 HOH A 6 406 406 HOH HOH . CA 21 HOH A 7 407 407 HOH HOH . CA 21 HOH A 8 408 408 HOH HOH . DA 21 HOH B 1 301 301 HOH HOH . DA 21 HOH B 2 302 302 HOH HOH . DA 21 HOH B 3 303 303 HOH HOH . DA 21 HOH B 4 304 304 HOH HOH . DA 21 HOH B 5 305 305 HOH HOH . EA 21 HOH C 1 1101 1101 HOH HOH . EA 21 HOH C 2 1102 1102 HOH HOH . FA 21 HOH G 1 201 201 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BCR . . . BA 20 -37.017 81.429 4.115 1 75.46 ? C1 BCR 101 G 1 HETATM 2 C C2 BCR . . . BA 20 -37.656 82.533 4.931 1 57.61 ? C2 BCR 101 G 1 HETATM 3 C C3 BCR . . . BA 20 -38.396 81.979 6.115 1 79.4 ? C3 BCR 101 G 1 HETATM 4 C C4 BCR . . . BA 20 -39.453 80.984 5.705 1 62.19 ? C4 BCR 101 G 1 HETATM 5 C C5 BCR . . . BA 20 -39.025 80.107 4.593 1 69.87 ? C5 BCR 101 G 1 HETATM 6 C C6 BCR . . . BA 20 -37.922 80.274 3.873 1 86.18 ? C6 BCR 101 G 1 HETATM 7 C C7 BCR . . . BA 20 -37.574 79.371 2.778 1 97.16 ? C7 BCR 101 G 1 HETATM 8 C C8 BCR . . . BA 20 -36.746 78.341 2.939 1 80.9 ? C8 BCR 101 G 1 HETATM 9 C C9 BCR . . . BA 20 -36.883 77.091 2.215 1 83.4 ? C9 BCR 101 G 1 HETATM 10 C C10 BCR . . . BA 20 -36.167 76.876 1.104 1 91.85 ? C10 BCR 101 G 1 HETATM 11 C C11 BCR . . . BA 20 -35.489 77.878 0.317 1 97.72 ? C11 BCR 101 G 1 HETATM 12 C C33 BCR . . . BA 20 -39.935 78.973 4.352 1 77.94 ? C33 BCR 101 G 1 HETATM 13 C C31 BCR . . . BA 20 -35.752 81.01 4.833 1 76.02 ? C31 BCR 101 G 1 HETATM 14 C C32 BCR . . . BA 20 -36.628 82.035 2.785 0 74.55 ? C32 BCR 101 G 1 HETATM 15 C C34 BCR . . . BA 20 -37.759 76.048 2.781 1 81.11 ? C34 BCR 101 G 1 HETATM 16 C C12 BCR . . . BA 20 -34.877 77.472 -0.801 1 98.92 ? C12 BCR 101 G 1 HETATM 17 C C13 BCR . . . BA 20 -34.207 78.309 -1.77 1 92.26 ? C13 BCR 101 G 1 HETATM 18 C C14 BCR . . . BA 20 -33.847 77.752 -2.934 1 93.31 ? C14 BCR 101 G 1 HETATM 19 C C15 BCR . . . BA 20 -33.102 78.417 -3.971 1 91.69 ? C15 BCR 101 G 1 HETATM 20 C C16 BCR . . . BA 20 -32.797 77.755 -5.095 1 91.59 ? C16 BCR 101 G 1 HETATM 21 C C17 BCR . . . BA 20 -31.915 78.359 -6.059 1 83.75 ? C17 BCR 101 G 1 HETATM 22 C C18 BCR . . . BA 20 -31.459 77.775 -7.173 1 90.76 ? C18 BCR 101 G 1 HETATM 23 C C19 BCR . . . BA 20 -30.639 78.549 -8.085 1 96.54 ? C19 BCR 101 G 1 HETATM 24 C C20 BCR . . . BA 20 -30.313 78.119 -9.304 1 107.08 ? C20 BCR 101 G 1 HETATM 25 C C21 BCR . . . BA 20 -29.165 78.694 -9.964 1 107.62 ? C21 BCR 101 G 1 HETATM 26 C C22 BCR . . . BA 20 -29.147 79.223 -11.193 0 96.21 ? C22 BCR 101 G 1 HETATM 27 C C23 BCR . . . BA 20 -27.967 79.972 -11.603 0 88.21 ? C23 BCR 101 G 1 HETATM 28 C C24 BCR . . . BA 20 -27.92 80.711 -12.713 0 82.59 ? C24 BCR 101 G 1 HETATM 29 C C25 BCR . . . BA 20 -26.933 81.75 -12.977 0 77.93 ? C25 BCR 101 G 1 HETATM 30 C C26 BCR . . . BA 20 -27.086 82.993 -12.512 0 76.03 ? C26 BCR 101 G 1 HETATM 31 C C27 BCR . . . BA 20 -26.156 84.125 -12.717 0 75.3 ? C27 BCR 101 G 1 HETATM 32 C C28 BCR . . . BA 20 -24.81 83.667 -13.218 0 75.04 ? C28 BCR 101 G 1 HETATM 33 C C29 BCR . . . BA 20 -24.989 82.608 -14.275 0 75.15 ? C29 BCR 101 G 1 HETATM 34 C C30 BCR . . . BA 20 -25.742 81.379 -13.793 0 75.79 ? C30 BCR 101 G 1 HETATM 35 C C35 BCR . . . BA 20 -33.73 79.654 -1.392 1 74.09 ? C35 BCR 101 G 1 HETATM 36 C C36 BCR . . . BA 20 -31.877 76.419 -7.573 1 79.12 ? C36 BCR 101 G 1 HETATM 37 C C37 BCR . . . BA 20 -30.377 79.303 -12.007 0 93.75 ? C37 BCR 101 G 1 HETATM 38 C C38 BCR . . . BA 20 -28.253 83.398 -11.705 0 75.54 ? C38 BCR 101 G 1 HETATM 39 C C39 BCR . . . BA 20 -24.832 80.448 -13.011 0 75.28 ? C39 BCR 101 G 1 HETATM 40 C C40 BCR . . . BA 20 -26.146 80.628 -15.056 0 75.28 ? C40 BCR 101 G 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 211 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 40 #